Oncorhynchus tshawytscha (Chinook salmon): 112214667
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Entry
112214667 CDS
T05605
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2 isoform X4
KO
K15516
fragile X mental retardation protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112214667 (fxr2)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112214667 (fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
112214667 (fxr2)
mRNA cycle factors
Stress granule specific factors
112214667 (fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
KH_1
FXR_C1
Agenet
KH-I_KHDC4-BBP
DUF150_C
Motif
Other DBs
NCBI-GeneID:
112214667
NCBI-ProteinID:
XP_024229347
LinkDB
All DBs
Position
LG15:complement(20535623..20562743)
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AA seq
661 aa
AA seq
DB search
MDGLAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPADYNKDIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTHERIRPVNPNSP
SSRNSFHKVPIAIPEDLRNICANDNIHKDFRKAIGANCIFYSAASHELIVLSTNETTVKR
AALLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVKVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEESCTFRIYGETPEAVKLARVFLEFKEDYFQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDKKLPREEGMVPFVFVGTKENISNAQALLEYHVAYLQE
VEQLRLERLQIDEQLRQIGVGYRAPPSRVGGTGPGDREKGYLTDESSNSTNLHTSRTYGG
RGRGRRPSNSQYSGYGTNSEQSNASESEDLNERDQRPRGVGGDERGSRRGGRGRGSNTGR
GRGGPASRTTNSISSVLRDPDSNPFSLLEGESEQGDTDTSEGVGGVDRRRRSRRRRNDQE
PSVMDAAATESDSQVGPNENGLDEEGRPQRRNRSRRRRNRGNHPEGGSPSRDRQPAEVTV
ADYISRAESQSRQSLPQETLAASEPKENGSSAKKDERMVPSKRSPSNGMATPSETLVNGV
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggacgggttggcggtggaggttcgcggctcgaacggggccttctacaaggggttcatc
aaagatgtccacgaagactcactcacaatagtattcgaaaacaactggcaaccagagaga
cagctgcccttcagtgacgttcggctgccgcccccagccgactacaacaaggacatcggt
gagggagaggaggtggaggtgtactcgagggccaatgagcaggagccatgtggctggtgg
ctggcccgggtgagaatgatgaagggagagttctacgttatcgagtacgcagcgtgcgac
gccacatacaacgagatcgtcacgcacgaacgcatccggcccgtcaaccccaacagccct
tcctcccgaaactccttccacaaggtccccatcgccatcccagaagacctacggaacatc
tgtgcgaacgacaacatccataaagacttcaggaaagccattggagccaactgcatcttc
tacagtgcagcctcacacgagctcatcgtgctgtcaacaaatgagacaacagtgaagcgt
gctgctctcctgagcgacatgcacttccgcagcatccgtaccaagctcatgctcatgtcc
cgcaacgaagaagccactaaacaccttgagacaagtaagcagctggcgtccgcgtaccag
gaagaggtgaaggtaagggaagacctgatgggtctggccattggctcccacggtgccaac
atccagcaggccaggaaggtgcctggtgtcaccgccatcgaactggaggaggagagctgc
accttcaggatctacggagagaccccagaagcggtgaagctggccagggttttcctggag
ttcaaagaagactacttccaggtgccaaggaaccttgtaggaaaagtgatcggcaagaac
ggcaaagtcatccaggagattgtggacaagtcgggggtggtgcgggtccggatcgagggg
gacaatgacaaaaagcttccccgtgaggagggcatggtcccctttgtctttgtgggaact
aaagagaacatcagcaacgcccaggccctactggagtaccatgtggcctacctacaggaa
gtggagcagctgcgtctggagcggctgcagattgacgagcagctccgtcagatcggggtg
gggtaccgtgctccccctagtcgggtcgggggcaccgggcccggggacagggaaaagggc
tacctcacagacgagagcagcaactccaccaacctccacacctcccgcacctacggaggc
cgcggacgaggacgcaggccctccaacagccagtactctggatatggtactaactctgaa
cagtccaacgcttctgagtcagaggacctcaacgagcgcgaccagcggccccgaggcgtg
ggcggagatgagaggggttcccgtcggggtggcaggggccgtggatccaacaccggacgg
ggtcgcggaggacccgcctcaaggactaccaactctatcagctcagtgctgagggacccg
gacagcaacccgttctccctgctggagggtgagagtgagcagggcgacacggacaccagc
gagggagtgggaggagtagaccgcaggagacgctcccgccgtcgccgtaatgaccaggag
ccaagcgtgatggacgccgccgccacagagtcagacagccaggtcggacccaacgagaac
ggactggatgaggagggccgaccccagcgccgcaacaggagccgccgccgtcgtaaccgc
ggcaaccaccccgagggaggatcccccagccgtgacagacagccagccgaggtgaccgtg
gcagactacatatcccgcgccgagtcgcagagccgacagagccttccccaggagacactt
gctgcttccgagcctaaagagaacgggagcagcgccaagaaggacgagcgcatggtgccc
tccaagcgttcccctagcaacggcatggccacgcccagcgagaccctggtcaacggcgtc
tcgtag
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