KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112214450
Entry
112214450         CDS       T05605                                 
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:otw01009]
    112214450
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:otw03036]
    112214450
Enzymes [BR:otw01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     112214450
Protein phosphatases and associated proteins [BR:otw01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     112214450
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    112214450
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHD_5 GlgE_dom_N_S
Other DBs
NCBI-GeneID: 112214450
NCBI-ProteinID: XP_024228963
LinkDB
Position
LG15:complement(13483172..13574816)
AA seq 1778 aa
MSLTDVNTIDFKHKYYWLFKENIICDFIMSDFAEFVPPPECPVFEPSWEDFSDPLGFINK
IRPIAERTGICKIRPPEDWTPPFACDVRNFRFTPRVQRLNELEALTRVKLNFLDQIAKFW
ELQGSRLRFPHVERKILDLYQLSKIVSSEGGFDTVCKEKRWSKVGSRMGFPPGKGMGSLL
RSHFERILYPYELFQSGATLTGIHHLYEEGDDEEVQDEGMGEEEEEEEEDEEDRERDSLS
DGTQNKDCLLPERRSRRLKYEVGDERENKEPKTMQIFGSGPKMVGLEIVPAEDDGFNKKQ
RHLKAQAFAIKMRPRKETLEVNFIDLYMCLMCGRGDEEDRLLLCDGCDDSYHTFCLIPPL
QDVPKGDWRCPKCVAEECSKPREAFGFEQAVREYTLQSFGEMADHFKSDYFNMPVHMVPT
ELVEKEFWRLVSSIEEDVIVEYGADISSKEVGSGFPVRDGKRRLLGDEEEYANSGWNLNN
MPVLEQSVLTHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINFLHWGEPKTWYGVP
AHAAEQLESVMKKLAPELFDSQPDLLHQLVTIMNPNVLMEHGVPVFRTNQCAGEFVVTFP
RAYHSGFNQGYNFAEAVNFCTADWLPMGRQCVAHYRRLHRYCVFSHEELLCKMAADPESL
DVELAAAVFREMGEMMEEETRLRQALQEMGVLSLEQEVFELVPDDERQCQKCKTTCFLSA
LTCPCSPEHLVCLHHAKELCDCPLGIKCLRYRYDLEEFPSMLYGVKSRAQSYNTWAKRVT
DALAADHKNKKDLIELKVLLEDAEDRKYPENSLFRRLREMVKEAETCSSVAQVLLSRKQR
HSTRQHPECSRTRNKLTVEELKVFVEQLFKLPCVIGQARQVKELLENVEDFHERAQVALA
DELPDSSKLQALLDLGGGLDVELPELPRLKQELQQARWLDEVRVTLAEPHRVTLELMKRL
IDSGVGLAPHHAVEKAMAELQEILTVSERWEDKACACLQARPRHSMLTLESIMIEARNIP
AYLPNVLALREALHKAKEWSAKVDAIQVVSRRTCGSNYAYLEQLESLLARGRSIPVRLDP
LPQVESQVASARAWRERTARTFLKKNSTYTLLQVLSPRVDIGIYGNSKSKRRRVKELLEK
ERGLDLEGLSGLDESYEDACDPAIVVAAFKSKEQKEVEAIHSLRAANLAKMAMSDRIEEV
KFCLCRKTASGFMLQCELCKDWFHGACVPLPKAGSQKRLMGSAGCQGNSKEAKFLCPLCQ
RSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMGWQDRARQALATNELSSALAKL
SVLSQRMVEQAAREKTEKIINAELQKAAANPDLQGHIQTAGFSRAASPRQSVDYDDEETD
SDEDVRETYGYDMKDPGEVKPYLFCDEEIPVKSEEVVSHIWPTTPSFCAEHAYSSASKSC
PQNQSTPRKQPRKTPLVPRSLEPPVLELSPPAKAQLEELMMVGDLLEVSLDETQHIWRIL
EATHPPSEERFLQVMEHEDSQFEKPMKIKMKDSEKKRKRKLEKAEHQLLMAAVSGVGDMM
RSPKSSKDPKLSLLDPLGKPKKKKLKLNPDKNRELKQLAKRLAKEDKERKRKDKAVVKSE
AVREGMEKRKEKKILDIPSKYDWSGAEDSNDENAVCASKNCVRPCKDKVDWVQCDGGCDE
WFHQVCVGVTCEMAENEDYICIDCTRKSSILSRGVVGSLGRSMGIGGGGVTAVVKLERVC
EEPVVLEAPVYSGLSQIMMPPSTSLPQQQQQPDTRESS
NT seq 5337 nt   +upstreamnt  +downstreamnt
atgtcactcacagatgtcaacacaatagattttaaacacaagtactattggctttttaaa
