Oncorhynchus tshawytscha (Chinook salmon): 112214550
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Entry
112214550 CDS
T05605
Name
(RefSeq) dynactin subunit 1 isoform X3
KO
K04648
dynactin 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112214550
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112214550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112214550
03036 Chromosome and associated proteins [BR:
otw03036
]
112214550
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112214550
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112214550
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
112214550
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
112214550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
112214550
NCBI-ProteinID:
XP_024229136
LinkDB
All DBs
Position
LG15:18513510..18540668
Genome browser
AA seq
1289 aa
AA seq
DB search
MAGMRRRHSVAVPAMGLGIGRGSLLFSSPLLSKMSADGGGKPAKVGSVVEVIGKGQRGTV
AYVGATLFATGKWVGVILDEPKGKNDGTVQGKRYFQCDENCGIFVRQSQIQLVEDGSSAT
SPDTPEAATAKFLPKQKDIPETPKSVKQMPIPKKFVTRRSTKTPRVLATPASGLSSSLSR
EDVSEGSLSSKGALGAPVVPLPSGTPTTPGAPPPATPSKAEPPVAKQEEESLRGQVKDLE
EKLETLKMKRAEDKVKLKELEKYKIQLEQLQEWKTKMQEQQADLQKQLKEAKKDAREALE
SKDRYMEEMSDTADAIEMATLDKEMAEERSESLQVEVESLKEKVEELTMDLEIIKHEVEE
KGSDGAASSYHVKQLEEQNSRLKEALVRMRDLSSSEKQEHVKLQKQMEKKNGELETLRTQ
KEKLQEEMKQAEATIDELKEQVDAALGAEEMVETLTERNLDLEEKVRELRETVTDLEAIN
EMNDELQENSRETEMELREQLDLNGARVREAQKRVEAAQETVADYQQTINKYRELTTSLQ
DTNRELTIAQNANAEQVQQPPAELFDFKIKFAETKAYAKAIEMELRKMEVGQANRQVSLL
TSFMPDSFLRHGGDHDCILVLLLIPRLICKAELISKQAQEKFDLNGNPVERTGMKMRGPP
GEQLSFASGLVYSLTLLQATLHKYEQSLNCCSVEVYKRMGTLYSEMSVHERSLDFFIDLL
HKDQLDETVHVEPLTKAIKYYQQLYSIHLADQTEDCTVQLADHIKFIQSALDCMGAEVVR
LRAFLQPGQEGADLNILLKDLDTSCSDIKQFCKKIRRRMPGTDVPGVPAALAFGAPVSET
LTDCRRQLTRVVAVLQEVAAAGAQMVAPLGEQEGLNTLKLEDVAFKAVEQVYGSHGLNPH
ECLRQSCSSVISTMNKMATAMQEGEYDAERPQGKTPPVEARAVALRAEITDAEGLGVKLE
DRDTVIKELKKSLKIKGEELSEAHVRLSLLEKKLDTSTKDADERVEKIQTKLDETLALLK
KKEKEFEETMDALQADIDQLEAEKAELKQRLSNQSKVTIEGLRAPPASGIASIVSGTAGA
GVAPGAGGLSGPMQVVDSPLLRQQVETQRLGIKHLKNENNRLKAEKMRAQLASLPPLHVP
KLPLREASTSPPAEGPLHGALYRKTDQLLGTLLKMSAAVKVVDITGKTPVSASAQLLDQT
ARLQSLSDALDKLKGEVSEHVVSQQPGAKVSSDFATFPISSFVKAKEEKQGGTVFIGRVA
IPCAKGQEQVHRLVLSQQHLQQVHRLLMT
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggctggaatgcgcaggcggcattctgtggccgtcccggcgatgggcctgggtattggc
cggggcagcttgctcttcagcagccccctcctgagcaagatgagtgcagacgggggcggc
aagcctgccaaggtgggctcggtggtggaggtaatcggtaagggtcagcgtggcacggtg
gcttacgtgggcgccacgctcttcgccactggtaagtgggtgggcgtgatcctggacgag
cccaagggcaagaacgacggcacggtccaggggaagagatactttcagtgtgatgagaac
tgtggtatcttcgtgcgccagtcccagatccagctagtggaagatggatccagtgccacc
tctccagacaccccagaggcggccactgccaagttcctgcccaagcagaaagacattcct
gagactccgaaatcagtcaaacagatgcccattcccaagaagttcgtaacccgccgtagt
accaagaccccccgagtcttagccaccccggcctctggtctgtccagctctctttccagg
gaggatgtcagtgagggcagcctgtcttccaagggtgcactgggggctccagttgtcccc
ctgcccagcggcacccccaccacgcccggtgctcctccccctgccacccctagcaaggct
gagcctcccgtagcgaagcaggaggaggagtctctgcgaggtcaggtgaaggatctagag
gagaagctggagaccctgaagatgaagcgggcagaggacaaggtcaagctgaaggagctg
gagaagtacaagatccagctggagcagctgcaggaatggaagaccaagatgcaggagcag
