Oncorhynchus tshawytscha (Chinook salmon): 112215177
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Entry
112215177 CDS
T05605
Symbol
sclt1
Name
(RefSeq) sodium channel and clathrin linker 1 isoform X1
KO
K25400
sodium channel and clathrin linker 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112215177 (sclt1)
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
112215177 (sclt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Mce4_CUP1
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
112215177
NCBI-ProteinID:
XP_042173272
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MSTEVEFLRDQVQRLNSALSHYQDGHRSEATSAPQGEEETHTETPAPWLSDQSIMAPLLS
EYDRHMDDMTEQLQSYQMQMTAIRLKLDTVVKENERLHAELRESVERQLQTLPVSTGPGV
EGDTLGDEGLIGNLHQQIQLSVQERDQAMELWRASAQELDRLQQLYQITTSDGQLHVAEQ
QRLKDQLIQFQQHIQKLQVTNQKLESTNQQFLKTLTEQSTEMEELRNQLRSAKADLRMAT
AKVEEMTKLMQNVQDQIQRREDDAAEAHGREEASDRRLHHLQSALSQLEARLKAASQEAE
GVRREQVVWERQVGELQVRCASLEEERYEAFSKVRDSIQLAEEASLQKDQALLREKQKSE
ELDRMNEAVRQLIQDAAIRTRKEVENVRKQCNSQIHRMAEELSALQLECADKESQMERSM
REMRAVEEELEKVYKEGRGEPEYRKMEVLHQRSLNAERLKDDMNITLQSTHNKMKKLEMD
YSEELSRCQEEVRRLQGSLSAAREDCSGVSEERLQLQQENMQLRREMEELRKASLMTQRR
AKQQVSQMEQEYSLKEQGLEARVRELEESSRSSSADLTRLLSAQQKTSQRWKEEAKTLTL
TFQTKLTSLKGELSRQKQRCQELEIQLVTDHETIVEYERQMAEYQEKNSRLQRRLTQAEQ
KATTASQQLSIMTSQRRKTSSMADLESL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgaagtcgagtttttgcgtgatcaagtccaaaggctgaactctgccttgagt
cactatcaggatgggcaccgctctgaagccacatcagcaccacagggtgaagaggagaca
cacacagagaccccagccccctggctgtctgaccagagtataatggctcccctcctatca
gagtatgaccgtcacatggatgacatgactgaacaactgcagagctaccagatgcagatg
actgccatcagactgaagctggacacggtggtcaaggagaatgaacggctgcatgccgag
ctgagggagtccgtagagaggcagctgcagaccctcccagtcagtacaggaccaggggtg
gagggggacacactgggggacgaggggctcatcggcaaccttcaccaacagatccagctc
tctgtacaggagcgagaccaggccatggagctgtggcgggcctcagcccaggagctggac
cgtttacagcagctctaccagataaccacctctgacggacagctccatgttgccgagcaa
cagcgtctcaaggatcaactgatccaattccagcagcacatccagaaactacaagtcacc
aatcagaaactggaatctaccaaccagcagttcctgaagacgctaacagaacagagcacg
gagatggaggagctacgcaaccagctcagatcggccaaagcagatctgaggatggccaca
gccaaggtggaggagatgaccaagctgatgcagaacgtccaggaccagatacagagacgg
gaggacgatgcagcagaggctcatggtagagaggaggcctcagatcgaagactccaccat
ctccagtcagccctcagtcagctagaggccaggttgaaggcagccagccaggaggcagag
ggtgtacgccgggagcaggtggtgtgggagaggcaggtgggggagctgcaggtgcgctgt
gcctctctggaggaggagcgctacgaggccttctccaaggtcagagactccatccagctg
gctgaggaggcctctctacagaaggaccaggccctgttgagagagaaacagaaatctgag
gagcttgacaggatgaatgaagccgtcagacaactgatccaggatgctgccatacgcacc
aggaaagaggtagagaacgtacgtaaacagtgcaactcacagatccatcggatggctgag
gagttgtcggctctacaactggagtgtgcagataaagagtctcagatggagaggtccatg
agagagatgagggcagtggaggaggaactggagaaggtgtataaggagggtagaggagag
ccagagtacaggaagatggaggtcctccaccagaggtctctgaatgctgagagactgaag
gacgacatgaacatcaccctgcagagcacacacaacaagatgaagaaactggagatggac
tacagtgaggagttgtcccggtgccaggaggaggtgcggaggctgcaggggtctctgtct
gcagccagggaggactgcagcggggtcagcgaggagcggctccagctgcagcaggagaac
atgcagctccgcagggagatggaggagctacgcaaggctagcctgatgacccagaggaga
gctaagcagcaggtttcccagatggagcaggagtattccctaaaggagcagggtctggaa
gcccgggtcagggagctggaggaaagcagcaggagctccagtgctgacctgacccgcctc
ctctctgcccagcagaagaccagccagcgctggaaggaggaggccaagaccctcaccctg
accttccagaccaaactcaccagcctcaagggtgagctgagtcgacagaagcaacgttgt
caggaactggagatccagctggtgactgaccacgagaccatagtagagtacgagaggcag
atggcagagtatcaggagaagaacagtcgtctccagaggcgtttgactcaggcagaacag
aaggcaactacagcatcacaacagctgagtataatgacgtcacagaggaggaaaacatcg
tccatggcagacctggagtctctatag
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