Oncorhynchus tshawytscha (Chinook salmon): 112214789
Help
Entry
112214789 CDS
T05605
Name
(RefSeq) splicing factor 1
KO
K13095
splicing factor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112214789
Spliceosome [BR:
otw03041
]
Complex A
Other components
Complex A specific factors
112214789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH_1
zf-CCHC
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
112214789
NCBI-ProteinID:
XP_024229568
LinkDB
All DBs
Position
LG15:complement(29125587..29137930)
Genome browser
AA seq
679 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDAGPGAGLMPPPGPPVAFPSIPNFQPPIPNVSFPQAH
PVFTAVAAFPTPPQPPQGAGMQPQSDFGQKKARKRSRWNSETPDQKTVIPGMPTVIPPGL
TRDQEKAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKK
IEEERHSLITDMVALNPEFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGNTL
KNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRT
ILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSVTNTTLCTKCGG
AGHISSDCKFTSSFAAPRAGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHSNNQN
SGHNRGSNNQPPPSRPPWMNSGQSENRNFHSMHGGHGGHGNQHGGHGNQHGGHGGHHNFP
PPMSNMGGHPMPPNNGMPPPWMQPPPPPMGQGHGHHMGLLPPPMMPPPPPPPNNQPPPPP
SGPLPPWQQQAPPPPPTSSMATSAPLPWQQNTTTTSSPGTGNLPPWQQPQQSAASAAQPP
PPWATPPWSPSARSPAPSPPGAPTSPSSPTPGSAGMMYAPPPPPPPMDPSNFVTMMGMGV
PGMPPFGMPPAPPPPPPQN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggagcgaatgcaacccctctagggaagctgcacccgagtatcggcgctaaa
cgaggttttgatgctgggcctggtgcggggttaatgcctccacccgggcctcctgtggcc
tttccttcgataccgaattttcagccaccaattcccaacgtgtctttcccgcaagctcac
ccggtgtttactgcggtggctgcttttcccacaccaccacaaccaccccaaggtgccgga
atgcagccccagtcagacttcggtcagaaaaaagccaggaaaaggagccgctggaatagt
gaaacacccgaccagaagacagtcattcctggtatgcccaccgtcatcccgcctggactg
actcgggatcaggagaaggcctatatagtccaactgcagattgaagacctgactcgtaaa
ctgcgtacaggagacctgggaatccctgttaaccctgaggacagatccccgtctccagag
cccatctataacagcgagggcaagaggctgaacaccagggagtaccgcacacgcaagaag
atcgaggaggagcgtcattccctcatcaccgacatggtggcactcaaccctgagttcaag
ccccccgctgactacaagcccccagctaccagagtcaacgacaaggtgatgattccacag
gacgagtacccagagatcaactttgttggcctgctgattggaccacgtggcaacaccctg
aagaacatagagaaggagtgctgtgccaagatcatgatccgtggtaagggctcggtaaag
gagggcaaggtgggccgtaaggatggccaaatgctgccaggggaggacgagccgctgcac
gccctggtcaccgccaacaccatggagaacgtcaagaaggctgtggaacagatccgcacc
atcctgaagcagggcatcgagacccctgaggaccagaacgacttgaggaagatgcagctg
agagagctggccagactcaacggaaccctgagagaggacgacaacaggatcctacgtccg
tggcagagcactgaaccccgcagcgtcaccaacaccaccctttgtaccaagtgtggcggt
gcaggccacatctcctcagactgcaagttcaccagctcctttgctgcgcccagggccggt
gagcccccccagtcagcccaggacaaggcccgtatggacaaggaatacctgtccctcatg
gcggagctgggcgaggcccctgtaccctcctctggtgggggacactccaacaatcagaac
agcggccacaacagaggcagcaacaaccagccaccgccgagccgtcctccctggatgaac
tctggccagtctgagaacaggaacttccacagcatgcacggaggccacggtggtcatggc
aaccaacacggtggtcatggcaaccaacacggtggtcacggaggccaccacaacttccca
ccccccatgtccaacatgggaggacaccccatgccccccaacaacggtatgccacccccg
tggatgcagcccccaccgccccccatgggccagggacacggacaccatatgggtctgttg
cctccacccatgatgccaccaccaccaccacccccaaacaaccagcctccccctccaccc
tcgggtcccctgcctccatggcaacagcaggcccctccgccccctcccaccagcagcatg
gccactagtgcaccactgccatggcaacagaatacgaccacaacgtccagtcctggcact
ggcaacctgcccccctggcagcagccccaacagtccgctgcctcggctgcccagccccct
cccccatgggcaacccctccatggtccccctccgcccggagtccagccccctctcccccc
ggcgcccccacctccccctcctcccccacccccggctcggccggcatgatgtatgcccct
ccacctccccctccgcccatggatccctccaactttgtcaccatgatggggatgggggtg
ccaggaatgccccccttcggtatgccccctgcgcctccaccgccacccccccaaaattaa
DBGET
integrated database retrieval system
