Oncorhynchus tshawytscha (Chinook salmon): 112214799
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Entry
112214799 CDS
T05605
Name
(RefSeq) metastasis-associated protein MTA2-like
KO
K11660
metastasis-associated protein MTA
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112214799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112214799
03036 Chromosome and associated proteins [BR:
otw03036
]
112214799
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
112214799
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
112214799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTA_R1
ELM2
BAH
GATA
Myb_DNA-binding
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
112214799
NCBI-ProteinID:
XP_042153746
LinkDB
All DBs
Position
LG15:29318447..29347596
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AA seq
671 aa
AA seq
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MKLGTEDGRKSGISDRLAIKGCCLLGVTREWRPTCTEWETANGNVEAKVVCLFRRRDISG
NLNTLADSNARDFEEESKQPTVSEQQKHQLKHRELFLSRQFESLPATHIRGKCNVTLLNE
TDVLAGYLEKEECFFYSLVFDPVQKTLLADQGEIRVGSKYQAEIPDKLAEGEEDTRIQEK
LEVKVWHPDNQLKDPQIDQFLVVARAVGTFARALDCSSSIRQPSLHMSAAAASRDITLFH
AMDTLQKNDYDLAKAMSTLVPQGGPVLCRDEMEEWSASEAMLFEEALEKYGKDFNDIRQD
FLPWKSLASVVQFYYMWKTTDRYIQQKRLKAAEADSKLKQVYIPTYTKPNPNQIMAPGNK
PGMNGAAGFQKGLSCESCRTAQSAQWYAWGPPNMQCRLCASCWIYWKKYGGLKTPTQLEG
AARSGSESTPRGHMTRQEVQGLSPFTTSGGRAKLLAKNRQTFILQTTKLTRIARRVCTDI
LQPRSAARRPYASINANAVKAECMIRLPKATKAPIKNCSIPRPPLATIVKELAIQAPLKL
KAPRGTPTPINRNQANQPRGGSALLGKRPFDSSALALPFPTNGRPFTSGMRTTSQSVIKR
QKVNQGDAPNPVVFVATKYTRALRKHLTQSEMRRAARKPHLPVRVKLPLPPRPLALAILP
SSTSEPIVLED
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgggaacggaggatgggaggaagagtggaataagcgacaggctagctatcaag
ggctgttgtttgttgggggtaacgagagaatggcggccaacatgtaccgagtgggagacg
gccaatgggaacgtggaagccaaggtggtgtgtctgtttcggaggagggacatctcgggc
aacctcaacactctggccgacagcaacgcaagagactttgaggaggagtccaagcagccc
acagtgtctgaacagcagaaacaccagctgaaacacagagaactcttcctctctcggcag
tttgagtctttaccagccactcacataagggggaaatgtaacgttaccctcctcaacgaa
acagacgtcctcgccggctacctggagaaagaggagtgtttcttctactcgctggtgttt
gacccggtccagaagaccctgctggcggaccaaggagagattcgggtgggctccaagtac
caggccgagatccccgacaagttagccgaaggtgaagaagacacccgtattcaggagaag
ctggaggtcaaggtgtggcaccccgacaaccagctcaaagacccacagatcgaccagttt
ctggtggtggctcgtgctgtggggacgtttgcccgagccctggactgcagcagctctatc
cgtcaacccagcctgcatatgagtgctgcggccgcctcccgagacatcacgctgttccat
gcgatggataccctgcagaagaacgactacgacctggccaaggccatgtccacactggtg
cctcagggcgggcccgtgctctgccgtgacgagatggaggagtggagtgcctcggaggcc
atgctgttcgaagaggccctggagaaatatggcaaggacttcaacgacatccgccaggac
tttttaccatggaagtcacttgccagcgtggttcagttctactacatgtggaaaaccacc
gaccgctacattcaacagaaacgactcaaggcagcggaagcagacagcaagctgaagcag
gtttacatccccacctacaccaagcccaaccccaaccagatcatggctcctggtaacaag
cctggcatgaacggggccgctggcttccagaaaggactgagctgtgagagctgccgtacc
gcccagtcagcacagtggtacgcgtggggtcctcccaacatgcagtgcagactgtgtgca
tcctgctggatatactggaagaagtacggaggcctgaagacccccacacagctagagggg
gccgcaagatctggctcagagtcaaccccccgaggtcacatgacccgccaggaagtgcag
ggcctgtcaccgttcacgactagtggggggcgggccaagctgctggccaaaaaccggcag
acgttcatcctgcagaccaccaagctgacgcgcatcgcccgccgtgtctgcactgacatc
ctgcagccccgcagcgctgcacgccgcccctacgcctccatcaacgccaatgccgtcaag
gccgagtgtatgataaggctgcctaaagcgaccaaggcccctataaagaactgctcgatc
cctcggccaccgctggccaccatagtgaaggaactggccatccaggctccactcaagctg
aaggcccccagaggcacccccacccccatcaaccgcaaccaggccaaccagccccgtggg
ggatcggccctgcttgggaagaggccctttgatagcagcgcgttggcactgccgttcccc
accaatgggaggccattcacatcaggcatgaggaccacctctcagtcagtgatcaagcgt
cagaaagtgaaccaaggagacgcgccaaaccctgtggtttttgttgctactaaatacacc
agggctctgaggaaacacctgacccagtctgagatgcgacgggcagccaggaaaccacac
ctccccgtcagggtcaagctgcccttgcctccccggcccctggctttagccattctgccc
tccagcaccagcgagcccatcgtcctggaggactaa
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