Oncorhynchus tshawytscha (Chinook salmon): 112214702
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Entry
112214702 CDS
T05605
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha-like isoform X1
KO
K07202
alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04371
Apelin signaling pathway
otw04910
Insulin signaling pathway
otw04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
112214702
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
112214702
04920 Adipocytokine signaling pathway
112214702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112214702
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
112214702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
112214702
NCBI-ProteinID:
XP_042154296
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All DBs
Position
LG15:complement(24943319..25017321)
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AA seq
1268 aa
AA seq
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MAWDRCNQDSVWRELECAALVGEDQPLCPDLPELDLSELDVSDLDADSFLGGLKWYSDQS
EIISSQYGNEASNLFEKIDEENEANLLAVLTETLDSIPVDEDGLPSFEALADGDVTNASD
QSCPSTPDGSPRNPEPEEPSLLKKLLLAPANSQLSYNQYIGDKAQNHAASNHRIRPPPAV
VKTEISWNSKPRGGCPQQSRLVRRPCTELLKYLTATDDILLQTKASEAKSAWGGGGKDKG
GLLGASSSSSSPSSTTSFSSLSSSSSSIASKKKSSSSSVVSQQQQQQPHHQRGESRAAGE
CSVAGVGAGKWRRCAHGAGGTEGQSEPAAAPAPVPQARRNDSAHARPKLERRPSSEEGRP
PGLQPAVDAGRLAAARFIRYMHSYSLPPRETGQTGSCGRCHKAGAATRAIECWGRHDRGG
AAPRHIAVTVKKREEEPGHPLLSQLLTSKQRPARYQAHLLPPTTTPQPCKSRSSRMSSGV
LERDQCPSQAIEVEEKEHRGTVNIDPCRWGLRQAKEPDSDPLLAEGLGLGSWVSQPDQGL
DLGLGLGWLEVGLVEQADCFGEDVRNDDAIGSPMALSWGLPSPFFPDSRNPDPTPSVTQQ
HLHMQAVCRHPEDQSLPLLAKPTNLPLPLTPESPNDHKGSPFENKTIERTLSVEISGTPG
LTPPTTPPHKVSQENPFKASIKTKLSSCSPSALACKRARLSEAKPCRPLAPTSAPGRKGP
EQTELYAQLSKASTALPTSVVAATTGGCKEERCCGNNKRSVQPRCYGDHDYCQSTATSTK
QDPAAGANTNAANATATMTTTTTTPLKPNPGVAEDRHVECKDSAMPPSPSSSTSTSPPPS
SSSLAKQLQQQQSSSPVGKEARGQDRTPITQDKPHPPQTPEGDQHSASRKQPLRDQDIRA
ELNKHFGRPQQAIYSQGEKGEEVVVEEGRRGGGEMAGALQTPKESPAGYENYPKLSSSGS
GSTGYLHPGLSPFHEELEGQGVEGHFLYPWEGIPLDLLFESCSPSCSLSSCSPSRGSVSP
PSSLLLSPRHFHWPHSGSPSSRSHSRSRSRSSSSHHRRRSLSSSPDGRPSSRSRHNMDSS
TLRSRTHKSPHSQSRSPLSRRPRYDSYEEYQHECLKREEYRQDYQKREFERAEQRERQRE
KAIEERRVVYVGRLRSDSTRTELKRRFEVFGEIEECAVNLRDDGDNFGFITYRYTCDAVA
ALENGHTLRRSNEPQFELCFGGQKQFCKSNYTDLDSHSDDFDPASTKSKYDSMDFDSLLK
EAQCSLRR
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggacaggtgtaaccaagactcggtctggagagaattagagtgtgctgctttg
gttggcgaagaccaacccctctgcccggacctccccgaacttgacctctcagagcttgat
gtcagtgacctggatgcagatagcttcctgggcgggctcaagtggtacagtgaccaatca
gagatcatttccagtcaatatggcaacgaggcttctaacttgtttgagaagatagatgag
gaaaatgaggccaacttgctggcagtgcttacagaaaccctggacagcatcccagtggac
gaggacggattgccttcgttcgaggccctggcagatggggacgtgaccaatgccagtgac
cagagctgtccctccacccctgacggctcgccgcgcaaccccgaaccagaggaaccctcc
ctgctgaagaagctccttctggcgcccgcgaactcccagctcagctataatcaatacata
ggtgacaaggcacaaaaccatgcagccagcaaccaccggatcagaccaccacctgctgtt
gtcaagacggagatctcctggaacagcaagccgagggggggctgtccgcagcagagccgt
ctagtgaggcgcccgtgcaccgagctgctcaagtacttgaccgccaccgacgacatcctc
ctccagaccaaagccagcgaagccaagagcgcctgggggggcggcggcaaagacaaggga
ggcctgctgggcgcctcgtcctcctcctcctcaccgtcctccaccacttccttctcctcc
