Oncorhynchus tshawytscha (Chinook salmon): 112215060
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Entry
112215060 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 7-like isoform X1
KO
K13710
Rho guanine nucleotide exchange factor 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112215060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112215060
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112215060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF67_u2
RhoGEF
betaPIX_CC
SH3_2
SH3_1
SH3_9
PH
SOS1_NGEF_PH
NDC80_loop
Syntaxin
Motif
Other DBs
NCBI-GeneID:
112215060
NCBI-ProteinID:
XP_042175800
LinkDB
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Position
LG03:complement(67747756..67799409)
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AA seq
643 aa
AA seq
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MCEGSRTQLLVKARFNFEQTNEDELSFNKSDVINVTRQEEGGWWEGSLNGKTGWFPSNYV
REIKGCDKQVSPKSGTLKSPPKGFDTTAISKTYYNLVLQNILETETEYSKDLQSLLTNYL
RSLQSTEKLSSTDVYLILGNLEEISTFQQMLVQSLEECTKLPESQQKVGSFFLNLMPQMK
ALYVGYCSNHPSAVNVLTQHSEELGEFMEGKGASSPGILTLTTGLSKPFMRLDTYPTLTK
ELERHMEESHPDLPDIQKCMTTFNSLSAQCQEVRKRKELELQIVTESIRLWKGEDIRTLG
SVLYMSQALVNSPGAEEKCEHYLMLFPHVLLMLSATPRMSGFIFQGKLPLSGMTVTPLED
SETHKNSFQLSGHLFECLQVVCNSQQDLQDWVDHLTRQTRQATTPSHKPLTVPCHTLPSH
PLTPSRHAESRAITVAPAYHTLPHPSSHGAPHSTMMWGPLEPPNTPKPWSLSCLRPAPPL
RPSAALCYKEDLSKSPKSVKKLLPKRKPERKPSEEESALRKSTAALEEDAQILKVIEAYC
TSAKTRQTLNSRVTRSDTGLQVIIPGEEIIMEETMSNIHSVVGEKSLEDVVYALRDEVQE
LQQDNKKMKRSLEEEQRARKELDKVVRRVSQSMNNHTWDETNL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagggcagccggacgcagctattggtcaaggctcgcttcaactttgagcagacc
aatgaggacgagctgtccttcaacaagagtgatgtcatcaacgtgacacgccaggaggag
ggcggctggtgggaggggagcctcaacggcaagaccggctggttccctagcaactatgtc
cgtgagattaaaggctgtgacaaacaagtgtctcccaaatctgggaccctgaagagtcct
ccaaaaggctttgacactacagccatcagcaagacctactacaacctggtgctgcagaac
attttagaaacagagacagaatattccaaggacctccagagccttctgactaactacctg
cgatctctccagagcacagagaaactgagcagtacagatgtgtatctgatcctggggaac
ctggaggagatcagcaccttccagcagatgctcgtccaatcactggaggagtgcaccaaa
cttccagagagccagcagaaggtagggagcttcttcctgaatctcatgccccagatgaag
gctctctatgtgggttactgctccaaccacccctctgcagtcaacgtgctcacccagcac
agtgaggagctgggggagtttatggaggggaaaggagccagtagtccaggtatcctgact
ctgaccacaggtctcagtaaacccttcatgaggctggacacataccccacactaacgaag
gaactggagagacacatggaggagagtcaccccgacctgccagacatccagaagtgtatg
acaacattcaacagcctctcggcccagtgccaggaggtgaggaagaggaaggagctggag
ctgcagatagtgactgagtccatcaggctgtggaagggagaggacatcagaacactgggc
tctgttctctacatgagtcaggctctggttaacagcccaggagcagaggagaagtgtgag
cattacctcatgctcttccctcatgtcctcctcatgctgtctgccactccaaggatgagt
ggctttatattccaggggaagctgccactgtctggtatgactgtgaccccgctagaggac
agtgagacccacaaaaactcctttcagctttctggccatctatttgagtgtcttcaggtg
gtgtgtaacagtcagcaggacctgcaggactgggtggaccatctgacccgtcagaccaga
caagccaccacccccagccacaaacccctcacggtcccctgccacacgttgccctcccac
cctttgactccatcccgtcatgcagagagccgtgcgataactgtggccccagcctaccac
accctgccccacccctcatcacacggggctccacacagcaccatgatgtgggggcctctg
gagccccccaacacccccaaaccctggagcctcagctgcctgcgtcctgcaccccccctc
aggccctctgcagcactctgctacaaggaggacctcagtaagagtcctaagagtgtaaag
aagctccttcctaaacgaaagcctgagaggaaaccgtcagaagaggagtctgccctgagg
aagagtacagctgctctagaggaagatgctcagatcctgaaggtgatagaagcttactgt
accagcgccaagaccagacagaccctcaattccagggtgacgcggagtgacacagggctg
caggtcatcatccccggagaggagatcatcatggaggagacgatgagcaacatacattct
gtggttggagagaagagcctggaggatgtagtgtatgccctgagggacgaggtacaggag
ctccaacaggacaataagaagatgaagaggtcactggaggaggagcagagggcacggaaa
gagctggataaggttgtccggagggtgtcacagagtatgaataaccacacctgggacgag
actaacttatga
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