caggccgacctgcagaaacaactcaaggaggccaagaaggatgctcgggaggccctggag
tctaaggaccgctacatggaggagatgtcagacacggcagacgccatcgagatggccaca
ctggacaaggagatggccgaggagcggtcggagagcttgcaggtggaggtggagtcactg
aaggagaaggtggaggagctcaccatggacctggagatcatcaaacacgaggtcgaggag
aaaggttctgatggagctgcctccagttaccatgtcaagcagctggaggagcagaacagc
agactgaaagaggctctggtcaggatgcgtgacctgtcttcctctgagaagcaggagcat
gtgaagctccagaagcagatggagaagaagaatggagagctggagactctgaggacccag
aaggagaagctacaggaggagatgaagcaggctgaggccaccattgatgagctgaaggag
caggttgatgctgctctcggggcagaggagatggtggagactctgactgagaggaatctg
gacctggaggagaaagtccgagagctcagagagactgtcacagacctggaagcgatcaac
gagatgaatgacgagctgcaggagaacagcagggagacggagatggagctgagggagcag
ctggacttgaacggggccagggtgagagaggcccagaagagggtggaggccgctcaggag
acggtggctgactatcagcagaccatcaacaagtatcgcgagctgaccaccagcctacag
gataccaacagggagctgaccattgctcagaatgccaatgcagagcaggtccaacagcca
cctgcagagctgtttgacttcaagatcaagtttgctgagaccaaggcctacgccaaggcc
atcgagatggagctgagaaagatggaggtgggccaggccaacagacaggtgtctctcctc
acctccttcatgcccgactccttcctgcgtcatggaggagaccacgactgtattctggtg
ctcttgctcataccaagactcatttgcaaggctgagttgatcagcaagcaggcccaagag
aagtttgatctgaatggtaacccagtggagaggactgggatgaagatgagaggaccacct
ggagaacaactcagctttgcctctggactggtgtattctctaaccctgctacaggccacg
ctgcacaaatatgaacaatctctgaactgctgcagtgtggaggtgtataagcggatgggg
actctctactcagagatgagtgtccatgagcgttctctagacttctttatagacctgctg
cacaaagaccagctggatgagactgtacacgtggagcctctcaccaaggccatcaagtac
taccagcaactgtacagcatccacctggctgatcagactgaagattgcaccgtgcagctg
gctgatcacatcaagttcatccagagtgcattggactgtatgggtgcagaggtggtgcgt
ctcagggccttcctgcagccggggcaagagggggctgacctgaacatcctgctgaaggac
ctagacacatcctgcagcgacatcaaacagttctgcaagaagatcagacgcaggatgcca
gggaccgacgtgccaggggtgcccgccgctctggccttcggcgcaccggtgtcagagact
ctaacggactgcaggcgtcagctgactcgggtggttgccgtgctacaggaggtagctgcg
gcgggggcgcagatggtcgcccctctaggagaacaggaggggctcaacaccctcaaactg
gaggacgtggccttcaaggctgttgaacaggtgtatgggtcccatggcctgaatccccat
gagtgtctgcgtcagtcctgcagctctgtcatctccaccatgaacaagatggctaccgcc
atgcaggagggagagtatgacgccgagcgaccacagggaaagactcccccggtagaggct
cgtgcagtggccctcagggcagagatcactgacgcagagggtctgggagtcaaactggag
gacagagacactgtcatcaaggagctcaagaagtccctgaagatcaaaggagaggagttg
agtgaggcccacgtccgtctcagcctgctagagaagaagctggatacgtccactaaagat
gcagacgaacgtgtggagaagatccagaccaaactggatgagaccctcgccctgctcaag
aagaaagagaaggagtttgaggaaaccatggatgccctgcaggcagacatcgaccagctg
gaggcagagaaagcagagctgaagcagcgtctctccaaccagtcaaaggtgaccattgag
ggcctcagggccccgcctgcctctggcatcgcatccatcgtttcaggaaccgccggagcg
ggtgttgccccaggagcagggggcctgtctgggccgatgcaggtggtggactcccctctc
ctccgtcagcaggtggagacccagagactgggcatcaaacacctgaagaacgagaacaac
agactgaaggcggagaagatgagagcccagttagcctccctccctcccctccacgtcccc
aagcttcctctgagagaggcctccacctctccccctgctgaggggcctctccacggggct
ctctacaggaagacagaccagctcctggggaccctgctcaagatgagtgccgccgttaag
gtggtcgacatcaccgggaagactccagtgagtgcgagtgctcagctcctggaccagaca
gctcgactgcagtctctgagtgacgctctggacaaactgaagggtgaagtgtcagagcat
gtggtttctcagcaacctggggcgaaggtctcctctgactttgccaccttccccatttcc
tccttcgtcaaggccaaggaggagaagcaggggggtacggtgttcatagggcgcgtggcc
atcccatgtgccaagggccaggagcaggtgcaccgtcttgtcctatcacagcagcacctg
cagcaggtgcaccgcctcctcatgacctaa
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