Oncorhynchus tshawytscha (Chinook salmon): 112214795
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Entry
112214795 CDS
T05605
Name
(RefSeq) reticulon-3 isoform X1
KO
K20723
reticulon-3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112214795
03036 Chromosome and associated proteins [BR:
otw03036
]
112214795
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112214795
Autophagy
ER-phagy
ER-phagy recepters
112214795
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112214795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
Babuvirus_MP
DUF639
Motif
Other DBs
NCBI-GeneID:
112214795
NCBI-ProteinID:
XP_024229585
LinkDB
All DBs
Position
LG15:29213014..29249131
Genome browser
AA seq
1027 aa
AA seq
DB search
MADTDKGVVLGTDTPSSEGVATSLRFTRPSQLGSSSFANYGSDPSSGQPDGTQDDSPTVT
SPVSERIKALEALAAKKEPNNDGGFPHFKERHYETSPTAAPTEGTSPFQTKGASIDQESP
ESPFEVMGEARQGSEFEDTADWMRAHLPPVPDFEDALVSEEDGKSQEIKVADKVVPDDPE
AFACVPDAFMDSPIERPELKNVFKDPAQQPSVEDEFDLSFLPKAYITDTQGPPDLHSELT
ASPAPPAGLDSPSPSSDSKEKDLKTKQAPWGGDLALQGVVDSSGDSEDTVIEDTASIPGP
SLSSDATPAHNPSVPSLPTEEKETPPAKQPMRVPTINVIETDEPNCSDEEMEIEIEDENY
EVVEDPVKEAPKIPEPQPDVPKKEFSQIPPLEYEGYSPPSSPVDSDEYSPKHKILKSDLD
TDNMKTTVPNDESKGSSAEVSQAQKVESDHSQTPNESNGKSSPSTAKPPEKTAENLSDFP
EYDDDDWSTGAQDILIKLSSANVAAQDPPLCPSSKFEEKPESDIKEDYMQTVELSKPNYM
EDDAIRKYDRQSFEDEDALPSMNDTIDDKELNFNTVPEPSPSNPTSQIHIGTLLPQNNAT
TVEQDIPLMADVDSFPKPVGGQPSPREFPKDPFASFQSELPGSTLEPKTEKKLNDEILIT
DSVVNSKTLPPQEAEAGHQSPDNTSDPESIEPDCSVSGATDSFVEFMRECLKSRQDEDPE
DLRQDLTAKDECPKTGAPPSQPTPTMVMDLEQERLTINALKELGSSQEEEADLQSSIKAS
EKFESSFISTTSDPPSPQNKPASDGVYSNEVEAIDVWVAEAYHLAEHVLAAILTHLSVKD
LVHWRDPKKSGVVFGLSLLTLLSLAAFSVISVVSYLLLALLCVTISFRIYKAVVQAVQKS
DDGHPFKALMEKDVSVPPETFRKHVDASLTHINRLLKQLRKLFLVEDLIDSLKLAVVMWL
LTYVGAVFNGITILILADILLFAIPPFYEKNKTQIDHYMEIARTQVNTTMAKLQEKLPGA
IKRTKAE
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacagacaaaggggtggtgctgggcactgacacaccctcctcagaaggggtg
gccacctcccttcgcttcaccaggccttctcaactcggctcatcttctttcgcaaactac
gggagcgacccatcatcaggtcagcctgacggaacgcaagatgattcaccgactgtgacg
tcccccgtgtctgagaggattaaggcactggaggccctggcagcaaagaaggagcccaat
aacgacggcggcttccctcacttcaaagagcgtcactatgagacgtctcctactgcggcg
ccaacagagggcacctcacccttccagacaaaaggcgcctccattgatcaggaatcgcca
gaatccccctttgaggtcatgggagaagcccgacaagggagtgagtttgaagatactgca
gactggatgagagctcacttaccccctgtgcctgactttgaagatgctcttgtatcagag
gaggatggcaaatcccaagagataaaagtggcagataaagtggtgcctgatgacccagag
gcatttgcctgtgtccctgacgctttcatggactctcccattgaaaggcctgaactgaaa
aatgtattcaaagacccagcgcagcagcctagcgtcgaggatgaatttgatctgagcttc
