Oncorhynchus tshawytscha (Chinook salmon): 112215174
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Entry
112215174 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: protein RUFY3-like
KO
K24776
protein RUFY3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112215174
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
112215174
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RUN
Trimer_CC
DUF1664
DUF641
VGPC1_C
Motif
Other DBs
NCBI-GeneID:
112215174
NCBI-ProteinID:
XP_042176141
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Position
LG04:complement(883157..934207)
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AA seq
468 aa
AA seq
DB search
MADLMAQPDAPTPTTDKITQAARETIYLCNFRVSVDGEWLCLRELNDISLTPDPEPAHED
PKDPIAIERLNLMNMAKLSIKGLIESALNLGRTLDSDYAPLQQFFVVMEHCLKHGLKTKK
TFLGQNKSFWGALELVEKLTPEAGEITASVKDLPGLKTPLGRGRAWLRLALMQKKLSDYM
KTIINRKDLLSEFYESNALMMEEEGAVIAGLLVGLNVIDANLCMKGEDLDSQVGVIDFSM
YLKDGQSSKTAEGDGQITAILDQKNYVEELNRHLSASVNNLQAKVDAMEKSNTKLTEELA
VANNRIITLQEDVERVKEESSNQSSRKASRAGDSLADGQVXGEARKQLKEETQLRLDVEK
ELEVQIGMKQEMELSMKMLETDMCEKQDALVELRQQLEDLRXLNQQLAQKSQNLEAGAKQ
KSEVISRLEEKTNQMAGTIKQLESSEKDCVKQARSLSSNAGKLLQKQL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcagacctgatggcccagcccgacgccccgactcccaccaccgacaagatcacgcag
gccgcccgggagaccatctacctgtgtaacttccgcgtgtcggtggacggagaatggctc
tgtctcagggagctgaatgacatctccctcaccccagacccagagccagcccacgaagat
ccgaaggaccctatagccatcgagcggttgaacctgatgaacatggctaagctgagcatc
aagggtctgattgagtcggccctgaacctgggcaggaccttggactctgactacgctccg
ttacagcagttcttcgtggtcatggagcactgcctcaaacacggactcaaaaccaagaag
acgttcctggggcagaacaagtctttctggggggccctggagctggtggagaaactcacc
cctgaggctggagagatcaccgccagcgtcaaggacctgccaggactcaaaaccccatta
ggaagagggcgggcctggctgcgattggccctgatgcagaagaagctgtcagattacatg
aagaccatcatcaacagaaaggacctgctcagtgagttctacgagtccaacgctctcatg
atggaggaggaaggagccgtgatcgccggactgctggttgggttgaacgtcatcgatgct
aatctctgtatgaagggagaagacctcgactcacaggtcggggtgatagatttctccatg
tatcttaaggatggtcaaagcagcaagacggcagaaggggatggccagatcacagccatc
ctggaccagaagaactatgttgaggagctcaacagacacctgagtgcttcagtcaacaac
ctgcaggccaaagtagacgctatggagaagtccaacaccaagctcactgaagagcttgca
gtagccaacaacaggatcatcaccctacaagaggatgtagaacgagtcaaggaggagagc
tccaaccagtccagtcgcaaggcatcgcgggcaggggacagcttggcagacggtcaggtg
nctggggaggcacgcaaacagctcaaggaggaaacacagctacgattggatgtagagaag
gagttggaggttcagattggtatgaagcaggagatggagctgtctatgaagatgttagag
acggatatgtgtgagaaacaggatgctctggttgagctacgacaacagctagaagacctc
aggntcctcaaccagcagctagcgcagaagtcccagaacttggaggcgggcgccaagcag
aagagtgaggtcatcagtcgcctggaggagaagactaatcagatggctggaactataaaa
cagctggagagcagtgagaaagactgtgtgaagcaggccagaagcttgagttccaatgca
gggaaactgcttcagaagcaactatag
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