Oncorhynchus tshawytscha (Chinook salmon): 112215176
Help
Entry
112215176 CDS
T05605
Name
(RefSeq) piezo-type mechanosensitive ion channel component 2
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112215176
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112215176
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112215176
Ion channels [BR:
otw04040
]
Other channels
Mechanosensitive channel (Piezo)
112215176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_RRas_bdg
PIEZO
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
112215176
NCBI-ProteinID:
XP_042155847
LinkDB
All DBs
Position
LG16:complement(49618353..49644437)
Genome browser
AA seq
2679 aa
AA seq
DB search
MQITFAYVPQNENEHWENVLYHLGIVRFSLVDAGNTLRLLAPDLGLFLSGLFILCLVKKL
LCPAPQLNVHENCIKPSDPEDVEMSDSESEVESDVTDGSSCDNSDEITAAPVTPPQFVQK
FIAFALGLRLLLSAIMNTAGKVVVTILLGLAGIALPSLTSAVYFGTFLGLVWWWVFLRSL
SLLFFSTLCVMMAIFSAGHLLCLYLYQLPLAQQIVPPQDIYARLFGMTAFIQTNETEPYS
LGLQADVSWPVFINPMVLLLLYYTMVALLHKWVYIPEEEDTLVKSESPVEIPEDPPSFSK
ILFISGDRLELLTSTDEETYMPDEEVQEPMVLLMSSSWHDLRGQEMGLLLGGPGAGYANC
HPPPQYEGIDLSPSQGGGSGVSMREGRRCGVSMREGWSEVSMREGWSEVSMREGRSEVSM
REGLSEVSMREGMSEVSMSEEENGPSGLAVFGLFIMKHSYISALIIMMVWSITYNSWLTF
ALLVWSCVIWMMRDRRRYAMMSAPFLAVYGTLLLLLAFLSGLRLRRDELYPGLPHAMLVD
FDMAIYPAPCIHLGGKVLYTFSFWLLFRQQQKEKQEEQDLKESDESLEEVKVLPPDEGET
SPIMEMLGSAVKGNLVKYWILFCCSMFFVVSFSGKVMVYKILYIVLFLFCVVLYQIRCDV
WRRVLKYFWAVVVGYSMVVLIAIYMYQFKTVSGLFRQIMGMSEEGLRDLGLEQYDTVELF
ARILLPAAFLLACILQLHYFNQDFLDLTNLDNVPVHHGPTRMKENVEKLQKRMAKEQSEQ
TSGESERVGSQDTLENDGLSASSEKPEEEQGGTVPPEERLTQWGLIVDRASLLLFQALAL
FQRAQEMGWRLLEVHSLKIVSTGIIWVSLQEVSLMNFMFLVLWTFALPFPRLRPIASSVS
SVWACVMVVCKMLYQLKVIKPLEYSSNCTASLVSANGTGLERNMAELLRRSVLYVKPVDP
AIWCGALRKCEDRILPCLSNHLTVLGLLVFEVTVSRHQLYYRLHNNLKVPTFSIIFQGIT
RQHLDHGILPCIKYFVNYFFYKFGLEMCFVVAVNVIGQRMDFYSLLHACALMAVLSRRRR
KAMGEVWPKYCCFTAGLMVLQYLLCIGIPPALCVDYPWRTSSQALTSNLIKWLYLPDFAM
RPSPSFIFYDHLLLLCSTLQWQVFEEENRAAVRLMAGENVEISRSLDPRSFNQYIPVNNF
LQCRSYLDIAKVFVFSYFFWLVLCLIFITGTTRINIFCLGYLVACFYFMLFGGSLLMKPV
RYILRLWDCLIGYTCFVIGMKNLLSLGSCAYLDSLLKNGCWLIQAFSMVCTVKGYDVSAP
DDECELPEGEAGIVWDAICFTVLLAQRRVFLSYYFLYVVSDLRASKILASRGAELFEAKV
KKLVAARLEMERKSVATLKKQMEKIKSKHKSKPGQGDAAMPPADIVPKGESEKAGNDQGK
WWKPWVSQPGVENNCGYHLFESDSEEEEEEVQEKKEEEAPLKKKSSFQIAYEAWATSSKA
ALDLHKKEENKMKNEEKRRAKRELQRQQGIERAESHELDELEEEESDEEEEKDNLFQRII
YSLKFLWVFILSLLDDLTEGLNSFCKDNQDITKVLRFERALLGQQQKKGKEVSQESVTRF
