Oncorhynchus tshawytscha (Chinook salmon): 112214398
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Entry
112214398 CDS
T05605
Name
(RefSeq) cadherin-related family member 5-like isoform X1
KO
K16505
cadherin-related family member 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112214398
Cell adhesion molecules [BR:
otw04515
]
Cadherins
Cadherin related
112214398
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
112214398
NCBI-ProteinID:
XP_024228857
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Position
LG15:11125852..11151984
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AA seq
758 aa
AA seq
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MLTPWGLFLCQLVINTSYHVIKASLCLGGSDIFATVSENSPVGEFIANLSIIGDPTGVNS
IRLCLTGENANWFYLEGRTIRLNSSVLRVLDRERQGSVLMAALTCYEDDIIQSEYRVIVE
ILNENDNKPKFFEKTIQPRYISELTAVNSVVFTVKAIDADGDTITYIIDRALPDASYFRI
DLPNSGKVILDKPLDYETKTQLQLVIYAVETNTKEWYNTSASLTVHVKDGDDQYPQFLPC
TPISQDNKHTVVCTNPLYTVNITEKDQDMLLNFSPGPIHAEDGDRSLDTPLLYSILSGAD
KNRFQIDNQTAEITLTRRVENRHLTPTFRLRIMASQLNDPKKYSVATALVRVLAENRFPP
LFNRTTYKGFIVENSSPATLVSTYGNEVLLIQVIDQDFVDGVNPKMHYSLPPTSATTALY
HITQEGVIIAKTDRLRPFERHFLEVVAMDEESGEVAKASVDIELLQRGQPVPRTPFGEER
LFRDMDVRMAGGIMGGMLLLLVAILFLLIRWAKRRRRRDPARRGAVILGKHPNVSLRGFQ
MVNSGRPMIPLIEEVCYQNKGFSIDYDASGGSGSLYGRHGVYTRKQSLIPPQPRSHSSHP
DCGSRTVTGDMLPILVMPEPLVKDLTPTLISNGRKAESTISMGAVTKDKKEKERNKQRDM
EKEEEGEWEKEWERAVDTKEKKYSEGERTDKSRDVVGASSGASSENADVSEASEDQTNTE
KPQSHRMKTHQIKDPKDGHKSTSEEESETENQYKNMHS
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccccatgggggctgttcctctgccagctggtaataaacacgtcctaccatgtc
atcaaagccagcctctgcctgggtgggtcggacatctttgcaacggtgagcgagaacagc
cctgtaggagagttcatagcgaacctcagcatcatcggggaccctacaggagtcaatagc
atccgcttgtgcctcaccggagagaacgccaattggttctaccttgaagggagaaccatc
aggctaaactcatccgttttaagagtcctggatcgagagcgccagggatctgtattgatg
gcagcattaacatgttatgaagatgacataatacagagtgaatacagggtcatagttgag
atcctgaatgaaaacgacaacaaaccaaagttctttgagaagactatacaaccacgttac
ataagtgagctcactgcagtcaactctgtagtcttcaccgtcaaggccatcgatgctgat
ggagacaccatcacctacatcatcgacagagccttgcctgatgccagctatttcaggata
gacctacccaacagtggtaaagtgatcctggacaagccattggactatgagaccaaaacc
cagctgcagctagtcatctacgctgtggaaaccaacaccaaggagtggtacaacacttcc
gcctctctgactgtgcacgtgaaggacggggacgaccagtaccctcagttcctaccgtgc
acacccatctcccaggacaacaaacacacggttgtctgcaccaatcccctctacacagtc
aacatcacagaaaaggaccaggacatgttactgaatttctctcctggtccaattcatgcc
gaagatggagacagaagccttgatacgcctttgctctactccattctctcaggtgctgac
aaaaacaggtttcagattgacaaccaaacagcagagatcacattgactagacgggtggaa
aacagacacctgacacctacattccgactacgcatcatggcatctcagctgaatgaccca
aagaagtacagtgtggcgacagcgctggtccgggtgctagcagagaaccggttccctccc
ctcttcaacagaaccacgtacaagggcttcatcgtcgagaactccagtcctgccacacta
gtctccacctatgggaacgaggtgcttctcatccaagtcatagaccaggacttcgtagat
ggggtgaatccaaaaatgcattactctctcccgcccacatcagccacaactgcactgtac
cacatcacccaggaaggggttatcatcgctaagaccgaccgcctacgacccttcgagagg
cacttcctcgaggtggtcgctatggatgaggaatcaggtgaggttgctaaagcctcagtc
gacatagagctgctacaaagaggccagccagttccacggacacctttcggagaagagcgg
ttgttcagagacatggatgtgaggatggctggcgggatcatgggtgggatgctgctactg
ttagtggccatcctgttcctgctgatccgatgggccaagaggagacggagacgggacccg
gccagacgaggggctgtcatcctggggaagcaccccaatgtgagcttaagggggttccag
atggtgaactcgggccggcccatgatccccctgattgaggaggtctgctaccagaacaaa
gggttcagcatagactacgatgcctcgggaggttccggaagcctctatgggagacatggg
gtctacaccaggaaacaatcactgatcccaccacaaccacgctcccacagcagccatcca
gactgtggctccaggaccgtaacaggcgacatgttgcctatactggtgatgccagagccc
ttggttaaagacctcactcccaccctcatctccaatggcaggaaagctgagagcaccatc
agcatgggggctgtgacaaaagacaagaaggagaaggagaggaataagcagagggatatg
gagaaggaggaggagggggaatgggagaaggagtgggaacgcgctgttgacacaaaagag
aagaaatattcagagggggaaaggacagataagtcaagagatgttgtgggtgcttctagt
ggtgcttctagtgagaacgcagatgtaagcgaggcctctgaggaccaaacaaacacagaa
aagcctcagagtcacaggatgaaaacacaccaaatcaaagatcccaaagacggacacaaa
agcacttctgaagaggagtctgagacagaaaaccaatataagaatatgcactcatga
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