Oncorhynchus tshawytscha (Chinook salmon): 112214860
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Entry
112214860 CDS
T05605
Name
(RefSeq) alpha-actinin-3
KO
K21073
actinin alpha 2/3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112214860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112214860
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112214860
04147 Exosome [BR:
otw04147
]
112214860
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112214860
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112214860
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112214860
Exosomal proteins of colorectal cancer cells
112214860
Exosomal proteins of bladder cancer cells
112214860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAMSAP_CH
AIF-1
Dynamin_M
XisI
Motif
Other DBs
NCBI-GeneID:
112214860
NCBI-ProteinID:
XP_042183060
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All DBs
Position
LG09:complement(58919497..58952160)
Genome browser
AA seq
882 aa
AA seq
DB search
MMAVEPQAQYNTSYMMSEEHQYMSPEDEWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGT
QIENIEDDFRNGLKLMLLLEVISGERLPKPDKGKMRFHKIANVNKALDFICSKGVKLVSI
GAEEIVDGNTKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYRNVNVQNFH
ISWKDGLALCALIHRHRPDLIDYSKLRKDDPIGNLNTAFEVAEKYLDIPKMLDAEDIVNT
PKPDEKAIMTYVSCFYHAFAGAEQAETAANRICKVLAVNQENEKLMEEYEKLASELLEWI
RKTIPWLENRMAEQQMKAMQQKLEDFRDYRRIHKPPRVQEKCQLEINFNTLQTKLRLSNR
PAFMPSEGKMVSDIANAWKGLEQVEKGYEEWLLTEIRRLERLDHLAEKFKQKCSLHQSWT
SGKEELLSMKDYESASLMEIRALMRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAS
SVNARCQGICDQWDNLGTLTQKRRDSLERVEKLWETIDQLYLEFAKRAAPFNNWMDGAME
DLQDMFIVHSTEEIHSLITAHDQFKATLPEADKERMATMGIQSEIVKIAQTYGIKLSGVN
PYTNLSPQDITNKWEAVKHLVPLRDQMLQEEVARQQANERLRRQFAAQANIIGPWIQTKM
EEIGHVSVDIAGSLEEQMNNLKQYEQNIINYKCNIDKLEGDHQLSQESLIFDNKHTNYTM
EHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQLNEFRASFNHFDRKRNGMMDPDD
FRACLISMGYDLGEVEFARIMTLVDSNNTGVVTFQAFIDFMTRETAETDTADQVMASFKI
LASDKAYITVDELRRELPAEQAEYCISRMTRYIGADGPAGAL
NT seq
2648 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgtcgaaccccaagcgcaatataacacctcgtatatgatgagcgaggagcat
cagtatatgtctccggaggatgagtgggacagggacctactgctggaccccgcctgggag
aaacagcagagaaagacgttcacagcttggtgtaactcccacttgaggaaggcagggaca
cagatcgagaacatcgaggacgacttcaggaatggcctcaaactcatgctgctgctggag
gtcatctcaggtgagagactgcccaaacccgacaaaggcaagatgcgtttccacaagatt
gcaaatgtgaacaaggccctggacttcatctgcagcaagggagtcaagctggtgtccatc
ggcgctgaggagatcgtcgacggtaatacgaagatgaccctgggaatgatctggaccatc
atcctgcgtttcgccattcaggacatctccgtggaggagacctctgctaaggagggtctt
cttctgtggtgccagaggaagactgccccctacaggaacgttaacgtgcagaacttccac
atcagttggaaggatggcctggcactgtgtgccctcatccacagacacagacctgacctc
attgactactccaaactgagaaaggatgaccccatcggtaacctcaacactgccttcgag
gtggctgagaagtacctggacatccccaagatgctcgacgctgaagacattgtgaacacc
cccaagcctgatgagaaggccatcatgacctacgtgtcctgcttctaccacgccttcgct
ggcgccgagcaggctgagacagcagctaacaggatctgtaaagtgctggctgtgaaccag
gagaatgagaaactcatggaggagtatgagaagctggccagtgagttgctagagtggatc
cgcaagaccatcccgtggctggagaaccgcatggcggagcagcagatgaaggccatgcag
cagaagctggaggacttcagggactaccgccgcatccacaagcctccccgcgtccaggag
aagtgtcagctggagatcaacttcaacaccctgcaaaccaagctgaggctgagcaaccgg
cccgccttcatgccctctgagggaaagatggtctcggacatagccaatgcatggaagggt
ctggagcaggtggagaagggatacgaggagtggcttcttactgagatcagacgtctggag
agactggaccacctggctgagaagttcaagcagaagtgttccctgcaccagtcctggacc
tcaggtaaagaagagctgctgtccatgaaggactatgagtcggcctctctgatggagatc
agggctctgatgaggaaacacgaggcctttgagtctgacctggccgctcaccaggaccga
gtggagcagatcgccgctatcgcccaggagctcaatgagctggactaccatgacgcgtcc
tctgtgaacgcccgctgccagggcatctgtgaccagtgggacaacctgggtacgctgacc
cagaagaggagggactccctggagcgcgtggagaaactgtgggagaccattgaccagctg
tacctggagttcgccaagagggcggcgcccttcaacaactggatggacggagccatggag
gatctgcaggacatgtttatcgtccacagcaccgaggagatccattctctgattacagcc
catgaccaattcaaggccaccctaccagaggctgataaggaacgcatggccaccatgggc
atccagagcgagattgtgaagatcgctcagacttacggcatcaagctgtcaggagtcaac
ccctacaccaacctctccccccaggatatcactaacaagtgggaggcggtgaagcacctt
gttcctctcagggaccagatgctgcaggaggaggtggccaggcagcaggctaacgagagg
ctgaggcgccagttcgctgcccaggccaacatcatcggaccctggatccagaccaagatg
gaggagattggtcatgtgtctgtggacatcgccggttctctagaggaacagatgaacaat
ctcaagcagtatgaacaaaacattatcaactacaagtgtaacatcgacaaactggaggga
gaccaccagctcagccaggagtccctcatctttgacaacaaacacaccaactacaccatg
gagcatatccgtgtgggctgggagcagctgctgaccaccatcgcccgcaccatcaacgag
gtggagaaccagattctgacccgcgatgccaagggtatcagccaggagcagctcaacgag
ttccgagcctccttcaatcacttcgacaggaagagaaacggcatgatggaccccgacgac
ttccgtgcctgtctcatctccatgggttacgatctgggtgaggtggagtttgcccgcatc
atgaccttggtggattcaaacaacacaggcgtggtcaccttccaggccttcatcgacttc
atgacccgtgagacggccgagacagacaccgctgaccaggtcatggcttcctttaagatc
ctggcctccgacaaggcctacatcacggttgatgagctgcgcagagagctgcccgcagag
caggctgagtactgcatcagccgcatgaccaggtacattggagctgacggcccagccgga
gccctcga
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integrated database retrieval system
