Oncorhynchus tshawytscha (Chinook salmon): 112215162
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Entry
112215162 CDS
T05605
Name
(RefSeq) glutamate receptor-interacting protein 2-like
KO
K20251
glutamate receptor-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112215162
Membrane trafficking [BR:
otw04131
]
Protein recycling
Others
Glutamate receptor-interacting proteins (GRIPs)
112215162
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
112215162
NCBI-ProteinID:
XP_024229875
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Position
LG16:44292992..44362518
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AA seq
1150 aa
AA seq
DB search
MGNPKLITLAFSQTESMRKGGGKRRMFSFSLRCRFGIIRGRTKDDGPYSKGSKDSGGTEH
ALTSRRRSIKEDYWGMTTLDLIKREGSSLGLTISGGSDKDGKPRVSNLRPGGLAARSDQL
NVGDYIKSVNGINLSKLRHEEIISLLKNIGERVVLEVDYELPPFVQNTPTSVIAKTIEVC
LYKEGNSFGFVMRGGFHEDWHRSRPLVVTYVRHGGPADREGTLKAGDRVLSIGGKPLHRE
KHADALTMLMQCSQEALFLIEYDVSLMESVQQASGPLLVEIVKCPAASLGVSLATAVYRN
KQVIIIDKIKQASVVERCGALQIGDLILSIDGTSTEHCSLMEATQLLAQTSDIVKLEILP
ANQSRLPMRPQDTVKVQKSNLQHWEPTANYSHTQHCKTWSSPSHQLNQQDHCKSLVCGGF
SPSSTATSGYSSTLPCPIPPVAPTSPHSTTHKRCQRSKEHKSSLSLASSSVGPGGQVVHV
ETSEVVLRGDPLLGFGVQLQGGVFATETLSAPPVIRFIEPDSPAERCGLLQVGDRLLLIN
RITTEDGTLEEANQLLRNASLANKVTLEVEFDVAESVVPSSGMFHVKLPKRRGVDLGITI
SASKRPEKALIISDIRKGSIAHRTGTLEPGDRLLAIDNVRLENCTMEDAMHVLQQAEDMV
KLRIQKDEDNADELEMSGSIIYTVELKRYNGPLGITISGTEEPFDPIVISGLTKKGLAER
TGAIHIGDRVLAINCVSLKGKPLSEAIHLLQMAGETVTLKIKKRQDESDGQQMSEQAGFP
SDTEDELTDYQKTSKHSGVYSATGPSVYSAMSSWDGSGIDTGYGSQGTYLHRGADLTFQP
NEWRRTKPTRTHLTSTGLTAFTHHSHLYDGRYDEDDWDKAAGTSPLCSAMPALPPLLCRP
HPFQTRSRHPQSQNSKAPLMFWLLRCHRYASPPHCHGTLNQEDTFWSQALQDLETCGQSE
ILRELEASMTGSTLSLYLASQEVLKSRISPVKRGPIHDEPKTKGNLQRSNRTRDTPPRGR
GETQETTSPTALELLKVTLRKDPDCGDFGFSVSDGFLEKGIYVNMIRPDGPANQAGLKPY
DRILQVNRVRTRDFDCFLTVSLITEAGDSLDLVISRNSLAQADKGPPQDCEDPSDSLLSF
LHYRTNSIAL
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacccaaagctcatcaccctggccttctctcagaccgagtccatgaggaaagga
ggaggaaagaggaggatgttctccttttcactccgttgtcggttcgggatcatcagaggg
aggaccaaagatgatgggccatactctaagggcagcaaggactctggagggaccgagcat
gcccttacctccaggagacgcagtattaaagaggactactggggcatgaccacgttggac
ctgattaaaagggaaggcagcagcctgggcctcaccatctccggggggtccgataaggac
ggcaagcccagagtgtcaaacctgcggccaggtgggctagctgccaggagtgaccagctg
aatgtgggagactacatcaagtcagtgaacggcatcaacctgtccaagctccgccacgag
gagatcatcagcctgctgaagaacataggagagcgtgtggttctggaagtggattacgaa
ctacctccttttgtccagaacactcccacaagtgttatagctaagactatagaggtgtgc
ctatacaaggagggcaacagctttggattcgtcatgagaggagggttccatgaagactgg
cacaggtctcgtcctctggtagtgacctacgtacggcatgggggtccagctgatcgagag
ggcacactgaaggctggtgaccgtgtgctgagcataggcgggaagcccttacaccgagag
aagcatgctgacgctctgactatgctgatgcagtgtagccaggaagccctgttcctgatt
gagtatgatgtctccctcatggagtcagtgcagcaggcctctggccccctactggtggag
