Oncorhynchus tshawytscha (Chinook salmon): 112214745
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Entry
112214745 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112214745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112214745
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112214745
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112214745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
PHD_NSD
zf_RING_Vps8
zf-ANAPC11
zf-UDP
zf-RING_Vps41
PHD
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
112214745
NCBI-ProteinID:
XP_042154326
LinkDB
All DBs
Position
LG15:26604488..26621031
Genome browser
AA seq
727 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVIRNDPRGGSVVLGQVDTRLSPYIVDLH
SMHQFRQDTGTLRPVRRSFYDPTSAPGQGWLWEWENDTGSWTAYDTEVGIAIQAARDRQQ
PWLDLAPLGFCYLIHFQSMTQINGQTQRCRRIQRRSDLAYPLVSGPLPKSHHAWGPGPGG
LLGVSGVGMGVGLSGMGNGNGSAYPSGALPASAITSLGQPCACQQCMLLLSVKAGAMATA
HTLGRRPPQNKPPSPKLGGGYSAMGGSYSLTLPRPPSSMGRSLPPHRTSVGGASGGLGVG
GGGGFAHSLSLLGSATAALSLSSTRPPPPPLPPLPPPPPPPPSSTSSAPLSMPAPPPPLI
STSASSCTPSPSARVLGPVSSAAAACAAPLPPRASLAGLSRPALQRIAMAQSRALIASGV
PTVPVKNLNGSSPVHPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPVPGLG
HCCRKTTKKQARKGKTPEEVVKRYLQKVRSPPEEDCTICMEALPGPSGYKGPGVGGIQRA
ESVGRLAQCGHQYHLQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHS
LPGHPDCKTIRIIYNIPPGIQGPEHPNPGKPFTARGFPRHCYLPDSEKGRKVLRLLLVAW
DRRLIFSVGTSSTTGESDTVIWNEVHHKTEFGSNLTGHGYPDPGHLDNVLEELKAQGITE
EECLPRD
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgttactagcgtcggccgtggtggtatgggaatggctgaacgagcacgggcgctggcgg
ccttacagcccagcggtctctcaccacatcgaggcagtcatccgcaacgacccacggggt
ggtagtgttgtcttaggccaggtggacactcgcctctcgccctacatcgtcgacttgcat
tccatgcaccagttccgacaagatactggtaccctcagaccggttcgccgcagcttctac
gaccccacgtcggcgccgggtcagggctggctgtgggagtgggagaacgacacaggctcg
tggacagcctacgacacagaggtgggcatcgccatccaggcggcacgcgaccgccagcag
ccctggctggacctggcgccactgggattctgctacctcatccacttccagagtatgacc
cagatcaacgggcagacgcaacgctgccgccgcatccagcgccgctctgacctggcttac
ccacttgtttcgggtccccttcccaagtcacaccacgcctgggggcccggccctggggga
ctgttgggggtgtccggagtaggcatgggggtggggttgagcgggatggggaacgggaac
ggtagcgcctaccccagcggcgccctgccagcctccgcaatcacctccctgggccagccc
tgcgcctgtcagcaatgcatgctgctcctaagcgtcaaggcgggcgccatggcaacagcc
cacaccctgggcaggaggccaccccagaacaagcctcccagccccaaactgggtgggggt
tactcagccatgggggggtcctactcgctcaccctcccacgtcccccctcctccatgggc
aggtcccttcctccccacagaacgtctgtgggcggagctagcggtggcttgggggtcgga
gggggcggtggctttgcccactcactctccctcctgggttcggccactgctgccctgtcc
ctctcctccacccggccccctcccccgcctctacccccccttccgcctcctccgcctcct
ccgccctcctccacttcctctgcccctctgtcgatgcccgcgcccccccctcctctcatc
tccacatcagcttcctcctgcaccccctcgccctctgcccgcgtcctggggccggtgtct
tcagcggcggcggcctgtgccgcccccctacctccccgtgccagcctggctgggctgagc
cgacccgccctgcagcgcatcgccatggcccagtccagagcccttatcgcctccggagtc
ccaacggttcctgtgaagaacctcaatggatccagccctgttcaccctgcattggcaggt
attacagggatcctgatgagcgccgcaggacttcctgtctgtctgacccgtccccccaag
ctggtgctccacccccctcctgtcagcaagagtgacatcaagcccgttcctggcctcggc
cactgctgccgcaagaccaccaagaagcaggctcgcaaaggcaagacccctgaggaagta
gtgaagaggtaccttcagaaggtacgcagtcccccagaggaggactgcactatctgcatg
gaggccctgcctgggccctcgggctacaaaggccccggtgttgggggcatccagcgggca
gagtcggtgggtcgcctggcccagtgtgggcaccagtaccacctacagtgtctggtggcc
atgtacaacaatggcaacaaggatggcagccttcagtgccccacctgcaagaccatctac
ggcgtgaagacgggcaaccagccgcctggcaagatggagtatcacgttatcccccattca
ctgcctggccaccccgactgcaagaccatccgcatcatctataacatcccgccaggcatc
cagggccctgagcacccgaacccaggcaagcccttcaccgcccggggattcccccgacac
tgctacctccctgacagcgagaagggacgcaaggtactgaggctgctgctggtggcgtgg
gaccggcggctcatcttctcagtgggcacatccagcaccacgggcgagtcggacacagtc
atctggaatgaggtgcaccacaagacggaattcggctccaacctgacgggacacggctac
cccgacccaggccacttggacaacgttctggaggagcttaaggcccaggggatcaccgag
gaggagtgcctacccagagactga
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