ctacctaaagcttacataacagacacccaaggcccccctgaccttcattccgagctcact
gcttcgcctgctcctcctgctggtttggactctccctctccctcctctgactcgaaagag
aaggatttgaagaccaagcaggccccatggggtggtgacctggcgctccaaggggtggtc
gacagctcaggagactctgaggacaccgtcatcgaggacaccgcctccattcctggcccc
tctttgtcaagtgatgccacacctgcccataacccctctgttccatctctccctactgaa
gaaaaggaaaccccaccagcaaagcagccaatgcgggtccctaccatcaatgttattgag
acggacgagccgaattgcagcgatgaggagatggagattgaaatagaggatgaaaattat
gaagttgtagaagaccctgtgaaagaggcaccaaaaatacctgagccacaaccagatgtg
cctaaaaaggaattttcccaaattcctcccttagaatatgagggttattctcctccctcc
tctcctgtcgactctgatgaatactcacctaaacacaagatcctgaaatctgatttggat
acagataatatgaagaccacagtacctaatgatgagtcaaagggctcaagtgctgaggtt
tcacaagcacagaaagtggagtctgaccactcacagacccccaatgagtctaatggaaag
tcttccccttctactgccaaacctcctgagaaaaccgcagagaacctttcagactttcca
gaatatgatgacgatgactggtcaactggcgcgcaagatatcttaattaaattgagctct
gctaatgttgcagctcaggatcctccactttgcccctcatccaagtttgaagagaagcca
gagtctgatattaaagaggattatatgcagacagttgagctttcaaaacccaactacatg
gaggatgacgcaatccgtaaatacgacagacagtcctttgaagatgaagacgcacttcca
tccatgaatgacaccattgatgataaagagctgaactttaacactgtacctgagccttct
ccttccaatccaacctcacagatccatattggaacactactccctcaaaacaatgcaacc
actgtggagcaggatatccccttgatggctgacgtggactccttccccaagccagttgga
ggccagccatctcccagggagtttcccaaagatccatttgcctctttccagagcgaactg
cctggcagcaccctggagcccaagactgagaagaaattgaatgatgaaatcctcattaca
gatagtgttgtcaacagcaagacacttccgcctcaggaagctgaagcaggacaccagtca
ccagacaataccagtgacccagaaagcattgagccggactgctcagtctctggtgccacg
gacagcttcgtcgagttcatgagggagtgcctgaagtcacgacaggacgaagatccagaa
gacctccgtcaagatctcacagccaaggatgagtgtcctaaaacaggtgcccctccctcc
cagcccacaccaaccatggtcatggatctggagcaggaacgcctcactatcaatgccctc
aaagagttgggcagcagccaggaagaggaggctgacctccagtctagtatcaaggcttct
gagaaattcgagtcttcctttatatcaacaacctccgaccctccttctccccaaaacaaa
cctgcttccgacggtgtatattccaacgaggtagaggccatcgacgtgtgggtggctgag
gcctaccaccttgcagagcatgtcttggcagcaatactaacgcacttgtcagtcaaggac
ttggtgcactggcgagaccccaagaagtctggcgtggtgttcggcctgtccctgctgacg
ctcctgtccctggcggcgttcagcgtcatcagcgttgtctcctacctgctccttgccctg
ctctgtgtcaccatctccttccgaatctacaaggctgtcgttcaggccgtgcagaagtcc
gatgacggacaccccttcaaagctctgatggagaaggatgtcagcgttccccctgagacc
ttccgcaagcacgtggacgccagtctgacccacatcaaccgactcctaaaacagctgcgc
aaactcttcctagtcgaggacctcatcgactccctgaagctggctgttgtgatgtggctg
ctgacctacgtaggagctgttttcaacggcatcaccatcctcatcctggctgacatcctc
ctctttgccataccccccttctatgagaagaacaagacccagattgatcactacatggaa
atcgcacgtactcaagtcaacaccacaatggccaagctgcaagagaaactccctggagcc
atcaagcgtacgaaagctgaatga
DBGET
integrated database retrieval system
