Oncorhynchus tshawytscha (Chinook salmon): 112215269
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Entry
112215269 CDS
T05605
Symbol
rerea
Name
(RefSeq) LOW QUALITY PROTEIN: arginine-glutamic acid dipeptide repeats protein
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112215269 (rerea)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
112215269 (rerea)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
BAH
GATA
ELM2
Myb_DNA-binding
DUF7952
DUF7573
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
112215269
NCBI-ProteinID:
XP_042155724
LinkDB
All DBs
Position
LG16:82459782..82728900
Genome browser
AA seq
1590 aa
AA seq
DB search
MTADKDKPDREKDRDRDRDRERDRERDRDRDKRDKASRESESSRPRRSCTLEGGAKNYAE
SEDEDNENRGGAGAVGGVNMGMGEESGKKGKKKMIKKKSRYERMENGEITSFITEDDVVY
RPGDCVYMESRRPNTPYFICSIQDFKLSKRDHLLLSVKWYYRQSEVPDSVYQHLVQDRNN
DNDSGRELVITDPVVKSRELFISDYVDTYHAAALRGKCNIAHFSDIFAAREFKARIDSFF
YILGYNPETRRLNSTQGEIRVGPSHQAKLPELQPFPSEAPGGLGQAVTENEELVWMPGVN
DCDLLMYLRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNTLHESSYDAGKALQRL
VKKPVPKLIEKCWSEDEVKRFIKGLRQYGKNFFKIRKELLPNKETGELITFYYYWKKTPE
AASSRAHRRHRRQPVFRRIKTRTASTPVNIPSRPPSSEFLDLSSASEDDLDSEDSEQELK
GYACRHCFTTTSKDWHHGGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEDE
DGLSGKHSMKTRRNRGSMSTLRSGRKKQTASPDGRASPTNEDLRSSGRTSPSAASTDSTD
SKTDPMKKPSKKIKEESPMKSAKRQREKGGASDTEDTDNRTSAKKSKTQELGRSDSPSEC
EGEGEGEGEGESSDGHSVNEECSSDAKDIDQDNRSSSPSIPSPRDGESDSDSSAQQQLLL
LQRQEREREREGQSQHPPVIQSCQPGTSGGRSTTPPLPSTSSSAPSLVPQVPPSSAPPTS
LPLPIPPSMPQQTGPLSLNQSGASIHPQRRPSPSPHSPQQGLSQVPPPGPPGSTQSLPST
FHGPLPHPSSMPHPLQTGPSHLPHHHSLPPQSFPLGPQSQVPPSPLPLSQSQQPSHRAHT
PPSQSSSSQGGSSNQPHREQPLHPAPSMSMPHIKPPPTTPIPHMPNRDPQSHKHGPPHLS
APPSPXMPSNLPPPPALKPLSSLSAHHPPPAHPPPLQLMPQGPGQQLQPPPAQPPVLTQS
QNLPLSEXERGSQHHPPPLPLSGPSPSSHPNTPQSPMFPPHPFAPVLPLSSSGCPPPSSS
SCLPAGLQPPSSSISMPLPASIGSACPGPSVPPVHIKEEPLDESEEPESPPPPPRSPSPE
PTVVNTPSHASQSARFYKHLDRGYNTCARTDFYFTPLAASKLAKKREEALERVKREAEQK
AREEKEREKEREREREREKEQERAVKASSSCHDGRMGDPQMGGSAHMRPPFDGPPTSIAA
VPPYIGPDTPALRTLSEYARPHVMSPTNRNHPFFVSLNPNDPLMAYHMPGLYNADPGMRE
RELREREMREREMRERELRERMKPGFEHKPPELEGMHPSANPMEHFARHGAISLPSMAGP
HPFASFHPGLNPLERERLALAAGPQLRPDMSYPERLAAERLHAERMAAVANDPIARLQMF
NITPHHHQHSHIHSHLHLHQQDSLHQGGGECLVCPPGSGGHPLVDPLAGGPHLARFPYPP
GAIPNPLLGQNPHEHEMLRHPVFGTPYPRDLPPQMSAAHQLQAMHAQSAELQRLAMEQQW
LHGHHHMHGGPLPGQEDYYSRLKKESDKQL
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggacaaagacaagccagacagggagaaggacagggacagagaccgagacagg