ctctcctcctcctcctcctcgatcgcctccaagaagaagtcgtcctcgtcgtctgtcgtg
tcacagcagcagcagcagcagccacatcaccagcgaggtgagagccgggctgctggcgag
tgtagtgtggctggtgtgggggctgggaagtggcgtcgctgcgctcatggggctggtggc
actgagggacagtccgaacccgcggcggcacccgctcctgtcccccaggcacgtaggaac
gacagcgcccatgcccgccccaaactggagcgcaggccgtccagtgaagaaggaaggccg
ccaggtctgcagcctgcggtggacgcggggcgcctggcagccgctaggttcattaggtac
atgcattcttattctctccctcctagagagacgggtcagacaggcagctgtgggcgttgc
cataaggcgggcgctgccactcgggcaattgagtgctggggcaggcatgaccgcggtggg
gcggcgcctaggcacatcgcagtgaccgttaagaaaagagaggaggagccagggcatccg
ttgcttagccagctgctgacctccaagcagaggcccgcccgctatcaggcccacttgctc
ccgcccactactacccctcaaccttgcaagagccgttcttcaagaatgagctctggagtc
ctggagagggatcagtgtcccagccaggctattgaggtggaggagaaggagcacagaggg
actgtcaatatcgatccctgcagatggggtctcagacaggccaaggagcctgattcggac
cccctgttggcagagggcttaggcctaggcagctgggttagccagccagaccaggggcta
gatttggggctggggctgggctggctagaggttggcctggtggagcaggctgactgtttc
ggggaggatgttcgcaatgatgatgccataggcagccccatggcgctctcatggggcctg
ccaagcccattcttcccagattctagaaatccagaccccactccctccgtcacacagcag
cacctacacatgcaggcagtctgcaggcaccccgaggaccagagcctcccgttgttagcc
aaaccaaccaacttgccacttcctttgaccccagagtctccaaatgaccacaagggatcc
ccgtttgagaacaaaaccattgaacgcacattgagtgtggagatctctggaaccccaggt
ttgacaccacctaccacgcccccccacaaagtcagtcaagagaaccctttcaaagcatcg
atcaaaaccaagttgtcttcatgctccccatctgccctggcgtgcaagagggctcggctg
agcgaggcgaaaccctgcaggcccctagccccaacctcggccccaggcaggaagggccca
gagcagactgagctgtacgcccagctaagcaaagcgtccactgccctccccacctctgtg
gttgctgcgacgacagggggctgcaaggaggagcgctgctgcggcaacaacaagcggagt
gtccagcctcgctgctacggtgaccatgactattgtcagtccacggcgaccagcacaaaa
caggaccctgccgccggcgctaacactaatgcggctaacgctaccgctaccatgacgact
actacgacaacccctctgaaacccaatccgggtgtggcggaggacaggcatgtggaatgt
aaggactcagccatgccaccctccccctcctcttcaacctctacatctcctcctccatct
tcatcctctttggccaagcagctgcagcagcagcagagctcttcccctgtgggtaaggag
gctcgggggcaggaccggacccccatcacccaggacaaaccacacccaccacagacccca
gaaggggaccagcactctgccagcaggaagcagcccctgcgagaccaggatatccgggcg
gagctcaacaagcactttggccgcccccagcaagccatctatagccagggtgagaagggg
gaggaggtggtggtggaggaggggagacggggaggaggggagatggccggagccctgcag
acccccaaagagagccctgctggatacgagaactaccccaagctctctagttctgggtct
ggttctactgggtacctgcacccgggcctctctcccttccacgaggagctggagggtcaa
ggtgtcgaggggcacttcctctacccctgggagggcatccctttggacctgcttttcgag
tcctgctcgccgtcctgctcgctgtccagctgctccccctcacggggctccgtctcgccc
ccctcctccctcctcctctcccccagacacttccactggccccactcgggctccccctcc
tcccgctctcactcccggtcccggtcccgcagttcctcctcccaccaccggaggcgctcc
ctctccagctcacctgacggacgcccctcctccaggtctcgccacaacatggactccagc
actttgcggtccaggacccacaaaagccctcactcacagtccagatcccccctcagtcgc
aggccacggtacgacagctacgaggaataccagcacgagtgtctgaagcgggaggagtat
cgccaggactaccagaagagggagtttgagagggctgagcagagggagaggcaaagggaa
aaagcaatagaggagagacgggtggtgtacgtggggagactgaggtccgacagcacgcgg
accgagctgaagcggcgctttgaagtcttcggcgagatcgaagagtgtgccgtgaacctg
agagatgacggggacaattttggcttcatcacctaccgctacacttgtgacgccgtcgct
gcccttgaaaacggacacaccttgcgccggtcaaacgagccccagttcgagctgtgcttc
ggtggacaaaagcagttctgcaaatcgaattatacagacttggactcccattctgacgac
tttgatccagcctccactaaaagcaagtacgactccatggatttcgacagcttgctgaaa
gaggcccagtgcagcctgagaaggtaa
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