Oncorhynchus tshawytscha (Chinook salmon): 112214291
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Entry
112214291 CDS
T05605
Name
(RefSeq) caprin-2-like isoform X2
KO
K18744
caprin-2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112214291
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
112214291
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Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
BclA_C
Motif
Other DBs
NCBI-GeneID:
112214291
NCBI-ProteinID:
XP_024228704
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Position
LG15:complement(6664851..6672557)
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AA seq
920 aa
AA seq
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MVQLSPSPARDVSPSPECSEKGRQGSPKIGSPGGLSPLQLALAASTTIYQGYESYIEDGL
ICLKHKIRNLEKKKIKLEDYRKRLKHGESLNQDQIDAVEKYDEVIHNLQFAQELHKTLGG
LTQELLKAQKKALRKEQMVKQEVERRRLCIVLQVKFLLQTLLQHEHIRKDLLSARNPQLK
VAELHSLLELAELLGVKRDNNVSLEDQMDRAALVYLDLLEGKNKAVAGSTYKVLKAKLAT
LMDCGYFDCVPPPPTKSPKEVEDPMTKKTVSETASLSTLMMSNKKDVPSREFLNRHYLPD
TDPNGCRDTPVTPNWKAEFQAMKEQEPPDSWDMESDSTQPVIQKPWRGAAVLISKVPVTS
KKQNAEPKQRRAKSKRERDATAALRVDTPVEVFNSQSSLPKDPILRKQQLEDLMTKIRGS
FSFMQDSLLDGEGSPTNGHPRLGRHASGSPSPLVQRDSRRSPVDLLPKTLHSTPLLSKLL
PVDDEPSLTNGDGGCLESCDLDLTTEDLAHVIAIDPCLLLSESETACPSPPAPPPLYRRE
SSISITLDEKTSARTPISESGKQSPCNGVVPPCTPTQGQPFSTPPSRRTLTMAPPVPFQT
MHSVFKVNAPLLPTVDFKSDIIPYSDSNGLCYVTTSTQTPPEFAPSEDEQLQSVNQSECL
VGSGGQIFLSPGQSCGTMGRSDQSYYRGSVRGGSFIPQAHLYGARDIGYQHSYRRGGGNT
GQRHNNSGWSDSSQVSSPDREGNYSLVDSAHGDSLQGVGMDLTTQVTPHAPHTLMHVPMY
PLPQHPQPLRVAFTAARTANYTPGTLDQPIAFDQLHSNLGEMFNTNVGRFTCPANGTYVF
LFHILKLAVNVPLYVNLMRNDEVMVSAYANDGAPDHETASNHSILQLYQGDQVWLRLHRG
SIYGSSWKYSTFSGFLLYQD
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctttctccatccccagcccgggatgtctctccttcacctgagtgctcagag
aaggggaggcaggggagccccaagattggctcccctggtggactgagtcctctccagctg
gccctggcagcctccaccaccatttaccagggctacgagagttacatcgaggacggcctc
atctgcctcaagcacaagatccgcaacctggagaaaaagaagattaaattggaagactac
aggaagcgtttgaaacacggggaatcactcaatcaagaccagatagatgcagtggagaag
tatgacgaagtgatccacaacctgcagtttgcccaggagctgcacaagacccttggtggc
ctaacacaggaactgctaaaggcccagaagaaggcgttgaggaaggagcagatggtcaag
caggaggttgagaggagaaggctgtgcatagtactgcaggttaagttcctcctgcagacc
ctgctgcagcacgagcacatcaggaaggacctcctctctgcccgcaacccccagctcaag
gttgcagagctacatagcctgcttgagcttgctgaactactgggggtgaagagggacaac
aatgtgagtttggaggatcagatggacagagcagccctggtctacctggacctgctggag
gggaaaaataaagccgtagccggaagcacctataaggtcctgaaggctaagttggcgacg
ctgatggattgtgggtactttgattgtgtaccgccgccaccgaccaagagtcccaaggaa
gtggaggatcccatgaccaagaagacggtgtctgaaacagccagcctctctaccctaatg
atgtcaaacaaaaaagacgtgcctagcagagagtttcttaacagacactacctgcctgac
acagaccccaatgggtgtcgagacactcccgttactccgaactggaaggctgagttccag
gctatgaaggaacaggagccaccggactcatgggatatggagtccgactccactcagcct
gtaatccagaaaccatggagaggggcggctgtgttaatctccaaagttccagttacctcc
aagaaacaaaatgccgaacccaaacagagaagagcgaagtccaaaagggagcgggacgcc
acagctgcacttcgtgtggacacccctgtggaggtgttcaactcccagtcttccttgccc
aaggaccccatcctgcgcaaacagcagctggaggacctgatgaccaagatcagaggctcc
ttcagcttcatgcaggattctcttctggatggagaaggatcacccactaacggccatcct
agactgggccggcatgcctctggatccccctctccactcgtacagagagattcgaggaga
agcccagtggaccttctccccaaaacactgcattccactccattgctttctaaactcctc
cctgttgatgatgaacccagtctgaccaatggagacgggggttgtctagagagctgtgac
ctggacctgactacagaggacctggctcacgtcatagccattgatccatgtctgctgctg
tctgagagtgagactgcctgcccctctcctccagctcctcctcccctctaccgtagggag
tcctccatctccatcaccctggacgagaagacatctgctcggactcccatctctgaatcc
ggtaagcaatccccctgtaacggggtggtgcctccttgtacccccacccaagggcagccc
ttttcaacccctcccagcagacgtacactcaccatggcgccccctgttcccttccagacc
atgcattcggtcttcaaggtgaacgcccccttacttccgactgtagactttaaatccgat
attatcccctattcggactccaacggcctgtgctatgtcaccaccagcacccagacccca
ccggagtttgctccgtcggaggacgaacaactacagtcggtgaaccagtctgaatgtctg
gtaggtagtggtgggcagatcttcctgtcccctggccaatcgtgtggcaccatgggccgt
tctgaccaatcatactacagaggatctgttagaggaggaagcttcatcccccaggctcac
ctttacggcgctcgggacattggctaccaacacagctacaggcgcggtggaggcaataca
ggacaaaggcacaataatagtggttggagtgactcttcccaggtgagcagcccagaccgg
gagggcaactactccctggtggactctgcccacggtgactcgctgcagggtgttggcatg
gacctcaccacccaggtgacccctcatgccccccacaccctgatgcacgtacccatgtac
ccgctcccccagcatccccagcccctccgcgtggccttcacagcagcccgcacagccaac
tacaccccgggcaccctggaccagcccatcgccttcgaccagctccacagcaacctgggg
gaaatgttcaacaccaacgtgggtcgtttcacctgcccagccaacggcacctacgtcttc
ctcttccacatcctcaagctggcggtcaatgtgccgctctacgtcaacctgatgcgcaac
gacgaggtgatggtgtctgcgtacgccaacgacggggctccggaccacgagacggccagc
aaccactccatcctgcagctgtaccagggagaccaggtgtggctgcggctgcaccgcggc
tccatctatggcagcagctggaagtacagcacattctctggcttcctgctctaccaggac
tga
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