Oncorhynchus tshawytscha (Chinook salmon): 112215182
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Entry
112215182 CDS
T05605
Symbol
sema3h
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H
KO
K06840
semaphorin 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
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Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_2
PSI
V-set
Ig_3
ig
Ig_6
I-set
Motif
Other DBs
NCBI-GeneID:
112215182
NCBI-ProteinID:
XP_042155237
UniProt:
A0A8C8K942
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Position
LG16:complement(50776925..50808815)
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AA seq
776 aa
AA seq
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MLGTLSVRVCETMWRITTLFLLAHLGRSLTGAWRASLPRLQFTHSELVQNGRLLYLPLAA
GDMHSLLPDEDGRRLYVAMKDNLLSTSLDDITQNPSKLYWPASPERVQECLMAGKDRELE
CANFLRVLQPYNQTHLYVCGTGAFNPRCAFIPTTVFLKSERQTLSFGQTECGKGKCPYDP
HQRTASAIIDGELYAGISSDFMSRDSAFFRSLGSRHVIRTEQYDSSWLQNAQFVKVAWMA
ETDNPEDDKVYVFFTERAQEAEGAAGKVLYSRVARVCKNDIGGQRSLVNKWSTFQKARIV
CSIPGSDGIQTHFDQLQDIFILHDGKDKKNPLIYGLFTTSSDILNGSAVCVYRMQDVVRA
YKGNFYHKEGPQYKWAEYTGKIPYPRPGTCPSSTYGSYSSTREYPDDVIFFSRTHPLLQE
AVLPLGGRPLLVRVGVHYKFSRLLVERVEAVDGQYDVLFIGTDSGQVLKSIHLPKEHGVP
QEVTLEQLQVFQHKSPVTTMTLSKKKQWLFVGSAEGVAQLALFQCELYGQACAECCLARD
PYCTWDGHACSPFMPIARRRNARQVGDEEDPLTQCVIQGAGLQVEAEQRMMMVAEGNSTY
LECLPKSRHAAVTWYKQAGENSPELNQLQSGELLVVTERGVLISRAETGHSGVYHCQLEE
HGFHWTAVTVHLSVWSPSRALSWSTSNRNPNSSPDASQPWYQDVMALIHPSSLEQHCQRL
GFRRRRNRGQDQTKDSDHKTGDGPRGERHKHGGRGGGGGGGRKSRSKPKQRSPRSS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggactttgagtgtgcgcgtgtgtgagaccatgtggaggatcacgaccttgttc
cttctagcccacctggggcgcagtctgacaggggcatggagagcctccctgccgcgcctg
cagttcactcactcagagctggtccagaatggccgtctcctatacctgcccctggcggcg
ggggacatgcactctctgctgccagatgaagatggccgtcggctctacgtggccatgaag
gacaacctgctgtccaccagcctggacgacatcacgcagaaccccagcaagctctactgg
ccagcaagtccagaacgggtgcaagagtgtttgatggctggaaaggaccgggagttggag
tgcgctaatttcctgcgagtgctgcagccctacaaccagacccacctgtatgtgtgtgga
acgggagccttcaaccctcgctgtgccttcatccctaccaccgtcttcctcaagtcggag
cgacaaactctatcatttggacagactgaatgcgggaagggaaagtgtccatatgatccc
caccagagaactgcctccgccattattgatggggagctgtatgctgggatctcatctgac
ttcatgagtcgagactcggccttcttccgcagcctgggcagtcgtcatgtgatccgcacc
gagcagtacgattcctcctggctgcagaatgcccagtttgttaaggtggcctggatggcg
gagactgataacccagaggatgataaggtgtacgtgttcttcactgagcgcgctcaggag
gcagagggggctgctgggaaggtgctgtactccagagtggcgcgtgtctgcaagaacgac
atcgggggccagcggagtctggtgaacaagtggagcaccttccagaaggcacgtatcgtg
tgctctatccctggatccgacgggatacagactcactttgaccaactacaggacatcttt
atcctccatgatggaaaggacaagaagaaccctctgatctacggcctcttcaccacatct
agtgacattctgaatggctcagcggtgtgtgtgtaccgcatgcaggacgtggtccgggca
tacaaaggaaatttctaccacaaagagggaccacaatacaagtgggccgagtacacagga
aagatcccctacccaagacctggcacatgtcccagcagcacatacggtagctacagctct
acccgggagtaccccgatgacgtcatcttcttcagccgtacccaccctctgctgcaggag
gcggtgcttccgctgggagggcgccccttgttggtcagggtgggagtgcactacaagttc
agccggctgctggtggaacgagtagaggcagtggatggacagtatgacgtcctgttcatc
ggcacagactccggccaggtgctgaagtctatccacctccctaaagaacacggtgtcccc
caggaggtcaccctggagcagctgcaggtcttccagcacaagtcacctgtgacgaccatg
acactgtccaagaaaaagcagtggctgtttgtgggttctgcagagggtgtggcccagttg
gctctgttccagtgtgagttgtacggccaggcctgcgctgagtgctgcctggccagagat
ccctactgcacctgggatggacacgcctgcagccccttcatgcccatcgcacgcaggagg
aacgctcgtcaggttggtgatgaggaggatcccctgacccagtgtgtcatacaaggagcc
ggtctgcaggtggaagcagaacagaggatgatgatggttgcagagggtaacagcacatac
ctggagtgcctgcccaaatccagacatgcggccgtgacctggtacaaacaggcaggagag
aacagccctgagctgaatcagttgcagtcgggagagctgctggtggtgacagagagaggt
gttctgatcagtcgggccgagacgggtcactctggtgtgtaccactgtcaactggaggag
cacggcttccactggaccgccgtcactgtgcatctgagtgtgtggagcccctcccgtgcc
ctctcctggtccaccagcaaccgcaaccccaactccagcccagacgcctcccaaccctgg
taccaggacgtcatggccctcatccaccccagcagcctggagcagcactgtcagaggctg
ggcttccggcgacgacgcaaccgcggccaggatcagaccaaggacagtgaccacaagaca
ggggatggccccaggggcgagaggcacaaacatggaggccgaggaggaggtggaggagga
gggaggaagagcaggagcaaacccaagcagaggtctccgcgaagctcttag
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