Oncorhynchus tshawytscha (Chinook salmon): 112214294
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Entry
112214294 CDS
T05605
Name
(RefSeq) DENN domain-containing protein 5B-like isoform X7
KO
K20164
DENN domain-containing protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112214294
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112214294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
RUN
uDENN
dDENN
PLAT
DGCR6
PAP1
Motif
Other DBs
NCBI-GeneID:
112214294
NCBI-ProteinID:
XP_024228711
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All DBs
Position
LG15:complement(6693123..6765390)
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AA seq
1306 aa
AA seq
DB search
MSGTNATSGAAPCRFAHYFVICGIDTETGLEPDELAALYQWLEADRQGRDPDTAAAGENF
EQSPLKRTFKSKVLAHYPENVEWNPFDQDAVNMLCMPKGLSFRTQADSREPQFHSFLITR
EDGSRTYGFVHTFYEEVTSPQICSAMQTLYQMHQAENPSSATPSSSSSSSMDSLASSLDE
ADPPSSSSCRSAACGGYDASRDTLYVSKALCLITPMPFMHGCRRFLSQMHRAVTAASPPP
LPLESYVHNILYEVPLPPPGRSLKFHGVYEPIVCQRPGPGELPLADFPLGQTFTLLGIEN
LVQLFNCTLLEMQILLYSQDYQRLMTVAEGITTLLFPFQWQHVYVPILPASLLHFLDAPV
PYLMGLQSKEGTDRSKLELPQEANLCFVDIDNHCIELPEDFPQFPNKPEFIQELSEVLLR
YGISPVGGAPPTSVPTTTTTPGSVSTRHPGLKSQQALRELEDDGRNGNLGGEQLAVLELL
QGNTTLERLQALAKRTGVRVEALRGVGGEGEGQGGRTAVEEEELRNAKLNVQLREVFASR
FTTMFADYEAFVIQSAPDLESWLTNREQMHNFDKASFLSDQPEPYLPFLSHFIETQMFAT
FIDNKIMSQWEEKEPLLRVFDGRIDKARLYNVRAPSLRSSNYQRCTVLKESAQAIEQRMM
KIDHTAIHPHLLDMKIGQGKYEQGFFPKLQSDVLSVGPTNNNRWSNRTATAQRRKDRHRQ
QTEHLTLDNDLKEKYMQEARSLGKNLRQPKLSDLSPAVIAQTNWKFVEGLLKECRMKTKR
MLVEKMGREAVELGHGEANITGLEENTLIASLCDLLERIWSHGLQVKQGKSALWSHLLHY
QAREEKLEQQQAESPVSNGPERRKSESSIGMPSLRASVIQDMRHIQSMGEIKTDVGRARA
WIRLSLEKKLLSQHLKQLLSRQALTKKLYKRYAFLRCEEEKEQFLFHLLSLNTVDYFCFT
SVFTTIMIPYRAVIIPIKKLSNAMTTSNPWVCVSGELGDSGVRQITKNILEMTFDCQNLG
KLTTVQLGHDNSGLLAKWLVDCVMVRNEITGHTYKFPCGRWLGKGVDDGSLERVLIGELA
LPNADEDFGRGCRTPDMQHSPGQTRRVSITSMGGRGYKPTSAQIQEAIGEAVNSICKHFH
KPEKERGSLTILLCGEVGLVGALELFFHNGFKSARLFQKTVFVWDFVEKAVAYMESADQM
GDMQETAEPMGLTCVSLCHYVSAINSSPRNIGKDGKFQLLVCLGARDRLLIQWLPLLVEC
PVIQRMYEESALLRDRTTVNALIAVLQTLHDFPITLEASLVKGIDL
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggaccaacgcgacgtctggagcggcgccctgccgcttcgctcactactttgtg
atatgcggaatagacaccgaaactgggctggaaccggacgaattagccgctttgtaccaa
tggctagaggctgaccgccaaggcagggaccccgatacagcagccgcaggggagaacttt
gagcagagccccctgaagaggacgtttaagtctaaagtcctggcccactaccctgagaac
gttgagtggaaccctttcgaccaggatgctgtcaacatgctctgtatgcccaaaggcctg
tcgttcaggacacaggcagacagccgcgagccccagttccactcgttcctgatcacgcgg
gaggacggctctcgcacctacggcttcgtccacaccttctacgaggaggtgacgtcgcct
cagatctgctcggccatgcagaccctctaccagatgcaccaggctgagaacccttcctcc
gccaccccctcctcctcttcctcctccagcatggactctctggctagcagcctcgacgaa
gcagatcctccatcttcctcctcgtgccggtcggcggcgtgcggcggctacgacgcgtcg
cgggacaccctctacgtctccaaggcgttgtgtctgatcacgcccatgcccttcatgcac
ggctgccgccgtttcctgtcccagatgcaccgggccgtcacggccgcctcgcccccgccc
ctccccctggagagctacgtgcacaacatcctgtacgaggtgcccctgccccccccgggg
cgctcgctgaagttccacggggtgtacgagcccatcgtgtgtcagcgtcctgggcccggg
gagctgcctctggctgacttccctctgggccagaccttcactctgctggggatagagaac
ctggtgcagctgttcaactgtacgctgctggagatgcagattctgctctactcacaggac
