KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112214467
Entry
112214467         CDS       T05605                                 
Symbol
wdr36
Name
(RefSeq) WD repeat-containing protein 36 isoform X1
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    112214467 (wdr36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:otw03009]
    112214467 (wdr36)
Ribosome biogenesis [BR:otw03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    112214467 (wdr36)
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_HPS5 WD40_RFWD3 Cytochrom_D1
Other DBs
NCBI-GeneID: 112214467
NCBI-ProteinID: XP_024228990
LinkDB
Position
LG20:complement(7533094..7555328)
AA seq 894 aa
MPVGSKKGSVIFSGFRALGLYSNHLSHVVRYHKKHREFYIVTAVGNCFHTYNVKKLGIVA
VSNALPEDISCLAADRMLVYVAIGGKVSAFARNKEVVHMYTGHGADVHLLLPFGDHIISV
DRDNAVIVWDVESEEEYLQITFDKVSFEVSAVMHPSTYLNKILFGSSQGGLQLWNVKSNK
LLYTFTGWPSGVTVLQQTPAVDVVGVGLSSGQIIIHNIKFDESLMKFQQDWGPVTSLSFR
TDGHPVMAVGSPIGHIGLWDLEEKKLVCQMRDAHNTAIAGLTFLHGEPLLITNGADNGIR
VWIFDTAGGGGRLLRSRLGHSAPPTKVRHHGLNGHHILSAGQDGTLQSFSTVHERFNRSL
GHGSINKKKSKKKGLRYDKLKLPAITTFASESARQSDWDSIVACHRGYLMTTTWNYQKGS
MGAHKLEPKRFNKNRALSVHATAVDITSCGNFVVIGLSSGHIDVYNMQSGMHRGQYGEDK
AHSGAVRGVSVDGLNQLTVSAGADKLVNIWKFKSRKLVLSIDLGTSPATTHLHRDSGMFA
IALDDFTLNVLDMETKRIVRKFSGHRGQVNDMAFSPDGRWLITAAMDCTIRTWDLPSGCL
VDCFLVDFAAVSLTMSPTGDFLASSHVDNLGIYLWSNNTLCSMVSLRPLPADYEPTGIML
PGTCSSQDEEGEGDADLNTEMIEYESPEQLDEQLVTLSLLADSRWKNLLHLDIIKKRNKP
KEPPKVPKAAPFFMPTIPGLIPQFAPSEGSNQGEQSKIVNFGVLAQKSHFYQQLESAMLS
NKYNDPVGLLKEMGPSGIDAELRGLAPDMGGDVSVLQGFLKMVASMLDSKRDFDLAQAYL
ALFLKLHLRLISQEPGLMEEASKVSEKLEETWTSMQTLFNQSLCLLSYTKSALL
NT seq 2685 nt   +upstreamnt  +downstreamnt
atgcctgtgggtagtaaaaagggaagcgttatattttcaggcttcagagcattgggactg
tattcgaatcacctctcacacgtggtacggtaccataagaaacatcgagaattctacatt
gtaacagccgtgggaaactgtttccacacgtacaatgtcaagaaacttggaatcgttgct
gtcagtaatgcacttccagaggacatatcatgcctagcggctgatcggatgctggtctat
gttgcaattgggggaaaagtatcagcatttgccaggaacaaagaggtcgttcacatgtac
accggccatggagctgatgttcatctcctgctgccttttggggatcacatcatttctgta
gaccgggacaatgctgtcattgtttgggatgtggagtcagaggaggagtacctgcagata
acatttgacaaagtgtcatttgaggtgtctgctgtaatgcacccaagcacttacctgaac
aagatcctgtttgggagtagccaaggaggtctccagctctggaatgtcaaatccaacaag
cttctgtacaccttcactgggtggccatcaggagttacagtgcttcagcagaccccagct
gtggacgttgtaggagttggcctatcatcgggtcagatcatcatccacaacatcaagttt
gatgagtcactgatgaagttccagcaagactggggcccagtcacttccctttccttcaga
acagatggccatccagtaatggcggttggtagtcctattggacatattgggctgtgggat
ctggaggagaagaagcttgtttgtcagatgagagatgcccacaacacagctatcgctgga
ctaacattcctccatggcgagcctcttctcatcaccaatggggctgataacggcattcgg
gtgtggatctttgacacggcggggggaggaggccgtttactcaggagtcgtctgggacac
agcgccccgcccactaaggtccggcaccacggcctgaacggacatcacattctcagtgct
ggtcaagatggtactctgcagtcgttctccactgttcatgagagattcaacaggagttta
ggacatggttccatcaacaagaagaaatccaaaaagaaaggcttgaggtatgacaaacta
aagcttcctgccatcaccactttcgcctcagaaagtgcccgccagagtgattgggacagt
atagtggcatgtcatcgagggtacctcatgacgaccacctggaactatcagaagggcagc
atgggagcacacaagctggagccgaaacgcttcaacaagaaccgcgctctcagcgtccat
gctacggcggtagatatcacatcttgtggtaacttcgtggtgataggactctcatctgga
catattgacgtttacaacatgcagtctggcatgcatagaggtcaatatggagaggacaaa
gctcacagtggggcggtgcgcggcgtgtcggtggatggactcaaccagctgaccgtgagt
gccggagctgacaaactggtcaacatctggaagttcaaatctaggaagctggtcctctcc
attgacctgggcacctcgcccgccaccacacacttgcaccgggacagtgggatgtttgcc
atcgcgctggacgacttcactctcaatgttctggacatggagaccaagagaattgtccgc
aagttctctggccatcgaggacaggtcaatgacatggctttcagtccagatggtcgctgg
ttgataacggcagccatggactgtactatcaggacatgggaccttccctctggctgcctg
gtggactgcttcttggtcgactttgctgcagtcagtctgaccatgtcacccacaggggac
tttctagcctcctcccatgtcgacaacttggggatctacttatggtccaacaacacgctg
tgcagtatggtgtcgctgcgccccctgcctgcagattacgagcccaccgggatcatgctg
ccaggaacctgttccagccaagatgaagagggagagggagatgctgatctcaacactgag
atgatagaatatgagtctcctgagcaactggacgagcagctggtcaccctctctctgctg
gccgactctcgctggaagaacctgctgcacctcgacatcatcaagaaacggaacaaacca
aaggagccccccaaggttccaaaggctgcccccttctttatgcccaccatcccaggacta
ataccacagttcgccccctctgaaggctccaaccagggggaacagtcaaagattgtgaat
tttggagtcctggcacagaagtcccatttctaccaacagctagaatctgctatgctcagc
aacaaatataatgaccctgtggggttgctgaaagagatgggtccgtctgggattgatgct
gaactccgaggcctggcccctgatatgggtggagatgtctccgtcttacaaggtttcctg
aagatggttgccagcatgctggactccaagagagactttgatctggcacaggcctacctg
gctctcttcctaaagctgcatcttagactgatctcccaagaaccagggctgatggaggag
gcgtctaaagtatcagagaaactggaggagacgtggacatccatgcagacacttttcaat
cagagcctgtgtttgctgtcatacaccaagagtgcactgctttga

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