gaaaatataatttgtgatttcatcatgtctgattttgctgaattcgtaccccctcccgag
tgcccagtttttgagccgagttgggaagatttttcggatccactaggatttataaacaag
attcgacctattgcagagagaactggcatctgcaaaattcgaccgccagaggactggaca
cctccttttgcctgcgacgtgcgcaacttccgctttactcccagagtccagagactcaat
gaattggaggccctcactcgggtcaagctcaacttcctggatcagattgccaagttctgg
gaactgcaggggtccaggctgcgcttccctcatgtggagaggaagatcctcgatctgtac
cagctcagcaagattgtctcctccgagggaggctttgataccgtgtgtaaggagaagaga
tggtccaaggtgggcagcaggatgggtttccccccagggaagggtatgggctctctgctg
cggtcccacttcgagaggatcctctacccctatgagctcttccagtctggagccacgctc
actggtatccaccatctgtacgaggagggagatgacgaagaggtgcaggacgagggcatg
ggggaagaggaagaggaagaggaggaggatgaagaggaccgagagagggacagcctgagt
gacgggactcagaacaaggactgcctgctccctgagcgacgctcccgccgcctgaagtac
gaggtcggtgatgagcgggaaaacaaagagcccaagaccatgcagatctttggcagtggt
cccaagatggttggtttagagattgtaccggctgaagacgatgggttcaataagaagcag
cgtcacctgaaggcccaggccttcgccattaagatgcgaccacgcaaagaaaccctggag
gtcaactttattgacctgtacatgtgcctgatgtgtgggcggggtgacgaggaggaccgc
ctcctgctgtgtgacggctgtgatgacagctaccacaccttctgtctgattccgccccta
caggatgtccctaaaggggactggcgatgccccaaatgtgttgctgaggagtgcagtaag
ccgcgggaggcgtttggctttgagcaagccgtgagggagtacaccctccagagctttgga
gagatggctgaccacttcaagtcagactacttcaacatgcctgtgcacatggtgcctaca
gagctagtggagaaggagttctggcgtctggtgagctccatcgaggaggatgtcattgtg
gagtacggagctgacatcagctctaaggaggtgggcagcggcttccccgttagggatggc
aagagacggctactgggagacgaagaggagtatgccaattcaggctggaacctgaataac
atgccagtcctggagcagtcggtccttacccacataaatgtggatatctctggcatgaag
gtgccctggctctatgtgggcatgtgcttctcctccttctgctggcacatcgaggaccac
tggagctactccatcaacttcctgcactggggggagcctaagacttggtatggtgtcccg
gcccacgcggcagagcagctggagtcagtgatgaagaagctggccccagagctgtttgac
tctcagcctgacctgttgcaccaacttgtcaccatcatgaatcccaacgtcctcatggag
cacggagtgcccgttttccgcaccaaccagtgtgcgggggagtttgtggtgacctttccc
agagcctaccacagtggcttcaaccagggatacaactttgctgaagctgtcaacttctgt
accgcagactggctcccgatgggtcgtcagtgtgtggcccactaccggcggctccaccgc
tactgtgtcttctcccacgaagagctgctgtgcaagatggctgccgaccccgagagcctg
gatgtggagctggctgctgcagtcttcagagagatgggagagatgatggaggaagagaca
cggctcagacaggccttgcaggagatgggtgtgctgtccttggagcaggaggtgtttgag
ctggtccctgatgacgaacggcagtgtcagaagtgtaagaccacctgtttcctgtcagct
ctgacgtgtccctgcagcccagagcatctcgtctgtctgcaccatgccaaggagctatgt
gactgtcccctgggaatcaagtgtctacgctaccggtatgatctggaggagtttccctcc
atgttgtatggggtgaagtccagagcccagtcctataacacctgggccaagcgggtcact
gatgccttggctgctgaccacaagaacaagaaagacctgatagagttgaaggtgcttctg
gaggatgctgaggacaggaagtatccagagaacagtctgttccgtcggctcagagagatg
gtgaaggaggccgaaacctgctcttctgtggcccaggtactgctcagccgcaagcagaga
cacagtaccaggcagcatccagagtgcagcaggactcgtaacaagctgacagtggaggag
ctgaaagtctttgtagagcagctgttcaaactgccctgtgtcattggacaggctcgacag
gtcaaagagttactagagaacgtggaggacttccatgagagagcccaggtagccctggct
