Oncorhynchus tshawytscha (Chinook salmon): 112214302
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Entry
112214302 CDS
T05605
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112214302
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
112214302
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_3
EGF_CA
EGF
CUB
hEGF
TNFR_ELAPOR1_6th
Orbi_NS3
Motif
Other DBs
NCBI-GeneID:
112214302
NCBI-ProteinID:
XP_042153963
LinkDB
All DBs
Position
LG15:complement(7023670..7160443)
Genome browser
AA seq
1042 aa
AA seq
DB search
MGSACFSWDVCLFFVLINTCEVMGNVGLAEADECSEGTDDCHIDALCQNTPKSFNCICKP
GYKGDGKQCEDMDECENEYNGGCVHECINIPGNYRCTCYDGFMLAHDGHNCLDVDECMDN
NGGCQQVCVNTMGSYECMCKQGFFLSDNQHTCIHRSDDGMNCMNKDHGCAHICRETPKGG
VACECRPGFELAKNQRDCSLTCNYGNGGCQHMCDDTDVGPVCGCHQKYALHSDSKTCIDL
CSVAPRKCRPEFHDDDERDEAAIESSEFNTTSIADVDKRVKRRLLMETCAVNNGGCDRTC
KDTATGVRCSCPVGFTLQPDGKTCKDIDECQEAFNNGGCDHFCKNTVGSFECSCQKGHKL
LTDERTCQDIDECSFERTCDHTCVNYPGSFDCVCQEGYTLYGLTHCGDIDECSINNGSCE
HSCVNTQGGYECLCPPGQKLHWNKKDCTEAVKCLPDGKPAPRAQLSCDKRGGVEVCSLSC
PSNALFLADSENSYTLSCGVPVQPGKAPQKRNATTALLTCADTLPPPIKQKARFKVKDAK
CHLRPRNKEKHRETSKPSLQGGPLPCTDDCQVTFVNLKCDSSKKRRRGRKSPSKEVSHIT
AEFEMEMKEASGQCDCATSDSCNVECVRERMKQRLQSAMRTLRKSINKQQFYIQFSGTEY
EVAQKPALHVEQCSTGQVLRDGKCVSCGVGTYYSGDHDQCVVCPPGTYQDTMGQLSCEPC
PSTEGQGIAGAKNVSQCGGQCPAGQYSSDGFRPCNPCPLGSFQPEPGRVLCFSCGGGLMT
KYEGSVAFRDCEAKVHCAPGHHYNSSNHRCIRCPAGTYQSEFGQNYCITCPGNTTTDFDG
ATNVSHCKNQVCGGELGDFTGFIESPNYPGDYPSNVDCIWTINPPHKRRILIVVPEIFLP
IEDECGDVLVMRKSALPTSITTYETCQTYERPIAFTSRSRKLWIQFKSNEGNSGKGFQVP
YVTYDEDYQQLIEDIVRDGRLYASENHQEILKDKKLIKALFDVLAHPQNYFRYTAQESKD
MFPRSFIKLLRSKVTRFLRPYK
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgcttgtttttcctgggacgtttgtttgtttttcgtcctcattaatacttgt
gaggtgatggggaatgttggactcgcagaagccgatgaatgctctgaaggcacggatgac
tgtcacattgatgctctctgccagaatacccccaaatccttcaactgcatctgcaagccg
gggtacaagggagacggcaagcagtgtgaagacatggacgagtgtgagaatgagtacaac
ggaggctgtgtccacgagtgtatcaacatcccgggcaactacaggtgcacctgctacgac
ggattcatgttggcccacgacggacacaactgtctggacgtggatgagtgcatggacaac
aacggaggatgccagcaggtgtgtgtgaacaccatgggaagctacgagtgtatgtgcaag
caaggcttcttcctcagcgacaaccagcatacctgcatccaccgctccgacgatggaatg
aactgcatgaacaaggaccacggctgcgcccacatctgcagggagactcccaagggcggc
gtagcttgtgagtgccggcccgggttcgagttggcaaagaaccaaagagactgttcattg
acgtgtaactatgggaacggaggctgccagcacatgtgtgacgatacggatgtggggccg
gtttgtggctgtcaccagaagtacgccctgcactcagacagcaagacctgcatcgatctg
tgctctgttgcaccccgaaaatgtcgcccggagtttcatgatgacgatgagagagatgag
