Oncorhynchus tshawytscha (Chinook salmon): 112214651
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Entry
112214651 CDS
T05605
Symbol
ttc5
Name
(RefSeq) tetratricopeptide repeat protein 5
KO
K24928
tetratricopeptide repeat protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112214651 (ttc5)
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
Others
112214651 (ttc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC5_OB
TPR_2
TPR_16
TPR_8
TPR-S
ChAPs
Motif
Other DBs
NCBI-GeneID:
112214651
NCBI-ProteinID:
XP_024229327
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Position
LG09:complement(60510070..60515700)
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AA seq
442 aa
AA seq
DB search
MAEVDKDGDPAAEKDDLQILKELVDELYHFRDHYFETHSVEDAGRKQSDVAQEMEKTLTK
LREKEESYKHSAEFLLLRGRCLGVAPEFSTTAEECLSRAVKLEPGLVEGWNILGEQYWKK
GDLTTAKTCFTGALQQKKNKVSLRSLSMVLRQLPGVDEQGKRVLESVDMARQAVQLDVTD
GTSWYILGNAYISLFFTCGQNPQMSQQALSAYAQAEKVDRTETSNPDLHFNRATLFQYEE
MFGSALGGYSRAAALDPAWEEPPERERQLMEYLEKLTALTENKGKVKARRLRTMLSNLST
SALGPCSSPQFRSPAGRVGSLEPRNLSALTHGHNTGVAALGKVVFSLASEGRMAFTFGMV
DSEETCCVIMVYNTADSWGVLIGDSVVIPEPQVKRHSVAHKDQTFDFRSIRVDSPLLLVV
NGKRQNVQAQTAASVSYKPQSE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtggataaggatggcgatcctgcggctgagaaagatgacctacagatttta
aaggaactagtggatgagttgtatcattttcgggatcattactttgagactcacagtgtg
gaggatgcagggaggaaacagagtgatgtggcacaggagatggagaagactctaacgaag
cttagggagaaagaagagtcgtataagcacagcgctgagttcctgctgctgcggggccgc
tgcctgggggtggcaccagagtttagcaccaccgccgaggagtgcctgtccagggctgtg
aagctggaacctgggctggtggagggctggaatatcctgggggagcagtactggaagaaa
ggagacctgaccaccgccaagacttgtttcactggagccctgcagcagaaaaagaacaag
gtgtctctgcgcagtctgtccatggtgctgaggcagctaccgggcgttgatgagcagggg
aagagggtcctggagagtgtggacatggccaggcaggctgtacagctggacgtcacagac
ggcacctcctggtacatcctaggaaacgcctacatctccctgttcttcacctgcggacag
aatccacagatgtctcaacaggctctgagtgcctatgcacaggctgagaaagtggaccga
acagaaacctccaaccctgatctacacttcaacagagccacgctgttccagtatgaggag
atgtttgggtctgcgctgggggggtacagccgggctgcggcactggaccccgcatgggag
gagcctccagagagggagaggcagctgatggaatacctggagaaactcacagcactcaca
gagaacaaggggaaggtgaaggcccggcgcctgcggacaatgctctccaacctcagcacg
tcggccctggggccgtgctcctcccctcagttccgctcccccgcaggccgcgttgggagc
ctggagccccgcaacctgtctgccttgacacacggccacaacactggggtggctgccctg
ggcaaggtggtgttcagcctggcctctgagggacgcatggcctttacgtttggcatggtg
gacagtgaggagacctgctgcgtgatcatggtttataacacggcagacagttggggtgtt
ctgattggcgactcagtggtcatcccagagccccaggtcaaacgccacagtgtagcccac
aaggaccagacgtttgacttccgcagtatacgagtggactctcccctactcctcgtcgtc
aatggcaagagacagaatgtccaggctcagactgcagcctccgtcagttacaagccccag
agtgaatga
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