YENWMSRQSTLASLEDQDDIVLPISSPPPVPSSPRGYSKLKHTHSKISWGSSLSSCVTDE
TLLGSRQPTLDELDDPPLLQPTAEQLRRKLLKTANLDLGSFDSEVPPPSSHDDTVPDKEG
REGEDACKKVGESTAEEEYRMEKEEWREEEEEEREKAVMFSGFISLDYLECDEKCDDFPD
SPRPLSETRNLTASELLLNNMFDDDEIEESDKFFQSLPRHLRLVFALYNTMVSKSEMLCY
FVIILNHMVSASLLSLILPILIFLWAMLSVPRPTKRFWMTAIIYTELIVVVKYFFQFGFF
PWTTSVYRGINADRPFALPNIIGVEKKYGYVLFDLIQMLALFFHRSILKCHGLWDNKEVE
MPDFFKKLKKKTEKIKMSGGEKKGDEPKRRLPCLPLQASTASLFCRCGKANSTEINGDMR
LTKRHSKKRHHNKVPLTRKESIKKLIRERMLEAKAAIIEVALHIYLPIRQFFYDIIHPEC
SPVCDVYALMFLIDVVNFIVIIFGYWAFGKHSAGADITDALGEDQVPSAFLVMLLIQFGT
MIVDRALYLRKTLMGKCVFQVVLVFGIHFWMFFILPGVTERRFNMNQVAQLWYFVKCIYF
GLSAYQIKCGYPNCVLGNFLTKNYNYLNLFLFQGFRLVPFLIELRAVMDWVWTDTTLSLG
SWICVEDIYANIFILKCWRESEKKYPHIPGQKKKMVVKYGMGGFIIFFLISVIWFPLLFM
SLVKSVAGVTNQPLDVSIQLSIAGYEPMFTMSAQEQNLVPYSVAGLNRLNNLYATHPSAM
QFLGNYMAEDIVIAKIKSDASLLWSISPASRDAMIHELSNSTHIYITLRWVLLRNASLSM
NVETMGEHTVKYEDRTLRDQIVQMLKGTRSDSVIIESLLPKFLRGSGGPVSNMATRLKVE
HSDRPEDLQTFAFFLPLSIKLQRAEDNRSAEGGQWWIVQECTPGQGHIQSSCHKIEIVVF
NDKVSPPSLDALAGQGIVGLYMSVVLVVGKFVREFFNGISRSIMFEELPCVDRVLKLCTD
IFVVRETGEMELEETLFEKLIFLYRSPETMIKITREKSD
NT seq
8040 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacttttgcctacgtacctcagaatgagaacgaacattgggaaaatgttctc
taccatttgggcattgtacggttcagtttggtggatgcagggaacactttgcgtctctta
gcccctgatctggggctcttcctgtctgggctcttcatactctgcctggtcaagaagctg
ctgtgccccgcgccacaacttaatgtccacgagaactgcatcaaaccctctgaccctgag
gatgtggagatgtccgactcagagtctgaagtcgaaagtgatgtcacagatggctcgtcc
tgtgacaactcagatgaaatcacagcggcgccggtaacccctcctcagtttgtccagaag
ttcattgcatttgcccttggactgcgcctcttgctgtcggccatcatgaacacagcaggg
aaagtagtggtcaccatactactggggctggcaggcatcgccctaccctccctgacttcg
gcagtgtatttcgggacattcctgggcctggtgtggtggtgggtgtttctccgctccctc
agcctgctgtttttcagtaccctctgcgtgatgatggctatattcagcgctggtcacctg
ctgtgcctctacctgtaccagcttcccctggcccaacagatcgtacccccacaggacatc
tacgccaggctgtttggtatgacagcgttcatccagaccaatgagactgagccatacagt
ctgggtctgcaggcagatgtcagctggcctgtcttcatcaaccccatggtgctgctgctc
ctctattacacaatggtggctttgctgcacaagtgggtctacatccctgaagaagaggat
actctggtgaagtctgagagtccagtagaaatcccagaggatccccccagcttctccaag
atcttattcatctcaggagacagattggagctactgaccagtacggatgaggaaacttac
atgccagatgaggaggtgcaggagccaatggtcttactgatgagcagctcatggcatgat
ctgagaggtcaggagatggggttactgctgggagggccaggggcagggtatgcaaactgc
caccctccaccacaatatgaaggaatagacttgtcaccctcacaaggggggggtagtggg
gtgtctatgagggaggggaggaggtgtggggtgtctatgagggaggggtggagtgaggtg
