Oncorhynchus tshawytscha (Chinook salmon): 112214424
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Entry
112214424 CDS
T05605
Name
(RefSeq) TBC1 domain family member 22B
KO
K20360
TBC1 domain family member 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112214424
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
112214424
Retrieval pathways
112214424
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
CDC45
Motif
Other DBs
NCBI-GeneID:
112214424
NCBI-ProteinID:
XP_024228912
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All DBs
Position
LG15:12159175..12360377
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AA seq
540 aa
AA seq
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MSTDGNKKQFWKRNTAKVPGSIQHVYGAQHPPFDPLLHANLIKAGNKPQTTPGGKPKKAT
TFQEFESITSDAWDVGDDDDELLAMAAQNLNIEVVMETANKVIENHSKQQEKQRQDDAGA
SELEEREEEDANEEEVEEEEEQGEEGEESTPEVSFASESSPLGDGRLVKSLSEAPIGSPK
DVSLHRQQSLPHRPTIPMVARIADQNTSGTPAMTEREASRLDKFRQVLAGPNTDLEELRK
LSWSGIPRQVRPITWKLLSGYLPANTERRESTLQRKRQEYFGFIEQYYDSRNDEHHQDTY
RQIHIDIPRTNPLIPLFQQASVQEIFERILFIWAIRHPASGYVQGINDLVTPFFVVYVFE
YIKEEVENFDVSSLQEETLRNIEADSFWCMSKLLDGIQDNYTFAQPGIQRKVKALEELVS
RIDETVHVHMQQYEVEYLQFAFRWMNNLLMRELPLRCTIRLWDTYQAEPEGFSHFHLYVC
AAFLVRWRKEILDERDFQGLMILLQNLPTMHWGNEEVSVLLAEAYRLKFAFADAPNHYKR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgacggaaacaagaaacaattctggaaaagaaacacagctaaggtccctggc
agcatacaacatgtgtatggggctcaacatcctccttttgaccctcttctgcatgctaat
ctaattaaagcgggcaacaagccccagacaacaccgggagggaagccaaagaaagccacc
accttccaggagtttgagagcatcaccagcgatgcctgggacgtgggggacgacgatgac
gagctactcgccatggctgcacagaacctcaacatcgaggtcgtcatggaaaccgccaac
aaggttatcgagaaccacagcaagcagcaggagaagcagagacaggacgatgccggcgcg
tcagagctggaggagagagaggaagaggacgcaaatgaagaagaggtggaagaagaggaa
gagcagggggaggaaggggaggaatcaacccctgaggtgtcgtttgcctctgagtccagc
ccgcttggcgatggcagacttgtgaagtcactgagtgaggcccccatcggatcacctaag
gatgtgtcgctccacagacagcagtccctgccccaccggcccaccatccccatggtggct
cgtatagctgaccagaacacctccgggaccccagccatgacagagagagaggcctctcgc
ctggacaagttcagacaggtcctggctggacccaacactgaccttgaggaattacgaaag
ttgagctggtctggaattcctcgtcaggttcgtccaatcacgtggaagctcctatcgggt
taccttcctgccaacacagagaggagagagagcacactacagaggaagagacaggaatac
tttggtttcatagaacagtactacgactcgcgcaatgacgagcaccaccaagacacatac
agacagattcacattgacatcccgagaaccaatccccttattcctctctttcaacaagct
tctgtccaagagatctttgagcgtatcctgttcatctgggcgatccgccacccggccagc
ggctacgtgcagggcatcaacgacctcgtcacgcctttcttcgtcgtctatgtctttgag
tacatcaaggaggaggtggagaactttgatgtgtccagcttgcaggaggagactttgcgg
aacatcgaggctgacagtttctggtgcatgagcaagctgttggacggcattcaggacaac
tacacatttgcccagcctgggatccaaagaaaagtcaaggctctggaggagttggtcagc
aggatcgatgaaacggtgcacgtccacatgcagcagtatgaagtggagtatctccagttt
gccttccgttggatgaacaacctgctgatgagagagctgccgttacgctgcaccatacgc
ctctgggacacctaccaggctgaaccagagggattctctcacttccatctctatgtgtgt
gctgctttcctggtgcgatggaggaaagagattctggatgagagagatttccagggtctg
atgatcctgctgcagaacctacccaccatgcactggggcaacgaggaggtcagcgtgctc
ctggccgaggcctacaggctgaagtttgccttcgctgacgcccccaaccactacaagaga
tga
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