Oncorhynchus tshawytscha (Chinook salmon): 112214660
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Entry
112214660 CDS
T05605
Symbol
chrnb1
Name
(RefSeq) acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112214660 (chrnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112214660 (chrnb1)
Ion channels [BR:
otw04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
112214660 (chrnb1)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
112214660
NCBI-ProteinID:
XP_042154206
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All DBs
Position
LG15:20374379..20403008
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AA seq
495 aa
AA seq
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MRALDLLLLLCCLCGLYAVGGASEGEKQLMKALFKNYNLKVRPTASPGAKVVVRIGMILS
SFVSLNMKAEEMSTIVIMNLEWTDHRLSWKPKDNDGIEVMRLPAGKVWLPDIVLINNNDG
VFDVALHVAVQAYSSGRVTWSPPALFCSSCGVKVTYFPFDWQNCTMVFKSYTYDSSEVDL
QHALDDQGNEIKEIQYDGGFSESGEWYIRHQPSRKNEIREDLYEDITFYLIIERKPLYYV
FNIIIPCILLTCIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLADKVPETSLGVPIIV
NYLMFTMILVTVSVILSVVVLNLHHRSPSTHHMPMWVRKIFIHMLPPYLGMLRPKVEMPL
SLDQPPRREKNNMAISRAADEYFIRKPNTCFLFPKPNRYQSEGMCTDLRKFIDGPSHYLT
LPPELKTAIEAIIYIAEQLQAEKDFAALKEDWQYVAMVVDRMFLWIFVVFTTVGTLGIFA
DASFNHTPSDPFKYP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagggccctggacttgctcctgctgttatgttgcttgtgtggcctatacgcggtggga
ggtgcgtcggagggggagaagcagctgatgaaagccctgttcaagaactacaacctgaag
gttcgccctacggcctcacctggcgccaaggtggtggtccggattggcatgatcctctcc
tccttcgtcagcctgaacatgaaagcagaagagatgagcacaattgttatcatgaacctg
gagtggacagaccaccgtctctcctggaaacctaaagacaatgacgggatcgaggtgatg
cgacttcctgctgggaaggtctggctgcctgacatcgtcctcatcaacaataatgatggt
gtgtttgatgtggccctccatgttgctgtccaggcctatagtagtgggagggtgacctgg
tctccccctgccctcttctgtagttcctgtggggtcaaggtgacatacttcccatttgac
tggcagaactgcaccatggtgttcaagtcttacacctacgactcatcagaggtggacctg
cagcacgctctggatgaccagggcaacgagatcaaagagatccaatacgacgggggcttc
agtgagagtggtgaatggtacatccgccaccagcccagcaggaagaatgagatccgtgag
gacctgtatgaagacatcaccttctacctgatcatcgagaggaagcctctctactatgtc
ttcaacatcatcatcccatgtatcctccttacctgcatagccatcttcaacttctacctg
ccgcccgacgctggtgagaagatgggtctgtccatcaatgttctgctcaccctgactgtg
ttcctgctgctgctggctgacaaggtccccgagacctccctgggtgtccccatcattgtc
aactacctcatgttcaccatgatcctggtcaccgtctcagtcatcctcagtgtggtggtc
ctcaacctgcaccaccggtccccctccacacaccacatgcccatgtgggtccgcaagatc
ttcatccacatgctgcccccctacctgggcatgctgcggcccaaggtggagatgcccctc
tccttggaccagccccccaggagggagaagaacaatatggctatcagccgcgctgctgac
gagtatttcatacgcaagcccaacacctgcttcctgttccccaaacccaacaggtaccag
tctgagggcatgtgtactgacctgaggaagttcatcgacggacccagccactacctcact
ctgcctccggagctcaagactgccatcgaggccatcatctacatcgctgagcagctacag
gctgagaaggactttgctgctctgaaggaggactggcagtatgtagccatggtagtggat
cgcatgttcctgtggatctttgtggtcttcactactgtgggaacgctgggcatcttcgcc
gacgccagcttcaaccacacccccagcgacccctttaagtacccctaa
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