Oncorhynchus tshawytscha (Chinook salmon): 112215021
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Entry
112215021 CDS
T05605
Name
(RefSeq) host cell factor 2-like
KO
K27390
host cell factor 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112215021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112215021
03029 Mitochondrial biogenesis [BR:
otw03029
]
112215021
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
112215021
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
112215021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
Kelch_FKB95
fn3
NANM
Beta-prop_TYW4
Motif
Other DBs
NCBI-GeneID:
112215021
NCBI-ProteinID:
XP_042167656
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All DBs
Position
LG33:complement(13131087..13137416)
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AA seq
716 aa
AA seq
DB search
MDRTPVCGVPNGTMDPLWKKVNSFTGPIPRSRHGHRAAAIRELIIVFGGGNEGIAEELHV
YNTVSKQWFLPAVRGDIPPGCAAHGFACEGTRILVFGGMVEFGKYNNSLYELQASRWLWK
KLKPRPPKNGIPPPCPRLGHSLTLIGNKCYLFGGLANDSEDPNGNVPRYLDDFYELELQS
VSGVKGWNIPDTKGVGPWARESHTSVAYTGSGSPKLYIFGGMRGSHLDDLWQLDLESMTW
STPDTKGPPPLPRSLHSANVIENKMYVFGGWVPVPETDKPNTLGAEWICTNSLSVLNLDT
MTWQSLGPDQQQGQTVSQGDQEEPQPSSGGPRARAGHCAASIGSRLYIWSGRDGYQKSWN
YQVCCQDLWYLETERPSTPAAVLLVKSTVSMLHVAWRPLPAAECYILQLQPVSPSNTPSN
PTAQPSTGAQERNPQDQYVQSAQVPDDPTSQEAQNTSQQEVASGQKETSMEVSEAVRDPH
PEGEGESEWFDAGVFKTLFSEATHYYLPPGNDFIPTIYSRPTNTKEREKQELCPGVAYRF
RVAGINSCGQGDFSPASEFKTCQPGFPGAPSAVKITKANDSVHITWDSPTSPSGKILEYS
MYLAVRKSRSSSSERPGQLAFIRIYRSTKTSCTVSPAHLANAYIDSSSPNRPAVSFRIAA
KNEQGYGPATQIRWLQDASKLKDSSTQPDGSPTEAEHEAADRLKMDCQTLADTQER
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggaccgaactccggtgtgtggcgttcctaacggtacaatggacccgttatggaaaaaa
gtcaactcatttactggacctattccccggtcaagacacggacaccgagcagcggctatt
cgggaacttattatcgtgtttggaggtggaaacgaggggatagcggaggagctccatgtt
tacaacaccgtttctaagcagtggtttctcccagcggtgagaggggacatccctccaggc
tgtgctgcccatgggtttgcctgtgagggaacccgcatcctggtctttggcggcatggtg
gagtttggcaaatacaacaacagcctgtacgagctacaggcgagccgctggctgtggaag
aagttgaaacccaggccacccaagaacggcataccgcccccctgtccccgccttggacac
agcttgaccctcattgggaacaagtgctacctgtttgggggactggccaatgacagtgag
gaccccaatggcaatgtcccaaggtacctggatgacttttatgagctagagctgcagtca
gtgtcaggggtgaagggttggaacattccagatactaagggcgtgggtccatgggctcga
gagtcccacacgtcggtagcatacactgggtcaggctcccccaaactctacatcttcgga
ggaatgagaggcagtcaccttgatgacctctggcagcttgacctcgaatctatgacatgg
tctacacctgacactaaaggaccccctcctctacccagaagccttcactctgccaacgtt
atagaaaacaagatgtatgttttcggggggtgggtccccgttccagagacagacaaacct
aacaccctgggagctgaatggatctgtaccaactccttatccgtgctcaacttagacacc
atgacatggcagagcctaggcccagatcagcaacaggggcagacagtgagccagggtgac
caggaagagccccagcccagcagcgggggaccccgagccagggcaggccactgtgctgcc
tctatcggctcccgcctctacatctggagcggccgtgacggctaccagaagagctggaac
taccaggtgtgctgccaggatctatggtatctggagacggagcggccctccaccccagca
gcagtactactggtcaagtccaccgtcagcatgctccatgtggcctggcgccccctacct
gcagcagagtgttacatcctccagctgcagcccgtctccccctctaacaccccctctaac
cccacagcccaacccagcacaggtgcccaggagaggaacccccaggaccaatatgtccag
tcagctcaggtcccagacgaccctacctcacaggaagcccagaatacatcccaacaggag
gtggcttcagggcagaaagagacttccatggaagtgtcagaggctgttagagacccccat
ccagagggggagggtgagtctgagtggtttgatgctggagtgttcaaaaccctgttctct
gaggctacccactactacctgccacctgggaatgactttattcccaccatctacagcaga
cccactaacactaaagagagggagaagcaggagctgtgtccaggtgtagcctacaggttc
agagtagcaggcatcaacagctgtggtcagggagacttcagccctgccagcgagttcaaa
acctgccagcccggcttccccggagcgccctcagctgtcaagatcaccaaggctaatgac
tcggtccacatcacatgggactcccccacctccccgtcaggtaagatcttggagtactcc
atgtacctggcggtgaggaagagccggtccagcagctctgagcgtcctggccagctggcc
ttcatcaggatctaccgcagcaccaagacctcttgcaccgtcagccccgcccacctggcc
aacgcctacattgacagctcctcccccaaccggccagctgtcagcttccgcattgccgcc
aagaacgagcagggctacgggcccgccacacagatccgctggctacaggatgccagtaaa
ctcaaagactcgtcaacacaaccagacggcagccccacggaggcagaacacgaggcagca
gacaggttgaagatggactgccagacgctcgccgatacccaggaaagatga
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