Oncorhynchus tshawytscha (Chinook salmon): 112214322
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Entry
112214322 CDS
T05605
Name
(RefSeq) protein bicaudal D homolog 1-like isoform X1
KO
K18739
protein bicaudal D
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112214322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112214322
04131 Membrane trafficking [BR:
otw04131
]
112214322
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112214322
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112214322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BicD
ApoO
DUF1759
Motif
Other DBs
NCBI-GeneID:
112214322
NCBI-ProteinID:
XP_042153976
LinkDB
All DBs
Position
LG15:complement(7721051..7767170)
Genome browser
AA seq
1124 aa
AA seq
DB search
MAAGGGCGETVEHCRAEVERLTRELAEANREKIRAAECGLVVLEENQTLKQQYSDLEAEQ
EALRQELEQLQEAFGQTFSTQRKVAADGETNEETLLQESATKEAYYTSRLLVIQSELKQS
RAVTVNTQADNEHLSTLLQELRESNEMLELQRSRMREEIREYKFREARLLQDYTELEEEN
ITLQKLVSTLKQNQVEYEGLKHEIKVLEEETELLNSQLEDALRLKDISEAQLEEALDSLK
SEREQKKHLRKELVHHLSLCDVQYTGSAHLTFTSAPPSGTATPVSALSPNSEEPGRCNGH
LHGGSGTGTGTGSLPRANGECRGAGRKGEGMVSDLFSEMNLTEIQKLKQQLLQAEREKTG
LLISLQECQTQLQHTQGALNEQHERALRLSERVTALRHLHREAHLAQEAQHDQEAHLNRE
ALMEQGEEEEEEKEKGLIHSRGQAFCHQTPGLEILQCKYRVAVTEVVELKAELKSLRERY
NQCVEGGVDERTRGEAQHRSLEQQVGRLERSCREGREKVGGLETELKTAKNMASESQGAL
NAAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRHGRGLRGISASLKGDDTRVLLT
PRLARRLAAVAAATSSSTAESRSPSESPSKERLSGERGRDGGRDRDSPVPRTPPTGSPSI
SASSSSSSSSSSPAVEPAGDLRREPMNIYNLNAIIREQVRHLQRAVDRSLQLSRQRAAAR
ELAPLFDKDKEACMEEILKLKSLLSTKREQIATLRLVLKANKQTAENALANLKSKYENEK
HMVTDTMMKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLN
SLLRMAIQQKLALTQRLEDLAFDQEQSHRTRGSKVARMKSSTPKVSPAPPSSPTTGAGAP
LNLTSATTDALALSSPTSHHRHSVSPSSTAPSGPKVPDSPPSLEALSSSWTPPSTPHMLD
HSQWALGVRTLEVDSHSFSLDSHSFSLERSSTGLSRHYSSDSRPSPSRGAQPGSAPSSPY
CSPILRSRRLTWSSPRTRPLSNLTRTSALYTPSSYTPPSSYIPSSSYTPSSLYTPSSSYT
PSSAHYSPSSYTPPSSYTPHTSYSLTSSYSPLYPRYYGSHRPPH
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggaggaggatgcggggagacggtggaacattgccgggcagaggtggagcgt
ttgacccgtgagctggcggaggcgaaccgggagaagatccgggctgcggagtgcggtctg
gtggttctggaggagaaccagaccctgaagcagcaatattcggatctagaggccgagcaa
gaggcgctcagacaggagctggagcagctacaagaggcgtttggccagaccttctccacc
cagcgcaaggtggctgcggacggggagaccaacgaggagaccctcttgcaggagtcagcc
acgaaggaggcgtactacacgagtcgcctgctggtgatccagtcagagctcaaacagagc
cgggccgtcacagtcaacacacaggccgacaacgaacacctcagtaccctgctgcaggag
ctcagagagagtaatgagatgttggagctgcagcggagccggatgagagaggagatcagg
gagtataagttcagagaggctcgactcctacaggactacactgagctggaggaggagaac
atcaccctgcagaaactagtgtccactctcaaacagaatcaggtggagtacgaggggtta
aagcatgagatcaaggttctggaggaggagaccgagctgctgaacagtcagttagaagac
gccttacgtctcaaagacatctccgaggcccagctagaggaggccctggactccctgaag
