Oncorhynchus tshawytscha (Chinook salmon): 112214303
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Entry
112214303 CDS
T05605
Name
(RefSeq) sorting and assembly machinery component 50 homolog B
KO
K07277
outer membrane protein insertion porin family
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112214303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112214303
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112214303
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
112214303
Transporters [BR:
otw02000
]
Other transporters
Pores ion channels [TC:
1
]
112214303
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
Motif
Other DBs
NCBI-GeneID:
112214303
NCBI-ProteinID:
XP_024228722
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All DBs
Position
LG15:7161201..7171836
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AA seq
470 aa
AA seq
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MGTVHARSMDPLPMHGRDMGVHPDDMIEVQEAEHETKQEVLENKDVVVQHVNIEGLGRTK
EDLLGYEISEVFDAKNLIDVMKKSHIARQKLLRLGIFKEVEVVIDTSDGADALPNGLDVT
FEVTEMKRLTGSYNTMVGNNEGSMVLGVKLPNVFGRAEKLTFQFSYGTKETSYGLSFFKP
QPGNFERNLTLNLYKVTGQFPWSSLKETDRGVSTELNFPLWRTNHTLKWEGVWRELGCLA
RSASFAVREESGHTLKSALSHTMSIDNRNSAIFPKKGALLRINQELAGYTGGDASFLKED
FELQVNRRLVWDSVLSASLWGGCLLPIGGRPSSIADRFYLGGPTSVRGFGMYSIGPQSEG
DYLGGEAYWAGGLHLYTPLPFRPGRGGFGDLFRTHFFLNAGNLCNLNYGEGPRAHLQRLA
ECVRWSYGAGIVLRLGNIARLELNYCIPMGVQSGDRICDGVQFGAGIRFL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggggactgtccacgccaggagtatggaccctctcccgatgcacgggcgtgacatgggc
gttcatcccgacgacatgattgaggtgcaggaggcagaacatgagactaaacaggaagtc
ctggaaaacaaagacgtcgttgtccaacatgtcaacattgagggcttgggccgaacgaaa
gaggatctgctgggctatgaaatctcagaggtcttcgatgctaaaaaccttattgatgtc
atgaagaagtctcatattgccagacagaaattgctgcgtctgggcattttcaaggaggtg
gaggtcgtcattgatacatcagatggtgcggatgcgttgcccaatggtctggatgtgacg
ttcgaggtgacagagatgaagaggctgacaggcagctacaacaccatggtcggcaacaac
gagggcagcatggtgttgggtgtgaagcttcctaacgtgtttggccgtgctgaaaagtta
accttccagttctcctacgggaccaaggagacgtcctacggcctgtccttcttcaagccc
cagccaggcaacttcgaacgcaacctcactctaaacctgtacaaagtcacaggccagttt
ccatggagctccctcaaagagacagacagaggagtctccactgagctcaattttcctttg
tggaggaccaaccacactctgaagtgggagggtgtgtggcgggagctgggatgtctggca
cgcagtgcctccttcgccgtgcgagaagagagcgggcacaccctcaagtctgccctctcg
cacaccatgtccattgacaacaggaactctgccatcttccccaagaaaggtgccttactg
aggatcaaccaggagctggctggctatacaggcggagatgcaagcttcctgaaggaggac
tttgagctgcaggtcaacagacggctggtctgggactcggtcctctccgcctctctctgg
ggtgggtgtctcctccccattggaggtagaccatcctccatcgctgacaggttctatctg
ggcggtcccaccagtgtgcgaggatttggaatgtacagcatcggcccacagagcgagggt
gactacctggggggagaggcgtactgggcaggcgggctccacctgtacactcctctgccc
ttccgtccgggccggggtggcttcggagacctcttcaggacacacttcttcctcaacgct
gggaacctgtgcaacctcaactacggagagggtccaagagcacacctacagaggctggcg
gagtgtgtccgctggtcgtatggagcaggcatcgtgttgcgtctcgggaacatcgccagg
ctggagctcaactactgcattcccatgggggttcagagtggagacaggatatgcgacggc
gtccagtttggagcaggaatccgtttcctgtga
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