Oncorhynchus tshawytscha (Chinook salmon): 112214891
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Entry
112214891 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: neurexin-2-like
KO
K07377
neurexin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112214891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112214891
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
112214891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
112214891
NCBI-ProteinID:
XP_042154336
LinkDB
All DBs
Position
LG15:complement(27597459..28722565)
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AA seq
1648 aa
AA seq
DB search
MTSGLRFSALPMGPLVFLSLLVTARALEFGGAPGQWARYGRWEAGSLGELSFSLKTNISK
ALLLYLDDGGNCDFMELLIAGGRLQLRFAIHCAEPATLHMETQVNDDRWHMVLLTRNFRE
TLLMVDGETKMSEVKSKRKEMAVVSDLFVGGIPPDVRLSALTSSTVKYEPPFLGLISNLK
VGETPPTLLNSQGIQSDMEYLCTKQNPCLNGGFCSIQYGEVHCDCTHTRYKGKYCKEAEE
YAVEGLAHLTLNNQGDSSQAGKEVSVATFKGNEFFCYDLSLTPIQSSTDEITLSFRTLQR
NGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLR
QHAGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGC
LKDVVYKNNDFKLELSRLAIERDPKISLNGDLVFRCEDVAALDPVTFESPESFIALPKWN
TKKTGSISFDFRTTEPSGLLLFSHGRTQGPKEQKPGRDMKSDYFAMELLDGFLYLLMDMG
SGSIKLKTSNKKVNDGEWCHVDFQREGRKGSISVNSRSIPFNSNEGSEILDLDSDMFLGG
LPETRSDLVLPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLAEIQSSPGVSSFCTRELQ
KRCSSTPCGNGGLCKEGWNRYICDCTGTGYLGSNCEIEATVLSYDSSMYLKILIPGTMHT
EAEDVALRFMSQRAYGLLMATTSKESADTLRLELDGGRVKLTVNLDCIRIDCNLSKGPET
VFAGQKLNDNEWHTVKVVRRGKNLQLSVDNVTVEGQMTGAHTRLEFHNIETGIMTERRFI
SVVPSNFIGHLQGLTVNGVPYLDQCKNGDISYCELNARFGMRHIIADPVTFRTKASYLAL
ATLQAYASMHLFFQFKTTTSDGLLLFNSGDGSDFIVVELVKGYVHYVFDLGNGPSLMKGN
SDKPLNDNQWHNVVVSRDANNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVGKSMYNT
LPKLIASRDGYQGCLASVDLNGKLPDLIADALHRMGQVERGCDGPSTTCTEDSCYNQGVC
LQQWEGFSCDCTMTSYGGSFCSDPGTTYIFGRGGALITYTWPPNDRPSTRADRLAVGFST
QLKEAVLLRVESAKGLGDYLELHIEQGRIGVIFNVGTDDIVIEESAVMVSDGKYHVVRFT
RSGGNATLQVDSQPVIERFPSGRQLTIFNSQAFIKIGGGGGDKARHFQGQISGLYYNGLQ
VLKLAAEGDPNVQAQGNLRLVGDVPSVLTTDTTSTTPLADMSTTIMETTTTMATTTTRKQ
RSPTMRDSVTQNTDDILVASAECPSDDEDLEECEPGNGGELVLPIITVDSLDPPYATRYP
VIPPPPTYRPFLETTKESLPLPNXAAPCPLDQEDCEEAGPIEVSAYGSGEMTESDDEDYY
KNSPSSPIGRSSPSPNEGSVQNPATATSPTGPQLPPPPLSSTPTANPDQLGPRLNKPGGS
SSNIPAGKMNTRDQVLLPPTHPSSDPDRHRHAPGVTYPPNFPHVPTPDPTSPERGGPPGA
VEVIRESTSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQVDQSRNYISNSATQSN
GTLVKEKQPGTAKTTIKNKKNKDKEYYV
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcggattgaggttttccgctttgcccatggggcccttggtgttcctcagtctg