gagagggacagagagagggacagagaccgggacaagagggacaaagcatccagggagagc
gagagctcacgaccacgccgtagctgcacgctggagggcggagctaagaactacgcggag
agtgaggacgaggataacgagaacaggggaggggccggggcagtaggcggggtcaacatg
gggatgggggaggagtcagggaagaagggaaagaagaagatgatcaagaagaagtcgagg
tatgaacggatggagaacggagagatcacttccttcattactgaagacgatgttgtttac
agaccaggcgattgtgtatatatggagagccgcaggcccaacactccctacttcatatgt
agcattcaggattttaaactgagtaagcgagaccatctgttactcagtgttaaatggtac
taccgtcagtcagaggtcccagactcagtctaccaacacctggtgcaggatcgcaacaat
gataacgattctggccgggagctagtcatcacagaccccgtggtcaagagcagagaactc
ttcatctccgactatgtggacacataccatgctgctgccctcagggggaagtgtaacatt
gcccatttctccgacatctttgctgccagggagttcaaagctcgcatcgactcctttttc
tacatcctgggatacaacccagagaccaggcgactaaacagcacacaaggagagatcaga
gtggggccgagtcaccaagccaagcttcccgagctgcagcccttcccctccgaggccccg
gggggcctgggtcaggctgtgacagagaatgaggagctggtgtggatgccaggggtcaac
gactgtgacctgctcatgtacctcagggctgcaaggagcatggcggccttcgctgggatg
tgtgacggcggatctacagaagacggttgcctagcagcctcgcgagacgacaccacactc
aacgcactcaacacgcttcacgagagcagttacgatgcaggcaaggccctacagcgcctg
gtcaaaaagcctgttcccaaactcatagagaagtgctggtcagaagacgaagtgaagcgg
ttcattaaagggctcagacagtacggcaagaacttcttcaagattcgtaaagagctgcta
cccaacaaggaaacgggtgagttgataaccttctactactactggaagaagactcctgag
gcggcgtcgtccagggcccaccgtagacaccgtcgccagcctgtgttccggcgcatcaag
acacgtactgcctccacccccgtcaacatcccgtctagacccccctcctcagagttcttg
gacctgagttcagccagtgaagatgacctggacagtgaagacagtgagcaggagctgaag
ggttacgcctgcagacactgtttcaccaccacctctaaggactggcatcacgggggcaga
gagaacatcttgttgtgtacagactgtcgtatccactttaagaagtacggcgagctgccc
cccatcgagaagcccgtggacccacctccgtttatgttcaaacccgtcaaagaggatgag
gatggactcagcgggaaacatagcatgaagaccagacgcaacagaggatcgatgtcgacg
ctccgtagtggccggaagaagcagacagccagtcctgatggacgagcgtctccaaccaat
gaggacctgcggtctagtggccgtacctccccctctgcagcctccacagacagcactgac
agcaagacagaccccatgaagaaacccagcaagaagattaaggaggagtctcctatgaag
agtgccaaacgccagagagagaagggaggagcctcagacacagaggacacagacaacagg
acaagtgccaaaaagtccaagacccaggagctgggtcggtccgactcgccgtcagaatgc
gagggagagggcgaaggcgagggcgagggcgagagctccgatgggcacagcgtcaacgag
gagtgtagcagtgacgctaaagacatcgaccaggataaccgcagctcctcgccctccatc
cccagcccccgagacggggagagtgactcggactcctccgcccagcagcagctgctccta
ctgcagagacaagagagagagagggagagagaggggcagtcacagcaccctccggttatc
cagtcctgtcagccagggacctcgggtggccgttccaccacccctccattaccttccacg
tcctcctcagccccctcactggtcccccaggtcccaccctcctccgcaccccccacttct
cttccactgcctataccgccttccatgccccaacagaccggccccctctctctcaaccaa
tcaggggcatccatccacccacagcggcggccctccccctcgcctcattctccgcagcag