gacgagctgcctgactcctccaagctgcaggccctgctagacctgggtggaggtctggat
gtggaactacctgagctgcccaggctcaaacaggagctgcagcaggcccgctggctggat
gaggtgcgtgtgacgctggcagagccccaccgggtgaccctggagctgatgaagcggctg
atagactctggggtggggctggcaccacaccatgctgtggagaaggccatggctgagttg
caggagatactcactgtgtcagagagatgggaggacaaggcctgcgcatgcctacaggcc
aggcctcggcacagcatgctaaccctggagagcatcatgatagaggccaggaacatacca
gcctacctgcccaacgtcctggccctccgagaggctctgcacaaggccaaggagtggagt
gccaaggtggatgccattcaggtagtgtcgcgtcgcacgtgtggcagtaactatgcatac
ctggagcagctggagagcctgctggcgaggggtcgctccatccccgtccggctggaccct
ctgcctcaggtcgaatcccaggtggcctcagcccgtgcctggagggagaggactgcacgc
accttcctcaagaagaactcaacctacaccctgctacaggtccttagtccgcgtgtggat
attggtatctacggcaacagcaagagcaaacgcagacgagtcaaggagctccttgagaag
gagaggggtctggacctggagggtctcagcggccttgacgagagttatgaagatgcctgt
gacccggccatcgtcgtagcggcattcaaatccaaggagcagaaagaagttgaggccatc
cactccctccgagctgccaacctggctaagatggccatgtctgaccgcatcgaggaggtc
aagttctgtctgtgtcgtaaaactgccagcgggtttatgttgcagtgtgaactatgcaag
gactggttccacggagcctgcgtgccattaccgaaagcgggctcgcagaagaggctcatg
ggctcggccgggtgccaaggcaacagcaaggaggccaaattcctgtgccctttatgccag
cggtcacgtcgcccgcgtctggagaccatcctgtctctcctggtgtccctccagaagctg
ccggtgcgtctgcctgaaggggaggccctacagtgcctgacggagagggccatgggctgg
caggaccgcgccaggcaggccctggctacaaacgagctgtcctcggccctggccaagctg
tcggtgctcagtcagaggatggtagaacaggctgcccgggagaagaccgagaagatcatc
aacgccgagctgcagaaggctgccgcaaaccctgacctgcagggtcacatccagacggca
gggttcagcagggcagcgtcgccacgccagtctgtcgactacgatgacgaggagacggac
tctgacgaggacgtcagggaaacatatggctacgacatgaaggacccaggtgaagtgaag
ccgtacctgttttgtgatgaggagatccctgtcaagtcagaggaagtagtcagtcacatc
tggcccaccacaccctctttctgtgctgaacatgcctactcctctgcatccaagtcctgc
cctcagaaccagagtacccccaggaagcagcccaggaagacgcccctggtgcctcgctcc
ctggagccccctgtgctggagctgtcccccccagccaaggcccagttggaggagctgatg
atggtgggggacctgctagaggtgtccctggacgagacccagcacatctggaggatcctg
gaggccacacaccctccctctgaggagaggttcctacaggtcatggagcatgaagattct
cagtttgagaagccgatgaagatcaagatgaaggactctgagaagaagaggaagaggaag
ctggagaaggcagagcaccagcttctcatggcagctgtctccggggtcggagacatgatg
cggtcccccaagtcctcaaaggatccgaaactgagcctcttagacccgctggggaaaccc
aagaagaagaagctgaagctgaacccggataagaaccgtgaactgaaacagctggccaag
cgcctggctaaagaggataaggagaggaagaggaaggataaagctgtggtcaagtctgag
gctgtcagggaggggatggagaagaggaaagagaagaagatcctggatataccgtcgaaa
tatgactggtctggagctgaggactccaatgatgagaacgctgtctgtgcgtccaagaac
tgtgtgagaccctgcaaggacaaggtggactgggttcagtgcgacggcggctgtgacgag
tggttccaccaggtgtgtgtgggtgtgacctgcgagatggccgagaacgaggactacatc
tgtatcgactgcacccgcaagtcgtctatcttgagtcggggcgtagttggaagtttgggc
agaagcatgggcataggaggaggaggggtgacagcagtggtgaagttggagcgtgtttgt
gaggagccagtggtgctggaagcaccagtctacagtgggctgagccagatcatgatgccc
ccctctacctccctcccccagcaacagcagcagccggatactcgggagagcagctag

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