tctatgagggaggggtggagtgaggtgtctatgagggaggggaggagtgaggtgtctatg
agggaggggctgagtgaggtgtctatgagggaggggatgagtgaggtgtctatgagcgag
gaagagaatggccccagtggactggctgtgtttggcctgttcatcatgaagcacagctac
atcagcgcactcatcatcatgatggtgtggagcatcacctataacagctggctgacgttc
gccctgctggtgtggtcgtgtgtgatctggatgatgcgtgaccgtcggcgctacgccatg
atgagcgctcccttcctggcggtgtacggcaccttgctgttgctgctcgccttcctgagc
ggcctgaggctgcggcgggatgagctgtaccctggcctgccacatgccatgctggtggac
tttgacatggccatctacccagcaccctgcatccacctgggaggcaaggtgttgtacacc
ttcagcttttggctgctgttccggcaacaacagaaggagaaacaggaagagcaggatctc
aaggagtctgacgagtctctggaagaagtgaaagtactcccaccggatgaaggtgaaacc
tctcccataatggagatgctgggttcagcggtcaaaggaaacctggtgaagtactggatc
ctgttctgctgctccatgttctttgtggtcagcttctccgggaaggtgatggtctacaag
atcctctacatcgtgctgttcctcttctgtgtcgtcctctaccagatccgttgtgacgtg
tggaggcgagtgctgaagtacttctgggcggtggtggtgggctactccatggtggtcctg
attgccatctacatgtaccagttcaagactgtctctggcctgttcagacagatcatgggc
atgtctgaggaaggtctgcgtgatctcgggttggagcaatatgatactgtggagctgttt
gctcggatcctcctccctgcagccttcctattggcctgcatcctgcagctacactacttc
aaccaggacttcctggatctcaccaacctggataacgtacctgtccaccacggaccaacc
agaatgaaagaaaacgttgaaaagttacagaaacggatggcgaaggagcagagcgagcag
acgagtggggagtcggaacgtgtggggagccaggacacgttggagaatgatggactgtct
gcctcatcagagaaacccgaggaggagcaggggggaacagttcccccagaggagcgtctt
acccagtgggggttgattgtggaccgggccagcctgctgctgttccaggctctggctctc
ttccagcgggctcaggagatgggttggaggctgctggaggttcacagcctcaagattgtt
tccactggcatcatctgggtgtccctacaagaggtgtccctgatgaacttcatgttcctg
gttctgtggaccttcgccctgcccttcccccggctccgccccatcgcctccagtgtgtcc
tcggtctgggcctgtgtcatggtggtgtgtaagatgctgtaccagctcaaggtcatcaaa
cctctggagtactcctctaactgcaccgctagcctggtgtcagctaacgggacagggctg
gagaggaacatggcagagctgctgaggaggtctgtgctgtatgtgaagcctgttgaccca
gccatatggtgtggagccctgcgcaagtgtgaagacaggatcctgccctgtctcagcaac
cacctgacggtgctggggctgctggtgtttgaggtgacggtctctcgacaccagctctac
taccgccttcacaacaacctcaaggtccccaccttcagcattatcttccagggcatcaca
cgccagcacctggaccatggcatcctgccctgcatcaagtacttcgtcaactacttcttc
tacaagtttggcctggagatgtgctttgtggtggcggtgaatgtgattggccagcggatg
gatttctactcgctgctgcacgcctgtgctctgatggccgttctgtcacgacgacgcagg
aaggccatgggggaggtgtggcctaagtactgctgcttcactgcaggactcatggtgctg
cagtacctgctctgtatcggcatccctcccgctctctgtgtcgattatccatggaggacc
tccagtcaggctttgacctccaacctcatcaagtggctttacctgcctgactttgccatg
cgtccctccccttccttcatcttctacgaccacctcctgctgctgtgctccacgctgcag