gggttgtctcaggttccacccccaggaccgccaggctccacccagtcgctaccgagcacg
ttccacggcccgctgccccacccatcatccatgccgcacccactacaaactggcccctct
cacctgccccaccaccactccctgccccctcagagcttcccattgggcccccagtctcag
gtcccgccctccccgctccctctcagtcaatcgcagcagccgtctcacagggcccacacg
ccccccagccaatcatcgtcgtcccagggtggctcgtccaatcagccgcaccgcgagcag
cccctacaccccgccccttccatgtccatgccccacatcaagccccctcccaccacaccc
atcccccacatgcccaaccgcgaccctcagtctcacaaacacgggcctccacacctctca
gcgcccccttcccccnagatgccctccaacctgccccctccacccgccctcaagcccctt
tcctccctgtccgcccaccaccctcctcctgcccaccctcctcccctccagctcatgccc
cagggcccaggccagcagctccagcctccaccagcccagccccctgtcctcacccagtcc
cagaatctccccctttcagagtgagagagaggcagccagcatcaccctcctcctcttccc
ctttctggaccatcaccgtcctcccaccccaacacaccccaaagtcccatgttccctcct
caccccttcgcccctgtcctgcccctctcctcctctggctgtcctcccccctcctcatcc
tcctgtctaccagcaggcctccagcccccctcttcctccatctccatgcccctcccagcc
tccatcggctccgcctgcccaggtccctccgtcccacctgtacacatcaaggaggaacct
ctcgacgaatcagaggagcccgagagccctccgccccctcctcggagcccctcccccgag
cctaccgtcgtcaacacgcccagccatgccagccaatcagcacggttctacaagcacctg
gaccgtgggtacaacacgtgtgctagaacagacttctactttactcctctggctgcttct
aaactggccaagaagagagaagaggcgctggagcgggtcaagagggaggctgagcagaaa
gcccgggaggagaaggagagggagaaggaacgagagagagaacgggaaagagagaaggaa
caggagagagctgtgaaagcctccagttcgtgtcacgacggccgtatgggtgacccccag
atgggtggctccgcccacatgcgtcctcccttcgatggcccccctacctccatcgccgcg
gtgcccccttacatcgggcccgacacgcccgccctgcgcaccctcagcgagtacgcccgc
ccccacgtcatgtccccgaccaataggaaccaccccttcttcgtctccctcaaccccaac
gaccccctgatggcctatcacatgcctggcctctacaacgccgacccgggcatgcgggag
cgcgagctgcgagagcgggagatgagggagagagagatgagggagagggagctgagagag
cggatgaagcctgggttcgaacacaaacccccagaactagaaggcatgcacccctcggcg
aaccccatggagcacttcgcccgacacggggccatctccttaccttccatggcgggacca
caccccttcgcttccttccacccaggtctcaaccccttggagagggagcgtttggcgttg
gccgcgggaccccagctcagaccagacatgagctacccggagcggctggcggcggagagg
ctgcacgccgagaggatggcggcggtggccaacgacccgatcgccaggcttcagatgttc
aacatcacgcctcatcaccaccagcactcccacatccactcacacctgcaccttcaccag
caggactccctgcaccaaggcggtggtgaatgtcttgtgtgccctccaggttcggggggg
caccccctcgtagaccccctggcaggaggcccccacctcgcccgcttcccctacccgccc
ggcgcaatccccaaccccctcctgggacagaacccacacgaacatgagatgctgcgacac
ccggtcttcggtactccgtacccccgggaccttcctccccagatgtccgcagcccaccag
ctccaggccatgcatgcccagtctgcagagctgcagcggctagctatggaacagcagtgg
ctgcatggacatcaccacatgcacggtggcccacttcctggccaagaggactattacagc
cggctgaagaaggaaagcgacaagcaactgtaa
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integrated database retrieval system
