Oncorhynchus tshawytscha (Chinook salmon): 112215014
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Entry
112215014 CDS
T05605
Name
(RefSeq) neuroepithelial cell-transforming gene 1 protein-like isoform X1
KO
K20683
Rho guanine nucleotide exchange factor 3/8
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112215014
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112215014
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
PH_5
PH_13
Motif
Other DBs
NCBI-GeneID:
112215014
NCBI-ProteinID:
XP_042167221
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All DBs
Position
LG33:14946170..14978669
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AA seq
620 aa
AA seq
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MEETNEGQVQISIPEKQNDRPKRKANKKRKFSVDDETSGESNNNTKSRPGLRRGSSFTFL
TPGPQWDFSLKRKIREKDDSDAVSLCSFDFKEPSNKRVRPLGRVSSLANLISPVRNGAVR
RFGQTIQSMSFRGDGSGGKTPGVPQKPCSKAAAPTPPKRRNSMLWSETLDVHQKGTFSTK
EIKRQEAIFELTRGEQDLIEDLQLARKAYHDPMLKLSIMSEEELSHIFGDLDAYIPLHED
LLAQLATATGPDGTVGQIGQIVVSWLPGLNAYRDYCSNQVAAKALLDQKKQDRRVQDFLQ
RCLESPFSRKLDLWSFLDIPRSRLFKYPLLLKEILKHTAPEHPDTPHLELAITIIQDVLS
DINMKKGESESQYYIDKLEYLDDRQRDPRIDQCKSLLCHGELRNKSGTKLHVFLFTELLV
MTRPVTRNEHHCFQVYRQPIPVQDLVLEDLQDGDVKMGGSFRGAFSNSDKAKNIFRVRFH
DPSQGQSHTLQVNDVFHKQQWLNCLRSAISVHHPADVTTSASSPAADAHSKRRSSKISII
HTEEADENCPLTPAGATSASSLLCGDETPSPTSSSPSSSSPSSRSSSSSSSPLSSPSPKH
KTKKDKRSLSALGKRKETMV
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaccaatgaaggacaggtccaaatttcgataccagagaaacagaatgacaga
ccgaagagaaaggcaaacaagaagaggaagttctccgtcgatgatgagacgtccggcgag
agcaataacaataccaaatcaaggcctggactgagaagagggagctccttcaccttcctc
acccctggacctcaatgggacttcagtctgaagcggaagatcagagagaaggatgactct
gatgcagtcagcctgtgcagctttgacttcaaggaacccagcaacaagcgtgtccgtcct
ctcggcagggtgagctcgctggctaacctcatctcccccgtgaggaatggggccgtccgg
cgcttcggccagaccatccagtccatgtccttccggggcgatggcagtggtggcaagacg
ccgggcgtgccccagaagccatgcagtaaggcggcggcgcccacgccgcccaagagacgc
aacagcatgctgtggtcagagaccttagacgtccaccagaagggcaccttctccaccaag
gagatcaagagacaggaggccatatttgagttgactcgcggagaacaggacctgattgag
gacctccagctcgcacgcaaggcgtaccacgaccccatgctgaagctgagtatcatgtcg
gaggaggagctgagccatatcttcggggacctggatgcctacatccccctccacgaggac
ctgctggcccagctggccacagccaccggccccgacggcaccgtgggacagataggacaa
atcgtcgtcagctggttgccagggctgaatgcataccgagactactgcagtaaccaggtg
gcggccaaggccctgttggaccagaagaaacaggaccggagggtgcaggacttcctgcag
cgctgcctggagtctcccttcagcaggaagctggacctgtggagcttccttgacatcccc
cgctcccgcctgtttaaataccccctcctgctcaaggagatcctcaaacacacggcgccc
gagcaccctgacacgccccacctggagctagcgatcaccatcatccaggatgtgttgtct
gacatcaacatgaagaagggtgagtcagagagccagtactacatagacaagctggagtat
ctggatgacaggcaaagagacccgcgcatcgaccagtgcaagagtctgttgtgtcacggc
gagctacgcaacaagagcggaacaaagctgcatgtgttcctgttcacagagctgttggtg
atgacccggcctgtgacgcggaacgagcaccactgtttccaggtgtaccggcagccaatc
ccggtgcaggacctggtgctggaggacctgcaggatggagatgtcaaaatgggtggctcc
ttcagaggagcattcagtaactcagacaaagccaagaacatcttccgtgtgcgtttccat
gacccgtctcagggccagtcccacacgctgcaggtcaacgacgtcttccacaagcagcag
tggctcaactgcctgcgcagcgccatctccgtccaccaccctgccgacgtcaccacgtcc
gcttcctccccggcagccgacgcccactctaagcggcgctcctccaaaatctccatcatc
cacacggaggaggccgacgagaactgccctttgacgcccgcaggtgcaacgtccgcctcc
agtttgctatgcggggacgagacccccagtcccacctcatcgtctccctcctcatcgtct
ccctcctcccgctcctcatcctcctcttcatcaccactatcctccccgtcgcccaaacac
aaaaccaaaaaggacaagcgctcactcagtgccttagggaagaggaaggagaccatggtg
taa
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