tggcaggtgtttgaggaggagaaccgggctgccgtgcgcctcatggcaggggagaacgtg
gagatcagccgcagcctggacccgcgttccttcaaccagtacattcccgtcaacaacttc
ctccaatgcaggtcctacctggacatcgccaaagtgtttgtgttcagctacttcttctgg
ctagtgctgtgcctcatcttcatcacgggcaccacccgcatcaacatcttctgcctaggc
tacctggtagcctgcttctacttcatgctgtttggaggaagcctgctaatgaagcccgta
cgatacatcctcaggctctgggactgcctcatcggatacacttgcttcgtcattggcatg
aagaacctgctatcgcttggctcgtgtgcttatctggacagcctgttgaagaatggctgc
tggctcattcaggccttcagcatggtctgtacagtcaaaggctatgatgtctctgctcct
gatgatgagtgtgagctgccggagggggaggcgggcattgtgtgggatgcgatctgcttc
actgtgctcttggctcagagaagggttttcctcagctactacttcctgtatgtggtgtct
gacctcagggcatccaagatcctggcctccaggggtgctgagctctttgaagccaaggtg
aagaaactggttgctgccagactggagatggagaggaagtctgtggcgacgctgaagaaa
cagatggagaagatcaaatccaaacataagagtaagcctggccaaggagacgcagcaatg
ccccctgctgatatagtgccaaagggtgagagtgagaaggctgggaacgatcaggggaaa
tggtggaaaccatgggtctctcagcctggcgttgagaacaactgtggctaccatcttttt
gagagtgacagtgaagaggaagaggaggaagtccaggaaaagaaagaggaagaggctcca
ctaaagaagaaatcttcttttcagatagcctatgaggcatgggccacaagctccaaagca
gccctggatttgcacaaaaaagaagaaaacaagatgaaaaatgaggagaagaggagggca
aagagagagctgcaaagacagcaaggcattgagagagccgagtctcacgagttggacgag
ttggaggaggaagagagcgatgaagaggaggagaaagataacctatttcagaggatcatc
tactcactcaagtttctatgggtgtttatcctgtcccttttggatgacctcactgagggc
cttaactctttctgcaaagataaccaggacatcaccaaagtgctacgctttgagagggct
cttctaggccagcaacagaaaaaggggaaagaagtgtcacaggagagcgtgacgcgcttc
tatgagaactggatgtctaggcagagcactctggcctcgctggaagaccaagatgacata
gttctccccatctcctccccaccacctgtaccctcatcaccgcgaggttactcaaagctg
aaacacacccattccaaaatctcctggggtagcagcttgtccagctgcgtgacagacgag
accctgctggggtctcgacagcccactctggatgagctggatgaccctcctctactccag
ccaaccgccgagcaactcagacggaaactactgaaaactgccaacctggaccttggctca
tttgacagcgaagtccctccaccaagcagccatgatgatactgttcctgataaggagggc
cgtgaaggagaggatgcatgtaaaaaggtgggggagtctacagcggaggaggagtataga
atggagaaggaggaatggagggaggaagaagaggaagagagggaaaaagctgtgatgttt
tcgggatttatctccctggactatctggagtgtgatgagaagtgcgacgatttcccagac
tccccccggcctctgagtgagaccaggaacctcacggctagtgagctgctgctcaacaac
atgtttgatgacgatgaaattgaagagtctgataagtttttccagtctctcccgaggcac
ctgagactggtgtttgccctgtacaacaccatggtgtcgaagtcagagatgctgtgctac
tttgtgatcatcctgaaccacatggtgtctgcctccctgctcagcctgatcctgcctatc
ctcatcttcctctgggccatgctgtctgtgcctcgcccaaccaagcgcttctggatgact
gccatcatctacacagagctgattgtggtggtcaagtattttttccagtttggctttttc
