Oncorhynchus tshawytscha (Chinook salmon): 112214500
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Entry
112214500 CDS
T05605
Symbol
si:ch211-200p22.4
Name
(RefSeq) phosphatidylinositol-binding clathrin assembly protein isoform X1
KO
K20044
phosphatidylinositol-binding clathrin assembly protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112214500 (si:ch211-200p22.4)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112214500 (si:ch211-200p22.4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
ENTH
Motif
Other DBs
NCBI-GeneID:
112214500
NCBI-ProteinID:
XP_024229051
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All DBs
Position
LG15:complement(16261594..16319501)
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AA seq
641 aa
AA seq
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MSGQSITDRIAAAQHSMTGSAISKAVCKASTHEVSGPKKKHLDYLIHCTNEMNVSVPQLA
DTLFERTANSSWVVVFKALITTHHLMMYGNERLIQYLASRNTLFNLNNFLDKGALQGYDM
STFIRRYSRYLNEKAMSYRLVAVDFTKMKRGIDGVMRTMSIEKLIKTLPIIQNQLDALLD
FQANPNELTNGVINSAFMLLFKDSIRLFAAYNEGVINLLEKYFDMKKGQCKDALDIYKKF
LYRMTKLSEFLKVAEQVGIDQGDIPDLSQTIKGSCIAPSSLLEALEQHLASLEGKKTKEL
TADTRASTLSSAVSSLSNTGMSFSRMDEKERQQALEEEQARLQALKVQDQRLKEIGMSTP
SASPSTQSMGSVNNNHHNTNQGMELFSAPSTNSMPNLSSDLFDLQPAFLPAVQSTPSIST
ATSAWGGAAETAESSMSVDFDAVFGGGARRQANYDVQPATDGFDALGDLLKPTVPSHNQA
PPMALHHPGHPHPGHPGGKLLPNDLDSSLANLVGNLQFGGAPAKNLSLCAPVFRPDMQWS
QPGEKKLTGGHNWQSKTMTSTTAWNPAPMAPAPMPVQHMAPAPMTFPMTTPQVPMYGMVP
PQMGQMGSVQLMAPQPMMYNQPVLRPTNPFAPMPGAQMQFM
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggacagtctataacggatcggatcgccgcggcacagcacagcatgaccgggtcg
gctattagcaaagccgtgtgcaaggcctcgacgcacgaagtcagcggtcccaagaagaaa
caccttgattacctgatccactgcaccaatgagatgaacgtctctgtcccccagctggca
gacacactgtttgagagaacagccaatagtagctgggtggtggttttcaaagccctcatc
actacacaccacctcatgatgtacggcaatgagcgtctcatccagtacctggcctctaga
aacaccctcttcaacttgaacaacttcttggacaaaggtgctttgcaaggttatgacatg
tctacgttcatccgtcggtacagccgctatctgaatgaaaaggccatgtcttacaggctg
gtggctgtggactttaccaagatgaagagagggattgacggtgtgatgcgtaccatgagc
atagagaagctcataaagacccttcctattatccagaaccaactagacgcactgctagac
ttccaggccaaccccaatgagttaactaacggggtgatcaactcagccttcatgctgttg
ttcaaggactccatccgtctgtttgctgcctacaacgagggcgtcatcaacttactggag
aaatattttgatatgaagaagggtcagtgtaaagacgcattggacatctataagaagttc
ctttacaggatgaccaagctgtcagagtttctcaaagtagcagagcaagttggaatagat
cagggtgatatccccgatctctcacagaccattaaaggatcatgcattgctcctagtagt
ctcctggaggctctggagcagcacctagcctctctggaggggaaaaagaccaaggaactc
accgctgatacaagagcgtccacactgtccagtgctgtgtcgtctctgtccaatacaggc
atgtcattcagccgcatggacgagaaggagagacagcaggccttagaggaggagcaggcc
agactgcaggccctcaaggtacaggaccagcgtctgaaggagattggcatgtccactcca
tctgcctccccaagtacacagtctatgggcagtgtcaacaacaaccaccacaacaccaat
caaggcatggagctattcagtgcaccctccaccaacagcatgcccaacctcagtagtgat
ctatttgacctgcagccagctttcctacctgctgtccagagcactccctcgatctctaca
gccaccagtgcctggggaggtgctgctgagacagctgagtcctccatgagtgtagatttt
gatgctgttttcgggggcggggctagaagacaggccaattacgacgtacagcctgccacc
gatgggtttgacgctctaggggacctgctgaagcccacagtgcccagccacaaccaggct
cctcccatggccctgcaccaccctggtcatccccatccagggcacccaggaggcaagctg
ctgcccaatgaccttgactcgtcccttgccaacctcgttggcaatctgcagttcggagga
gccccagccaagaatttgtcgttgtgtgctccggtgttcaggccagacatgcagtggagt
cagcctggagagaagaagctaactgggggacacaactggcagagcaagactatgactagc
accacggcctggaaccctgctcccatggcccctgcacccatgcctgtacaacacatggct
ccagctcctatgacattcccaatgacgacgccgcaagtgcctatgtatggaatggtcccc
cctcaaatgggtcagatggggagtgtacagttgatggccccccagcccatgatgtataac
cagcctgtactcagacccaccaatcccttcgcccccatgcctggagcccagatgcagttc
atgtaa
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