Oncorhynchus tshawytscha (Chinook salmon): 112215533
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Entry
112215533 CDS
T05605
Symbol
arhgap29a
Name
(RefSeq) rho GTPase-activating protein 29 isoform X1
KO
K20644
Rho GTPase-activating protein 29
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112215533 (arhgap29a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112215533 (arhgap29a)
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112215533 (arhgap29a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
C1_1
LAT
Nop53
Motif
Other DBs
NCBI-GeneID:
112215533
NCBI-ProteinID:
XP_042154939
LinkDB
All DBs
Position
LG16:complement(23679106..23747564)
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AA seq
1457 aa
AA seq
DB search
MVWSSVGSEQYRAESQAGLQVQGKGATRPGQECMLAAVGMLRQSSGGGSSSGGSGGGGGT
SGGNKRLLGISRTSNSHFFPLFPGTGMGTSTGTTASTGSGTWGTGGRGAKSSSVSSGLDS
VDAPAPVGTTDPDYIMQLVNDVRKFADVLLHLKEAFHSKEHQDCLHQVVHERLGELLRVL
KAVISKHQTLNSVDILSAAGTVIAQVKGVNFKEVNEENKQKLFGEIYTSIDTLAFTFGNV
VSDFLMGDVENGSALGLPLTRRSRSFENLSVESAVSGPEKDDPSGPSPPARAEEVDGVDV
ALQRSEGGVESALLYAKAWSKYTKELLAWVDKRLSMDIECAKSYAKMAESAKTLASQQEF
MPFRDIYMSAFKNDIEYSQLLLHTAATLQTNKFMQPLLARKNELDKLRKEVKEQWQREQK
KMHEADSALRKARVLQAQRQEEYEKARVSTSRVEEEQLGAAKLEKRRRLEEEALQKADEA
RDHCKACLTDVGVKRVDLANTKCEILTQLRKLVFQCDLTLKAVTVNWFQLQQAQVVSLPV
NHQSLCESAKLYEPGQRYVGFVRSLPAQSVRPRVESYSFDATVSHCNNAGLPLAKRSLSS
THCSTHSSHGNLSQMSVTSGDFLGTDEVESPVNTRPAKISERRSNSSTDIQALRIQGPFR
PWGTGSQGGGMCSDSESAGGSSESRSMDSPTASPGDFKRRLPRTPSTGTMSSADDLDERE
PPSPSDNGLSEMLIETASSPGPFRNTQMSKAAQTHKLRKLRALSKCRECDSLVVFHGAEC
EECSLACHKKCLETLAIQCGHKKLQGRLHLFGVDFTQAARNNPDGIPFIIRKCTSEIENR
ALDIKGIYRVNGAKSRVEKLCQAFENGKDLVELSDLYPHDISNVLKLYLRQLPEPLILFR
FYNDFIGLAKESQNIIVDEVEASRVSPASLTPPQVSVELNRVLFKIKDLLRQLPPAHYKT
LQFLIQHLHRVTEQAEENKMTASNLGIIFGPTLIKPRQTDAEVSLSSLVDYPYQALIVEL
LIRHYQMIFDAPLSPLPRPQGPPGPSGEGSPLKGQDANPCLTPQEKEQLLSRHSKSLVDI
KEQSSKVYKRHSSVIPSTHLMDEVREGKPRPDGRDYAPVVDEDSEQLNGLLSGSVPEVQR
AEGERDRGERGLTRARHTTSRVHLRHPRSKLVSRPMSMPAERLLNPAHGVDERNARNTAD
LDSEDVTGSAGSIARDQSIEEVSEDEKPKSRASSHYRSTFIDTGTLRRTWDKQYKHYDIT
PRTAKIITNLPTADKEVEDSATSLSTSVPSSSSIYPNRPYTIAVRPGRTLKREENVCEYS
SVPTAFRPPRTLQPPPGTFYKPPSGSKDKVLGDAPQKKRAEAANSAEEEEQEDDDDEDEE
EEEEEMGLEVSVDEPSVDEDNMDEDTEAPQQAAGSSLSLPQSPSSSPEDLSDETKPVYQR
LRARRLQEFEHREAHFV
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggtctggagcagtgtgggatctgaacaatacagagcagagagccaggcaggactacag
gtgcaaggcaagggggctaccaggcctggacaggagtgcatgctggctgcggttgggatg
ttgaggcagagcagtggtggaggcagcagtagcggtggtagtggtggtggaggtggtacc
agcggagggaacaaacgattgctgggcatctcacgcacctccaactcccacttcttcccg
ttgttccctggcacgggcatgggcactagtacgggcaccacggcgagtaccggatcaggg
acttgggggacgggtggcagaggagccaagagcagctccgtcagctctggattggacagt
gtggatgctcctgcccctgtcggcaccaccgacccagactacatcatgcagctggtcaac
gatgtgcgcaagtttgccgacgtcttacttcacctcaaggaagcttttcactccaaagag
caccaggactgtcttcaccaggtagtccatgagcgtctgggggagctgctgcgcgtgttg
aaggccgtcatcagcaaacaccagaccctcaactctgtggacatcctcagtgctgcaggc
accgtcatcgcacaggtcaaaggtgttaacttcaaggaggtgaacgaggagaacaagcag
aagcttttcggagagatatacacttccatcgacacattggcattcacctttggcaatgta
gtgtctgacttccttatgggagatgtagagaatggatcagcgttggggctgcccctgact
cggagaagcaggtcgtttgagaacctttccgtggaatctgcagtatctggtccagagaaa
gatgatccgtcaggtccatcgccgccggcgagggcggaggaggtggatggtgtggacgtg
gcgctgcagcggagtgaaggcggggtggagtcagctctactatacgccaaggcctggtcc
aagtacaccaaggagctgctggcctgggtggacaaacgactcagtatggatatcgagtgt
gcgaagagctacgccaaaatggcagaatcagcgaagacactcgcaagtcaacaggagttc