ccctggaccacctcggtctaccgaggcatcaatgcagaccggccctttgctctgcccaac
atcattggggtagagaagaaatatggctatgttctctttgacttgatacaaatgctggct
ctgttcttccatcgctccattctgaagtgccacggtctttgggataacaaagaggtggag
atgccagacttcttcaagaagttaaagaagaagacggagaagattaagatgagtggagga
gaaaaaaaaggggacgagccgaagcgaagactgccctgcctccctctccaggcctcgact
gcgtccttgttttgcagatgtggaaaagccaactccactgagataaacggtgatatgcgg
ctcacaaagcgccactccaagaagaggcaccacaataaagttcccctgaccaggaaggag
agcatcaaaaagctgattagagaaaggatgctggaggctaaagctgctatcattgaagtt
gccctgcatatatacctacccatcaggcagttcttctatgacataattcacccagagtgc
agcccagtgtgtgacgtctacgctctcatgtttctgattgacgttgtcaacttcattgtc
atcatatttggatactgggcgtttgggaaacacagtgctggtgctgacatcacagatgct
cttggggaggaccaggtcccatcggccttcctggtcatgctgctcatccagtttggcacc
atgatagtggaccgcgctctatacctccgcaaaaccctaatgggaaaatgtgtcttccaa
gtggtgctggtgtttggtatccacttttggatgtttttcatactccctggggtgactgag
aggaggttcaacatgaaccaggtggcacagttgtggtactttgtgaagtgcatctacttt
ggcctctccgcctaccagatcaagtgtggctacccaaattgtgtgctgggaaacttcctg
accaagaactacaactacctcaacctattcctttttcaagggtttcgcctggttccattc
ctcatagagctgcgtgccgtgatggactgggtctggaccgacaccaccctcagcctgggc
agttggatctgtgtcgaggacatttatgccaacatcttcatactcaagtgctggagggag
tcggagaagaaatacccacacatcccagggcagaagaagaaaatggtggtgaagtatgga
atgggtggcttcatcatattcttcctcatcagtgtcatctggttccccctcctcttcatg
tcattggtcaagtcagtggctggagtgaccaatcagcctctagatgtctctattcagctc
agcatcgcaggatatgagccaatgttcacaatgagtgcccaggagcagaacctggtgcca
tactcagttgcaggcctcaaccggctcaacaacctctatgccactcacccatcagctatg
cagttccttgggaactacatggccgaggacattgtcattgcaaagatcaagagtgatgcc
agtctgctgtggagcatcagtcctgccagccgtgacgctatgatccatgaactcagcaac
tccacccatatctacatcaccctgcgatgggtactactcaggaatgcgtctctgtcgatg
aacgtggagaccatgggggaacacactgtgaagtatgaggatcggaccctgagggatcag
atagttcagatgctcaaagggacacgcagtgactctgtgatcattgagtctctcctgccc
aagttcctcagaggttccggaggacctgtgtccaatatggccacccgtctgaaagtagaa
cactcggatcggcctgaggacctgcagacttttgccttcttcttgcccctgtccatcaaa
ctacagcgcgcagaagacaacagaagtgcagaggggggtcagtggtggatagtgcaggaa
tgcactcctggacaggggcacatccagagcagctgccacaagattgagatagtggtgttc
aacgacaaagtcagtccccccagcctggatgctcttgcgggacagggaatcgtgggcctg
tacatgtctgtggtgctggtcgtcgggaagtttgtcagggaattcttcaatgggatatcc
cgctcaattatgtttgaggagctgccgtgtgtggatcgggtgttgaagctctgcacggac
atctttgttgtgcgagagactggcgagatggagctggaggaaacactgtttgagaagctc
atcttcctgtatcgctcaccggagaccatgatcaagattaccagagagaagagcgactag
DBGET
integrated database retrieval system