ctggtgacggcccgggcgctggagttcggcggggcccccggccagtgggcccgctacggg
cgctgggaggcgggctcgctgggtgagctgagcttcagcctcaagaccaacatcagcaag
gctctgttgctctatctagatgacggcggcaactgtgacttcatggagctcctgatcgcc
ggagggcgcctccagctgcgctttgccatacactgtgccgagcccgccactttacacatg
gaaacccaggtcaacgacgaccgctggcacatggtgctcctcacccgcaacttccgcgag
actctgctgatggtggacggcgagaccaagatgtcggaggtcaagtccaagcggaaggag
atggcggtggtaagcgacctgttcgtgggcggcatcccgcccgacgtgcgcctctcagcc
ctcacctccagcacggtgaagtacgagcccccgttcctgggcctgatctccaacctgaag
gtgggagagacaccccccaccctgctcaacagccagggcatccagagtgacatggagtac
ctgtgcaccaagcagaacccctgcctcaacggaggtttctgctccatccagtatggcgag
gtacactgtgactgcacgcacactcgctacaaggggaagtactgcaaggaagcagaagag
tatgctgttgaaggtctggcgcacctgacgttaaacaaccaaggggactcatcgcaggcc
gggaaggaagtgtcggtggccacattcaaggggaacgagttcttctgctacgacctgtca
ctgacgcccatccagagcagcacggacgagatcacgctctcctttcgcacgctgcagcgc
aacggcctcatgctgcacacgggcaagtcggccgactacgtcaacctgtcgctgaagagc
ggcgccgtctggttggtcatcaacctgggctcgggcgccttcgaggcgctggtggagccc
gtcaatgggaagttcaatgacaacgcctggcacgatgttcgcgtcacccgcaacctgcgc
cagcacgcaggcattggacacgctatggtgaccatatcagtggatggtattttgaccact
actggttatacccaggaggactataccatgttgggatcagatgacttcttctacattggg
gggagtcccaatactgcggacctgcccggatcacctgtcagcaacaacttcatgggctgc
ctcaaagacgtggtatacaagaataacgacttcaagctagaactctcccggctggccatc
gagcgggaccctaagatcagcctgaacggagatcttgttttccgttgtgaggacgtggcc
gccctggaccccgtcacctttgagtccccagagtccttcatcgccctgcccaagtggaac
accaagaaaacaggctccatctccttcgacttccgcaccacagaacccagcgggctgctc
ctgtttagccacgggcgcacccagggtcctaaagagcagaaaccaggtcgtgacatgaag
tcagactacttcgccatggagctgttggatgggtttctctacctgctaatggacatggga
tctgggagtatcaagctgaagaccagtaataagaaggtgaacgacggggagtggtgccat
gtggacttccagagggaagggaggaaaggttccatctcagtgaacagccgcagtatcccc
ttcaactccaacgagggcagtgagatcctagacctggacagtgacatgttcctggggggt
ctcccagagacccgctctgacctggtgctgccccccgaggtctggaccgccctgctcaat
tacggctacgtgggctgcgtccgggacctcttcatcgacggcaagagccgcgacgtgcgc
cgcctggccgagatccagagctccccgggcgtcagcagcttctgcacccgcgagcttcag
aagaggtgtagcagcaccccctgtgggaacggaggcctgtgtaaagagggatggaaccgc
tacatctgcgactgcaccggcaccggctacctgggcagcaactgtgaaattgaggcgacg
gtgctgagctacgacagcagcatgtacctgaagatcctcatcccaggcaccatgcacacc
gaggcagaggacgtggcgctgcggttcatgtcccagagggcctacggcctcctcatggcc
accacctccaaagagtctgccgacaccctgcggctagagctggacggtggcagggtcaag
ctgaccgtcaacctagattgtatcaggatagactgtaacctcagtaaaggccccgaaacg
gtcttcgccggccaaaagctcaacgacaacgagtggcacacggtgaaagtggtacgcaga
ggaaagaacctccaactctctgtggacaatgtgacggtagaaggccaaatgacaggggcc
cacacccgtctggagttccacaacattgagacgggcatcatgacagagcgccgcttcatc