taccagcggttgatgacagttgcggagggcatcaccaccctgctcttcccgttccagtgg
cagcatgtctacgtgcccatcctacccgcctcactgctgcacttcctggatgcccccgtg
ccctacctcatgggcctgcagtccaaggagggcaccgaccgctccaaactagagctgcca
caggaggctaacctgtgcttcgtggacattgacaaccactgcatcgagctgcctgaggac
ttcccccagttccctaacaaaccagagttcatccaggagctcagtgaagtcctcctccgc
tatggaatatccccagtggggggcgctcctccaacctctgtccccaccaccaccaccacc
cctgggtccgtctctacccgtcaccctggtctgaagagccaacaggccctgagggagcta
gaggacgatgggaggaatgggaacctaggcggggagcagttagctgtgttggagcttctc
caagggaacactactctggaaagactccaggctctggctaagagaacgggggtccgtgtg
gaagccctgaggggggtagggggtgagggagagggccagggggggaggacggcagtcgaa
gaggaggagctgaggaacgctaagctgaatgtacagctgagggaggtgttcgctagcagg
tttaccacaatgttcgcggactatgaggccttcgtcatccaaagcgctccggacctggag
tcctggctcaccaaccgagagcagatgcacaactttgataaggcatccttcctatctgac
cagccggagccctacctgcccttcctgtcccacttcatcgagacccagatgttcgccacc
ttcatcgacaacaagatcatgtcccaatgggaggagaaggagccgctgctccgcgtgttc
gacggacgcatcgataaagctcgtctatacaatgttagagccccaagtctgcgatcctcc
aactaccagaggtgcaccgtcctcaaggagtcagcccaggccatcgaacagcggatgatg
aagatcgaccacacagccatccacccccacctgttggatatgaagattggacagggcaaa
tatgaacagggcttcttccccaagctgcagtctgacgtgctctcagtcggacccaccaat
aacaacaggtggtccaatcgtactgctacggctcagcgtaggaaagaccgtcacagacaa
caaacagaacacctgactctagataacgacctcaaagagaagtacatgcaggaggctcgg
agcctggggaagaacctccgtcagcccaagctgtctgacctctcacctgccgtcatcgct
cagaccaactggaagtttgtagagggactactcaaggagtgtcgcatgaagactaagcgt
atgttggtggagaagatgggcagggaggcagttgagctgggtcatggggaggccaacatc
acaggtctggaggagaacactctcatcgcctccctctgtgacctgctggagaggatatgg
agccacggcctacaagtcaaacaggggaagtcagctctgtggtcccaccttctgcactac
caggccagagaggagaaactggagcagcagcaggcagagtcaccagtgtcaaatggtcca
gagagacgaaagtctgagtcgtcaatagggatgccatcactgcgagcgtccgtcatacag
gatatgaggcacatccagagtatgggggagataaagactgatgtgggcagagcgagggcc
tggatccgtctttctctggagaagaagctactctcccaacacctcaaacagctgctgtcc
cgccaagccttaaccaagaagttgtataagcgctacgccttcctgcgctgtgaggaggag
aaggagcagttcctgtttcacctgctctccctcaacactgtcgactacttttgtttcacc
agtgtcttcaccaccatcatgatcccgtaccgcgccgtcatcatccccatcaagaagctg
agcaacgccatgacgacctccaacccgtgggtgtgtgtgtcgggtgagctgggtgactcg
ggcgtcaggcagatcaccaagaacatcctggagatgaccttcgattgtcaaaacctgggt
aagctgactacagtccagttgggtcatgataactctgggctgctggctaaatggttggtg
gactgtgtcatggtccgcaacgagatcacaggacacacctacaagttcccgtgtgggcgg
tggcttggcaaaggcgtggacgatggcagtctggagcgcgttctgattggtgagctggcg
ttgcccaacgccgatgaggattttgggagagggtgtcgcacgcctgacatgcagcattcg
ccgggtcagaccagacgcgtcagcatcacctcgatgggaggacgcggatacaagcccacc
tcagctcaaatccaggaggccatcggcgaggcagtgaatagcatctgcaagcacttccac
aagcctgagaaagagaggggcagtctgaccatcctgctgtgtggtgaggtcggtctggtc
ggggctctggagctgttcttccacaacggcttcaagtccgcccgcctcttccagaagacc
gtctttgtctgggactttgtggagaaggcggtggcttacatggagtcagcagaccagatg
ggggacatgcaggagactgctgagcccatgggcctgacctgtgtctctctctgtcactat
gtcagtgccatcaactcctcgcccaggaacattggcaaggacggcaagttccagctgctt
gtctgcctgggggccagagatcgtctgctgattcagtggctccctctgttggtggagtgt
ccagtgatccagcggatgtacgaggagtctgctctgctgcgggaccggaccacagtcaac
gctctcatcgctgtcctgcagaccctccacgacttccccatcaccctggaggcctcgctt
gtcaagggcatcgacctttaa
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