Oncorhynchus tshawytscha (Chinook salmon): 112215165
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Entry
112215165 CDS
T05605
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112215165
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GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
PDZ_2
MAGI_u1
WW
DUF6288
Tricorn_PDZ
Serglycin
Motif
Other DBs
NCBI-GeneID:
112215165
NCBI-ProteinID:
XP_042155140
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Position
LG16:45111665..45176096
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AA seq
1454 aa
AA seq
DB search
MSIEDFLNLEQCGTLLEIGTYEGNYYGTPKPPRQPVVGTVIFSDAVLLNGPPGSQQSTPK
HTKSYNDMQNARVVPADYEDDDQATEMNNSFTGNSSDQDESRGGVLRPYPARENAPSYGL
NNVAASTSDNGQQTHAQPQASPEDPLGPLPDNWEMAYTENGEVYFIDHNTKTTSWIDPRC
LEKPLKPLEECEDDEGVHTEEPDNELELPAGWEKIDDPVYGVYYVDHINRKTQYENPIVE
ARRRMQLEQQQPQPPEEWIEEHSSAGAPLANYANNHLETYRDPQVPPPLPPAPGGAKRGK
PFFTRNPAELKGTFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAAVDGKMETG
DVIVSVNDTIVLGYTHAQVVKIFQSIPIGSMVDLALCRGYPLPFDPDDPNTSLVTSVAIL
DKEPIIVNGQESYDSPSSHGSQTGGPVNGMREPRAHSPSAEVVSNGSHGYSSSDVVTLAS
SIAGQPELITVHMEKGDKGFGFTIADSLTGGGQRVKQIVDYPRCRGLKESDILMEVNKRN
VQNMSHNQVVDLLSKCPRGSEVTMLVQRGVVAAKRSPKLVQQLERKDSQSSSQHSVCSHR
STHTDSPSHPPSNMPSEAMAPPPAAPTQPLPGLPPLPTQDPGDGTMTLQKKPDPFKIWAQ
SRSMYESRQPDFQEQEIFLWRKDTGFGFRILGGNEPGEPIYIGHIVKYGAADEDGRLRSG
DELICVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKSSGYGVSKGEGDVPPSPASSH
HSSTQAPSLTEGKRTPQGSQNSLNTVSSGSGSTSGIGSGGGGGSGSAVVTAALQPYDVEI
QRGENEGFGFVIVSSVSRPDAGTTFAGNACVAMPHKIGRIIEGSPADRCGKLKVGDRILS
VNGCSITNKSHSDIVNLIKEAGNTVSLRIIPGDESSNASLLTNAEKIATITTTHTPQTAT
EPRNNSKSKQAPPPPPPTQAQPSQDAEFYSVDLERDSKGFGFSLRGGREYNMDLYVLRLA
EDGAAGRNGKMRVGDEILEINGESTKNMKHARAIELIKNGGRRAHLVLKRGDGSVPEYDS
SHDGHSPTPGAQNSPEVRTLPPNSRYHTPSESSYPQDLHKPSRHKDAAQGRDRDRMEHQV
RHFNPHHHHTWNNNHSHATPSQHYPENSGGNNKKSRGRKVNKSESESGISKLLKTLRKDS
SRKKAAAAAAATERELSASSSTLDPRYSRPRRGSLDRSPTRKHKASPDRWRSKSMDRRVE
RAHRDRTPEKENEDGGFLSHAATPEQPLYDRRLLREPQTPGRAYLQATTPERLNKRASSL
SLSRGWTPDRGSLKNGNLLRDSPVETREDRYGMNGTPERRYRSERDSSPDSSYSREELNY
CSTLKNNASTHNHTGYNAAGHCNNNTAGHNNTAGHNTAGHNKAAGHNNGVGRAQNQFPVP
MRRLYKESPKDLSI
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgtccatagaggacttcctaaatcttgagcagtgtggaacactactggaaataggaacg
tatgaaggtaactattatgggacccccaagccgccgaggcagcccgtggttgggacagtg
attttcagtgatgctgtgctcctcaacggccccccaggctcccagcagtcaactcccaag
cacaccaagtcctacaatgacatgcaaaacgcccgagtagtgcctgctgactacgaggat
gacgaccaggccacggaaatgaacaacagttttacaggtaactctagcgaccaggacgag
agccgcggcggtgtacttcggccatatcccgcgcgcgagaatgctccgtcctatggtctg
aacaacgtggccgcctccacctcggacaacgggcagcagacacatgcccaaccccaggcc
tctcctgaagaccccctgggacccctgccagacaactgggagatggcctacacagagaat
ggagaagtctacttcatagaccacaacacaaagaccacatcgtggatcgacccccggtgt
cttgagaaacctctgaaacctctggaagagtgtgaggatgatgaaggggtacatactgag
gaaccagacaatgaactagagctgcctgcaggatgggagaagatagatgacccagtgtat
ggggtgtactacgtagatcacatcaacaggaagacccagtatgagaaccccatagtggag
gctaggcgcaggatgcagctggagcagcagcagccgcagcctcctgaagagtggatagag
gagcactcctcagctggtgctcccctggccaactatgccaataaccacctagagacgtac
cgcgacccgcaggtcccgcccccgctgccccctgctccgggaggggccaaacgagggaag
ccattcttcacacggaacccagcagagctgaagggaactttcatcaacaccaaactgaag
aagagccgccgcggattcggcttcaccgtagttgggggcgatgagccggatgagttcctg
cagatcaagagtttagtcctggatggtcctgctgctgtggatgggaagatggagacaggt
gacgtgatagtgagtgtgaacgacaccatcgttctgggctacacccacgcccaggtggtg
