Oncorhynchus tshawytscha (Chinook salmon): 112214689
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Entry
112214689 CDS
T05605
Name
(RefSeq) oocyte zinc finger protein XlCOF6
KO
K09228
KRAB domain-containing zinc finger protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112214689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112214689
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112214689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_11
zf-met
zf-C2HC_2
NUP50
Motif
Other DBs
NCBI-GeneID:
112214689
NCBI-ProteinID:
XP_024229374
LinkDB
All DBs
Position
LG15:complement(21121591..21128080)
Genome browser
AA seq
663 aa
AA seq
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MWQPDPFHNELVSIMDELMMSFEDEIDKCMAVSVFSTQHSTGIVDAGKTGESKLEVKVQL
KCVMKQFVTKTIIKINHLISKGTAALCSKICQSQSEVKSLKIRLLEMTDGKEIPEKTVGR
TPQILEEQEWTGLPYSPEFAEYLEVEVPTPIDEADKTTNCKETTIRVKTIEMKQCFISLA
KLASSLTKSNKQGPNTAKQEASRPTDREAESRPTDIQALSTDAQSLSGDSVLSTIPRREK
KRTEAPMVAQSDGSKENADDDQWEEENANAGQTSSDESLHNRKPRPNRKQNKTTNTRKEY
LCPDCGKVFKKLCNFKQHQRTHTGERPYCCELCGKCFPTAWKLRNHQLVVHRREKPLECP
TCGKCFATKSYLDKHASVHSTEKPFQCLVCQKCFKSKNGLKEHTILHNSNSNSYACDKCP
KTFVKLKYLKNHQLTHSGGGAHRCELCGKGFKSPSELKQHQASVHRGEKPFQCPTCGKCF
GKKENLKIHASVHSEERAFQCSLCRMCFKTKYTLSDHKKTHTDSKPYACGKCPMTFIRSR
YLKMHQASHLTSKPLACSYCGKGFKGERERKRHERTHTEEPPYTCDECGKGFYKHESLKV
HVALHTGEKPFACDYCGKTFALASYLKTHVAKFHSVTELHACGKCGKKYKDIIHFRSHMV
QGC
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagccagatcctttccataatgagttggtatctattatggatgaattaatgatg
tcgtttgaggatgaaattgacaaatgtatggcggtctcagtcttttctacacaacacagc
acaggcattgtcgatgcaggaaagacaggggagtccaagttggaggtaaaagtccagttg
aaatgtgtgatgaaacagttcgtgacaaagactattatcaaaatcaaccacttgatctcc
aaaggtactgcagctctgtgctcaaagatatgccagagtcaaagtgaggttaaatctctg
aaaattaggctattggagatgactgacggtaaggagatacctgaaaagacagtgggaaga
actccacagatattggaagagcaggaatggacgggattaccatattcaccggagtttgca
gagtatttggaggttgaagtgccaactcccattgatgaggctgacaagactacaaattgc
aaggagaccacgatcagagttaaaaccatagagatgaaacaatgctttatatctctggca
aaattagcttcctcactcactaagtctaacaaacaggggccaaatacagccaaacaagaa
gcaagtaggccaacagacagagaggcagaaagcaggcctacagacattcaggccctaagt
acagatgcacaaagtctcagtggggattctgtgctatccactatacccaggagggaaaag
aagagaacagaagcacccatggtggcacaatcagacggaagtaaggagaacgcagatgat
gaccaatgggaggaggagaatgctaatgccggacaaacctcgagtgacgaatctcttcac
aacagaaagccaaggccaaacaggaaacaaaataagactaccaacaccaggaaagagtac
ctctgtccggactgcggtaaggtttttaagaaattatgtaattttaaacagcatcaacgg
actcacacaggagagagaccttattgttgtgaattatgtgggaaatgtttcccgactgct
tggaagctcagaaatcaccaattggtggtccacaggagagagaagccgcttgaatgccca
acatgtgggaagtgctttgcaacaaagagttatttggacaaacatgcaagcgttcattca
acagagaaaccgttccaatgcctcgtgtgtcagaagtgttttaaaagtaaaaatggcctc
aaggaacatacaatattgcacaattcaaattcaaactcatatgcttgtgacaaatgtcca
aaaacctttgtaaagctgaaatacctcaagaatcaccagctaactcacagcggaggagga
gctcaccgttgcgaattgtgtggaaagggtttcaagtctccttccgaactcaaacagcac
caagcatcagtccataggggagagaagccgttccaatgtccaacatgtgggaagtgcttc
ggaaaaaaagaaaatttgaaaattcacgcaagtgttcattcagaagagagagcattccag
tgctctctgtgtcggatgtgtttcaaaaccaagtatacgcttagcgaccataagaagact
cacacggactccaagccgtatgcttgcggcaaatgcccaatgaccttcattcggtcaagg
taccttaagatgcatcaagcctcgcacctgaccagcaagccgttagcgtgcagctactgt
gggaaaggcttcaaaggtgaacgtgagcgcaagagacacgaacgcacacacaccgaagaa
cccccttatacctgtgacgaatgtggcaagggtttctataaacacgaatcattaaaagtc
catgtggccttgcacaccggagagaagccgttcgcctgtgattactgcggtaaaaccttt
gctctggcgtcctaccttaaaacccatgtcgcaaaatttcactctgtgaccgaactccac
gcctgtgggaaatgtggcaaaaaatataaggatatcatacatttcagaagccatatggtt
cagggttgttga
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