gctgcaattgagagctctgagttcaataccacgtcaatagctgatgtggacaagcgggtg
aaacggcggcttcttatggaaacctgtgcggtgaacaatggcggctgtgaccggacgtgc
aaggacacggctacaggggtccgctgcagctgccccgtgggattcaccctgcagccagac
ggcaagacctgcaaagacatagatgaatgccaagaggcgttcaataacggcggctgtgac
catttctgcaaaaacacggtgggctcctttgagtgcagctgccagaagggccacaagctc
ctcactgacgagcgcacctgtcaggatattgacgagtgttcctttgagaggacctgcgac
cacacctgcgtcaactaccctggcagcttcgactgtgtctgtcaggaaggatacactctg
tacggcctcacacactgcggagacatagatgagtgcagcattaacaacgggagctgtgag
cacagctgcgtgaacacacagggaggctatgagtgtctgtgtccgcccggtcagaaactc
cactggaacaagaaggactgcaccgaggcggtgaagtgtttgcccgacgggaagccagcg
ccgcgcgcccagctcagctgtgacaagagaggaggggtggaggtgtgctcgctctcctgt
ccgtccaacgcactcttcctcgcagactctgagaacagctacacactaagctgtggtgtg
ccggtgcaacctgggaaggcaccacagaagaggaacgccaccaccgccctgctcacctgt
gcggatacgttacccccgcccatcaagcagaaggctcgcttcaaggtcaaagatgccaag
tgtcacctgagacccagaaacaaggaaaaacacagagagacatccaagccgagtctgcaa
gggggtccgctcccatgtactgacgactgccaggtgacctttgtcaatctgaagtgtgac
tcgtccaagaagcggcggcgtggacgcaagtccccttccaaagaggtttcccacatcaca
gctgagtttgagatggagatgaaggaagcctcaggtcagtgtgactgtgcaacctcagac
tcgtgtaacgtggagtgtgtgagggagcgtatgaagcagaggttacagagtgccatgcgg
accctgaggaagtccatcaacaagcagcagttctatatccagttctctggtaccgagtac
gaggtggcccagaaacctgcactgcacgttgagcaatgcagcaccggacaggtcttacgg
gacggcaagtgtgtgagctgtggtgtggggacgtactatagtggagaccatgatcagtgt
gtcgtgtgtccccctggtacataccaggacacaatgggccagctgtcctgtgaaccctgc
cccagcaccgagggacagggcatcgctggggccaagaacgtctcccagtgcggaggccag
tgtccggctggtcagtattcgtcagatgggttccgtccctgtaacccctgtcccctgggc
tccttccagccggagcctggccgtgtactctgcttctcctgtggaggtggcctcatgacc
aagtatgagggctctgtcgccttcagggactgtgaggccaaagtccactgtgctcctgga
caccactacaactccagtaaccaccgctgtatccgctgcccagccggtacctaccagtca
gagtttggacagaactactgcatcacctgccctggcaacaccaccaccgactttgacgga
gccaccaacgtctctcactgcaagaaccaggtgtgtggcggtgagctgggggactttaca
ggctttattgagtctcctaactaccccggggactacccgtccaatgtagactgtatctgg
accatcaacccccctcacaagagacgcatcctcatcgtggtgcctgagatcttcctcccc
atcgaagacgagtgtggagacgtgctcgtcatgaggaagagtgccctgcccacctccatc
actacctatgagacgtgtcagacgtacgagcgaccaatcgccttcacctcccgctcacgc
aagctctggatccaattcaagtccaatgagggcaacagcggcaagggcttccaagtccct
tatgtcacctacgatgaggactaccagcagctgatagaggacattgtccgggacggcaga
ctctacgcatcagagaatcaccaagagatactgaaagataaaaaactgatcaaagccctg
tttgatgttctggctcacccccagaactacttcaggtacacggcacaggagtccaaagac
atgttcccccgctcgttcatcaagctgctgcgctccaaagtcacacggttcctacggccg
tacaaataa
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integrated database retrieval system