atgccattccgggacatttacatgtcagcgttcaagaacgatattgagtacagccagctc
ctactgcatacagcagctacccttcaaaccaacaaattcatgcagcctctcctcgcacgg
aagaacgagctggacaaactgaggaaggaggtcaaggagcagtggcagagagaacagaag
aaaatgcatgaggcggacagtgccctgaggaaggcccgtgttctgcaagcccagagacag
gaggagtatgagaaggcccgggtgtccaccagccgagtagaggaggagcagctgggagca
gccaagctggagaagagacgaaggctggaggaggaggctctgcagaaggcggatgaggcc
agagaccactgcaaggcctgtctgacagatgtaggggtgaagagagtggacctggccaac
accaagtgtgagatcctcacccagttacgaaagctggtcttccagtgtgacctcactttg
aaagcggtgacagtgaattggttccagctccagcaggcccaggttgtgtctctacccgtc
aaccaccagtctctgtgtgagagcgccaagctgtacgagccgggtcagcgatacgttggc
ttcgtcaggagtcttcctgcccagtcagtcagacccagggtggagtcctactccttcgac
gccaccgtctcacactgtaacaacgcagggttgcccctcgccaagcggtcattgagtagc
acccactgcagtacccacagttcccacggtaacctgtcccagatgtcggtcacctctggg
gacttcctggggaccgacgaggtggagagcccggtcaacacacggcccgccaagatctct
gagagacggtccaacagcagcaccgacatccaagctctgaggatccagggcccgttccga
ccctggggaacgggtagccagggcggggggatgtgcagtgactcggaaagcgccggaggc
agcagcgagtccagatccatggactcccccactgccagcccaggtgacttcaagaggaga
ctacccagaaccccctccacggggaccatgtcgtcagctgatgacctggacgagagagag
ccgccctcgccatcagacaacggtctgagtgagatgctgatagagacagccagttcccca
ggtccgttccgtaacacccagatgtccaaggcagcccagacacacaagctgaggaagctg
agggccctgtccaagtgcagagaatgtgatagtctggtggtcttccatggggctgagtgt
gaggagtgctccctggcctgccataagaagtgtttggagacactggccatccagtgtggt
cataagaaactccagggtagactgcacctctttggtgttgacttcacccaggcagctagg
aacaacccagatggtattcctttcatcatcaggaagtgtacctcggagattgagaataga
gcgctggacatcaaggggatctatcgtgtgaatggggccaagtctcgtgtggagaagctc
tgtcaggcatttgagaatggcaaggacctggtggagctatctgacctttacccccatgac
atcagcaacgtgcttaaactttacctgagacagcttccagagcctctcatcctgttccgt
ttctacaacgacttcatcggcctggccaaggagagccagaacatcattgtggacgaggtg
gaggcatccagggtcagccccgcctccctgacccctccacaggtcagcgtggagctcaac
cgggtcctcttcaagatcaaagacctcctgagacagctgcctccggcccactacaagacc
ctgcagttcctcatccaacacctgcacagggtgaccgagcaggcggaggagaacaagatg
acagccagtaacctaggcatcatcttcggccccacgctcatcaaacctagacagacggac
gcggaggtatccctgtcctccctggtggactacccctaccaggcactcatcgtggagctc
ctcatcagacactatcagatgatctttgatgcccccctcagccctctgccacggccccag
ggcccaccaggcccctctggggagggctctcctctgaagggtcaggatgctaacccttgc
ctcacccctcaggagaaggagcagcttctcagcagacactccaagtctctagtagacatt
aaggagcagagctctaaagtgtataagcgtcattcctccgtaatcccctccacccattta
atggacgaggtcagagaggggaaacccaggcctgatgggagggactatgcacctgtagtg
gacgaggactcagagcaactgaacgggctcctgtctggcagcgtccctgaggtacagaga
gcagagggagagagggacaggggggagaggggtcttacccgggcccgccacaccacttcc
cgggtccacctccgccacccccgctccaagcttgtctcccgacccatgagcatgcctgcc
gaacgcctcctgaaccccgcccatggcgtggatgagaggaatgccaggaacaccgctgac
ctggacagcgaggacgttaccgggagcgccgggagcattgcgcgagaccagtcaattgag
gaggtgtcggaggacgagaagccaaagtcgagggcgagcagccactaccggagcacgttc
atcgacacggggacgttacgtaggacctgggacaaacagtacaagcattatgacatcacc
cccaggacagctaagatcattaccaacctgcctacagcagacaaagaggtggaggactcg
gccacaagcctctccacttctgtaccatcatcctcttccatctaccccaacagaccctac
accatcgcagtgaggccgggcaggactctgaaaagggaggagaacgtgtgcgagtacagc
tctgtgcccactgcgttcaggcccccccggactctacagccaccgcctggaaccttctac
aaacccccctcggggagcaaggacaaagtgttaggggacgcgccgcaaaagaagcgtgcc
gaggcagctaacagcgcagaggaggaagaacaggaggacgatgatgatgaagatgaggag
gaggaggaagaggagatgggtctggaggtctctgtagacgagccctctgtggatgaagac
aatatggatgaggacactgaggccccgcagcaggctgcaggctcctctctgtccctgccc
caatcccccagctccagccctgaggacctcagtgacgagaccaagcccgtgtaccagaga
ctacgggccagacgcttgcaggagttcgagcaccgcgaggcccattttgtatga
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