aagattttccagtccatcccgatcggctccatggtggacctggccctgtgccgtggctac
cccctgccatttgaccctgacgaccccaacaccagcctggtgacctccgtggccatcctg
gacaaggagcccatcatcgtcaatggccaggagagctacgactctccgtccagccacggc
agtcagaccggagggcctgttaacgggatgagggagccgcgggcccacagtccctcggca
gaggtggtgtccaacggctctcacggctactcctccagcgacgtggtcaccctggcatca
tccatcgctgggcagccagagctgatcacagtgcacatggagaaaggcgataagggcttt
gggttcaccattgctgacagcctgacgggagggggtcagagggtgaagcagatcgtggat
tacccccgctgcaggggcctgaaggagtcagacattctgatggaggtgaacaagaggaat
gtccagaacatgagccacaatcaggtggtggacctgctcagcaagtgtcccagagggagc
gaggtcaccatgctggtgcagagaggagtggtggcggccaagaggagccccaagctggtg
cagcagctggagaggaaggacagtcagagcagctcccagcacagtgtgtgcagccatcgc
agcacccacacagactcccccagccaccccccctccaacatgcccagtgaggccatggca
ccccctccggccgcacccactcagccgctacctggcttgcctccgctgcccacccaggac
cctggagatggcaccatgaccctccagaagaagccagaccccttcaagatctgggcccag
tccaggagcatgtatgagagcagacagccagatttccaggagcaggagattttcctgtgg
cggaaggatacaggatttgggttccgcatccttggaggaaatgagcctggggagccaatc
tacattggacacatagtgaagtacggtgcagcagatgaggacggacgcctgcgttctggg
gacgagctcatctgtgtggacggcacagcggtggtggggaagtctcaccagctggtggtg
cagctgatgcagcaggccgccaagcagggccacgtcaacctcaccgtccgacgcaagagc
tctggatacggagtttcgaaaggggagggtgacgtgcccccgtcccctgcctcgtcccac
cacagcagcacccaggccccctccctgacggagggcaagcgaaccccccagggcagccag
aactccctcaacacggtcagttctggcagtggctccaccagtggcatcggcagtggggga
ggaggtggctccggcagtgctgtggtcaccgcagccctgcagccctatgacgtggagatc
caacgtggagagaatgagggcttcggattcgtcattgtgtcatctgtctctaggcctgat
gctgggactacgttcgctggcaatgcatgtgtggccatgccccacaaaatagggcgcatc
atcgaggggagccctgcggaccgctgtgggaagctgaaggtgggcgaccgcatcttgtcc
gtcaacggctgctccattaccaacaagtcccactcggacatcgtcaacctgatcaaggag
gccgggaacacagtctctctgaggatcattcctggtgatgagtcctccaacgcgtctctg
ttgaccaacgctgagaagattgccaccatcaccaccacgcacacaccccaaactgccacg
gagcctcggaacaactcaaagtcgaaacaggctcctcctccacctcctccaacacaagct
cagccctcacaggatgccgagttctactctgtggatctggagcgggacagtaaaggcttt
gggttcagcctgagaggaggacgggagtacaacatggacctatatgtgttgaggctggct
gaggacggggcggctggcaggaatggcaagatgagggtgggagatgagatcctggagatc
aatggcgagagcacaaagaacatgaagcacgcacgggccatcgagctgatcaagaatggt
ggccggagggcacacctggtcctcaagaggggcgatggatctgtacctgaatatgactcc
agccatgacgggcactctcccacacccggggcacaaaactctccggaagtgagaaccctg
ccaccaaacagccgatatcacaccccatcggagtcaagttatccacaagaccttcacaaa
ccatcacgccacaaggatgctgcgcagggccgagacagggacaggatggagcaccaggtc
cggcactttaacccccaccaccatcacacctggaacaacaaccacagccatgccaccccc
agccaacactaccctgaaaacagcggcggcaacaataagaagagccggggacgcaaagtc
aacaagtcagagtcagagagcggcatctcaaaactattaaagactctgcgtaaggacagc
tctaggaagaaggctgcagctgcagcggcagctacagagcgggagctctccgctagtagc
agtactctagacccgaggtacagtcgaccacgccgcggctccctcgaccgttcgcccacc
cgtaaacataaagcctcccctgaccgatggcggtccaagtccatggaccgcagggtcgag
cgagcacaccgagaccgcacacccgaaaaggagaacgaggacggaggtttcctcagtcat
gcggctactcctgaacaaccactctacgaccgcaggctcctgagggaaccacagaccccg
ggccgagcctacttacaggccaccaccccagagcgcctgaacaaaagggcttcctccctg
tctctttccagggggtggactcctgacagaggcagcttgaagaacggcaacctcctgagg
gactcgccggttgagacgagggaggataggtatgggatgaacggaacgccagagagacgg
tacaggtcagagagagattcgtctccagacagcagctatagcagggaggagctgaactac
tgcagtacactgaagaacaatgcctccactcacaaccacacaggctacaatgcagcagga
cactgcaacaacaacacagcaggacacaacaacacagcaggacacaacacagcaggacac
aacaaagcagcaggacacaacaacggagtaggtcgcgcccagaaccagttccccgtgcct
atgagaaggctttacaaagagagccccaaggacctcagcatctga
DBGET
integrated database retrieval system