agcgagcgggagcagaagaagcacctccgcaaggagctggtccaccacctcagcctgtgt
gacgtccaatacacgggcagcgcccacctcactttcacctcagcgccacctagtggcacg
gctacgcctgtctccgccctgtcgcccaactcagaggagccaggcaggtgtaacgggcat
ctacatggagggtcaggaactgggacggggacagggtcgctgcccagggccaatggagag
tgtcggggagcggggaggaaaggagaggggatggtgtcggatctgttcagtgagatgaac
ctgacagagatacagaagctcaagcagcagctgctacaggcagagcgggagaaaacaggg
ctgttgatcagcctgcaagagtgtcagacgcagctgcagcatacacagggtgccctgaac
gagcagcacgagagggccctccgcctcagcgagagagtcaccgccctcaggcatctgcac
cgggaggcccatctcgcccaggaggcccagcacgaccaggaggcccacctcaaccgagag
gccctgatggagcagggagaagaggaagaggaggagaaagagaagggattaatacacagc
aggggccaggcattctgccaccagaccccgggtctggaaatactccagtgtaaatacagg
gtggctgtaaccgaggtggtcgagctaaaggctgagctgaagtcgctgagagagaggtac
aaccagtgtgtggagggcggggtggacgagaggacacgcggagaggcccagcacagatct
ctggagcagcaggtggggaggctggagaggagctgccgggaaggtagggagaaggtgggg
ggcctggagacggagctgaaaacagccaagaacatggccagcgagagccagggggcgctc
aacgcagcacaggacgaactggtcaccttcagcgaggagctggctcaactttaccaccat
gtctgcctctgtaacaatgagacgcccaaccgggtgatgctagactactacagacacggc
agaggactaaggggcatcagtgcctcgctcaagggtgacgacacccgcgttctactcacg
ccccgcctcgcccggcggctcgcagccgttgccgcagcaacctcgtcgtccacggcggag
tctcgtagcccctcggaatccccatccaaagagcggttgtcaggagagagaggccgggac
gggggaagggacagagacagtcctgtaccccgcacccctcctacggggtcccccagcatc
agtgcctcttcctcatcttcatcatcatcatcgtcgcctgcggtagagccagctggagac
ctgcgtagggaacccatgaacatctataacctcaacgccatcatcagagagcaggtgagg
cacctccagagggcagtggaccggtcactccagctgtccagacagagggctgcagccagg
gaactggccccactgtttgacaaggacaaagaggcctgtatggaggagatactgaagctc
aagtccctgctcagcaccaagagagaacagatagctaccctcagactggtgctcaaagcg
aacaaacagactgcagagaatgccctggccaacttgaagagtaagtatgagaatgagaag
cacatggtgacagacaccatgatgaagctgaggaacgaactgaaggccctgaaggaggac
gctgccaccttctcatcgctcagagccatgttcgccaccaggtgtgacgagtatgtgact
cagctggatgagatgcagaggcagctggctgcggcggaggacgagaagaagacgctcaac
tctctcctgcgaatggccatccagcagaaactagccctgacccagcgtctggaggaccta
gccttcgaccaggagcagtcgcaccgcacccgcggcagcaaggtggcccgcatgaagagc
agcacccccaaagtaagtcctgctcctccctccagccccaccaccggcgctggcgccccc
ttaaacttgacctctgctactacagacgccctagctctgagctcccctacgtcacatcat
agacactccgtcagcccctcctccacggccccctcaggccccaaagtaccagacagcccc
ccctccctggaagcgctctcctcctcctggacccccccatccactccccacatgctggat
cactcccagtgggcactgggtgtccggacgttagaggtcgactcccacagtttcagtctc
gactcccacagttttagtttagaacgtagcagtactgggctctccaggcattactcctca
gactcacggccgtctcctagcaggggtgctcagcctggctcggccccctcctccccctac
tgttctcccatactgaggtctcgccggttgacatggagctcccctcgaactcgccccctt
agcaacctgacgcgtacctcagccctttataccccctcttcttacacccctcctagttcc
tatatcccttctagttcttacaccccttcctccctttataccccctccagttcctatacc
ccttcatctgctcattactctccttcatcatataccccaccctcgtcgtacaccccccac
acttcatatagtctcaccagcagctacagtccactctaccctaggtactacggttcccat
cggccccctcactga
DBGET
integrated database retrieval system