tccgtggtgccctccaacttcatcggtcacctccagggcctgacggtcaacggtgtgccc
tacctggaccagtgcaagaacggcgacatctcctactgtgaactcaacgctcgcttcggc
atgcgccacatcatcgccgatccggtgacgtttcgaacgaaagcgagctacctggcgttg
gctactttgcaggcctacgcctccatgcacctcttcttccagtttaagaccaccacgtcg
gatggcctgttgctcttcaactcgggggatggcagcgacttcatcgtcgtggagctggtc
aaaggttacgtccattacgtctttgacctcggcaacggaccgtcactgatgaagggcaac
tcggacaagccgctcaatgacaaccagtggcacaacgtggtggtctcccgggacgccaac
aacgtgcacacgctcaagatcgactcccgcaccgtcacccagcactccaatggagcccgc
aacctggatctcaaaggggagctgtacatcggtggcgtggggaagagcatgtacaacact
ctgcccaagctgatcgcgtcccgggacgggtaccagggctgcctggcctcagtggacctc
aacgggaaactaccagacctgatcgcagacgccctccacaggatgggccaggtggagcga
ggctgcgacggacctagcaccacctgtacggaggactcctgctacaatcagggggtgtgt
ctccagcagtgggagggcttctcctgcgactgcaccatgacgtcctatggaggctccttc
tgtagcgaccctgggacaacctacatcttcgggagaggaggagccctcatcacgtacacc
tggccccccaacgaccggccgagcacgcgggcagaccggctggcggtgggcttcagcacg
cagctcaaggaggccgtgctgctcagggtggagagtgccaagggactgggagactacctg
gagctgcacatagaacagggaaggatcggcgtcatcttcaacgtgggaacggatgacatt
gtcatcgaggagagcgcggtgatggtgagcgacggcaaataccacgtggtgcgcttcaca
cgcagcggtggcaacgctaccctgcaggtggacagccagcccgtcatcgaacgcttcccc
tcaggtcgacagttgaccatcttcaacagccaggcgttcatcaagatcggtggtggtggc
ggcgacaaggcccgtcacttccagggccagatctcgggcctctactacaacgggctgcag
gtgctcaagctggcggccgagggcgaccccaacgtgcaggcccagggcaacctgcgactg
gtgggcgacgtgccctcggtgctcaccacagacaccaccagcaccacgccgctggccgac
atgtccaccaccatcatggagacaaccaccacgatggctaccaccaccacccgcaagcag
cgctcacccaccatgagagacagtgtcacacagaacacggatgacatattggtagcgtct
gctgagtgtcccagcgatgacgaggacttggaggagtgtgagcctggaaatggaggtgaa
ttagtgttgcccattataactgtggactccctagaccccccctacgccacccgctacccc
gtaatccccccgccccccacctaccgccccttcctcgaaaccaccaaagaatccctcccc
ttgcccaacnnggccgccccctgcccactggatcaggaggactgcgaggaggcgggaccc
atcgaggtgtccgcctacggctcgggcgagatgaccgagtcggacgatgaggactattac
aaaaactccccctcgtcaccgataggacggtcctccccctcccccaacgagggcagcgtc
cagaaccccgcgaccgccacttctccaaccggcccccaactcccaccgccccccttgtcg
tccacccccacggccaaccctgaccagctaggccccaggctcaacaagccaggcggcagc
agcagcaacattcctgccggcaagatgaacacccgggatcaggtgctgctgccacccacc
cacccctcctccgaccctgaccgccaccgccatgccccaggcgtaacctaccctcccaat
ttcccccatgtgcccaccccagaccccacatccccggagagaggagggcctcccggcgcg
gtagaggtgatcagggagtccaccagcaccacgggcatggtggtgggcatcgtggcggcc
gccgccctctgcatcctcatcctgctctacgccatgtacaagtaccgtaacagggacgag
ggctcctaccaggtggaccagagccgtaactacatcagtaactcggccacgcagagcaac
ggcaccctggtgaaggagaagcagccaggcacagccaagacaaccatcaagaacaagaag
aacaaagacaaggagtactatgtctga
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