atagtgaagtgtcctgcagccagcctgggtgttagcctagctactgctgtgtacaggaac
aaacaggtcatcatcatcgacaagatcaaacaagccagtgtggtggaaaggtgtggggca
ttgcaaataggtgatctcattctgtctatagacgggaccagcactgagcactgttccctg
atggaggccacgcagctattggcccaaacctctgacattgtcaaattggagatccttcca
gccaatcagagcagacttcccatgagaccccaagacacagtgaaagtacagaaaagcaac
cttcaacactgggagcccactgccaactacagccacacccagcactgcaagacatggagc
agtcccagccaccagctcaaccagcaggaccactgcaaatctctggtgtgtggtggcttc
tccccttcctccacagccacctcagggtacagcagcaccctgccctgccccatccccccc
gtcgcccccacaagcccccacagcacgacacacaagagatgccagcggagtaaggagcac
aagagctcactgtccctagcatccagctcagtgggccctgggggtcaggttgttcacgtg
gagaccagcgaggtcgtcctgaggggggatccactcctagggtttggggttcaactgcag
gggggtgtttttgccacagagaccctgtccgcccccccagtcatccgcttcatcgagccc
gacagccctgccgaaagatgtggacttctgcaggtgggggacagactcctgttaatcaac
agaatcactacagaggatggaacactggaggaagccaatcaactactgcgaaatgcctct
ctggccaataaggtcactctggaggtcgagtttgatgtagcagaatcagtggttccaagt
agtggcatgttccatgtgaagctgcccaagaggaggggagtagatcttggcatcacaatc
agtgcaagcaagagacccgaaaaagctctcatcatctctgacatcagaaaaggaagcata
gctcacaggacaggcacgttggagccaggggacaggctgctggctatcgacaacgtgcgt
ctggagaactgcaccatggaggacgccatgcatgtgctgcagcaggcagaggacatggtc
aagctccggatccaaaaggatgaggataacgctgatgagctggagatgtctggttccatt
atctacacagtggagctgaagcgttacaacggcccgctgggtattaccatctcaggcaca
gaggagccttttgaccctatcgtcatctcaggcctcaccaagaagggcctggctgaaagg
actggtgccatccatataggggaccgtgtcctggccatcaactgtgtgagtctgaagggg
aaacccctgagtgaggccatccatctactccaaatggccggagagactgtcacccttaaa
atcaagaaacgccaagatgagtcggatgggcagcagatgtcggagcaggcaggattcccg
agcgacacagaggatgagctgactgactaccagaagaccagtaaacactcaggggtgtac
tctgccaccgggcccagcgtgtactctgccatgagctcctgggatggttccggcatcgac
actggctacggcagccaaggaacgtatctccacagaggtgcagatttgaccttccagcct
aacgagtggagacgcaccaaaccgaccaggactcacctcacctccactggccttaccgcc
tttacccaccactcccacctctacgatgggagatacgatgaggatgactgggataaggct
gctgggacctctccgctatgcagtgcaatgcctgcattacccccactgctttgcaggcca
cacccgtttcaaaccagaagcaggcatccccagtcccagaacagcaaggctcctctcatg
ttctggttactgcgttgtcatagatacgccagcccccctcattgccatggcaccctgaac
caggaggacaccttctggtcccaggccctgcaggacctagagacctgcggccaatcagag
atactcagggagctggaggcgtccatgacaggcagcactcttagcctgtatctggcgtcc
caggaagtgctaaagagcagaatcagtcctgtgaagaggggtcccatccatgacgagcct
aaaaccaaaggcaacctgcagaggtccaacaggaccagggacacaccccccagagggaga
ggagagacccaggagaccacttcccctacagccctggaactgctgaaggtgaccctgagg
aaggacccagactgtggagactttggtttcagtgtgtcagatggtttcctagagaaaggc
atctacgtcaacatgatccgaccagatggtcctgccaaccaggccgggttgaaaccctat
gaccgcattctgcaggtgaacagagtgagaaccagagactttgactgcttcctgactgtt
tctctcatcactgaagcaggagacagcttggacctggtcatcagcagaaactccctggca
caggcagataaggggccacctcaggactgcgaggacccttctgactccctgttaagcttc
ctacattataggaccaatagtatcgccctgtga
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