Oncorhynchus tshawytscha (Chinook salmon): 112214460
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Entry
112214460 CDS
T05605
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like
KO
K09663
beta-1,6-N-acetylglucosaminyltransferase 4 [EC:2.4.1.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00512
Mucin type O-glycan biosynthesis
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
112214460
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112214460
Glycosyltransferases [BR:
otw01003
]
Glycan extension
O-Glycan
112214460
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Motif
Pfam:
Branch
Motif
Other DBs
NCBI-GeneID:
112214460
NCBI-ProteinID:
XP_024228979
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Position
LG20:7729942..7770421
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AA seq
450 aa
AA seq
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MKIRFAFPSRLRKKNFISSLSLLLVICAFLLLFLKFTVKYSITIETYGSTAGYNDVELLH
RYNIDCNAIYEMEPAELGKSLVIRKQVVVEEQDKSLVNLISNCPRYLLSRGYGDVQVSEE
EQAFPLAYSLVVHKSASMVEKILRAVYTPNNIYCIHYDLKSSELFRESMEGLARCLPNVF
IASKLEAVTYASISRLNADLNCLSDLIGSKVKWRYVINLCGQDFPLRSNIELVADLKKLR
GGNMMETSRPSEYKKQRFSFHHELQNVSFEYHRLPVKTNKAKGPPPHGIQMFIGSAYFVL
SLEFVTYMNKSALAKDFLMWSNDTYSPDEHFWATLTRVPGVPGEVPRAQADITDLMSKTR
LVKWNYLEGPLYPSCTGKHVRSVCIYGAGELRWLLNYGSWFANKVDAKVDPVLIQCLEDK
LQEKQRLLVKAMKSQQKIPSSVLAVDVILQ
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataagatttgcctttccaagcagactgcggaagaagaatttcatttcttcttta
tcattgctgctggtgatctgtgccttcttgctgctcttcctaaagttcactgttaaatac
agcattaccattgaaacctatgggtctaccgcaggctacaatgacgttgagctgctccat
cgctacaacattgactgcaatgccatctatgaaatggagccggccgagttggggaagtcg
ctggtcatcagaaaacaggtggtggtggaagagcaggacaagagcttggtcaacctgatc
tcaaattgcccgcgatacctcctctcccggggctatggggatgtccaagtgtctgaggag
gagcaggccttccccctggcctactcactggtggtccacaagtctgcctccatggtggag
aagatcctcagggccgtctacacccctaacaacatctactgtatccactacgacctgaag
tcatcagaactgttcagagagtccatggagggtctggcacgctgtctacccaacgtcttc
atcgcctctaagctggaggcagtgacgtatgccagcatcagccgcctcaatgctgacctc
aactgcctgtctgaccttataggatcaaaggtcaagtggaggtatgtcatcaacctgtgc
ggtcaggactttcccctgcgctccaacatagagctggtggctgacctgaagaagctccgg
gggggtaacatgatggagacaagtcgccccagcgaatacaagaagcagcgtttctccttc
caccacgagctgcagaacgtgtcattcgagtaccaccggctgccagtgaaaaccaacaag
gccaaggggcctccgccgcacggcatacagatgttcatcggcagcgcatacttcgtgctc
tcgctggagttcgtcacttatatgaacaagtctgcgctggccaaggacttcctgatgtgg
tcaaatgacacctactccccagatgaacacttctgggccacgctgacacgggtgccgggc
gtgccaggtgaggtgccacgggcccaggccgacatcacagacctgatgagcaagaccagg
ctggtgaagtggaactacctggagggaccgctttacccatcatgcacaggcaaacacgtc
cgcagtgtgtgtatctatggggcgggggagctgcgctggctactgaactacggcagctgg
ttcgctaataaggtggacgccaaagttgacccggtccttatccaatgtcttgaggataaa
ttacaggagaaacagagactcttggtcaaggctatgaagtcacaacaaaagattccctcc
tctgtgttagcagttgatgttattcttcaataa
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