Oncorhynchus tshawytscha (Chinook salmon): 112215546
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Entry
112215546 CDS
T05605
Symbol
snx7
Name
(RefSeq) sorting nexin-7 isoform X1
KO
K17921
sorting nexin-7/30
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112215546 (snx7)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112215546 (snx7)
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Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
GrpE
Tmemb_cc2
PSMD12-CSN4_N
Motif
Other DBs
NCBI-GeneID:
112215546
NCBI-ProteinID:
XP_024230413
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Position
LG16:24518342..24555198
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AA seq
467 aa
AA seq
DB search
MSRTIDAVVSPTQTNTIPADISGQMLDLDEDDDLEVFSKDLTLADGNMFNASMPTSPGSM
VNQCKFEEDEESDSKDIFITVDNPESHVTAIETFITYRVLTKTTRSEFDNSEYEVRRRYQ
DFLWLKGKLEDAHSTLIVHPLPEKFVVKGMVERFNGDFIETRRKALHKFLNRIADHPILS
CSEDFKVFLSAQAWELTTYKKQGPGFLSRMGETVRAVANSVRGVKNRPEEFTAIQEYVED
FSNKIGSLDKVTQRIVKEQKEYLEELKEYGPTYTLWSGSEEELAEQLKGVAGCIERCCKE
TEEQVGHLSDTLVPVLHEYVLCAETLKAVLRRRDNIQAEFEAKNEALATKKVDRDAESSD
LGFVWGSLLGKNPEEARHQRQERLDGEIEELKEEIDKLEDRVEWANNALKGDWGRWQRSM
RGDLKSAFLSTAEKNVDYYEKCLAVWETFLLSQRTEPSEETDRDNTP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaactatcgacgctgttgtgtcccccacccaaacaaatacaatacctgccgac
atctccggacagatgttagatctagacgaggacgacgatttagaagttttcagcaaggat
ttgactcttgcagacgggaatatgttcaacgcctcaatgccgacatccccaggctccatg
gtcaaccagtgtaagtttgaggaggacgaggagagtgactctaaagacatcttcattaca
gtggacaacccagagagtcatgtgactgccattgagacctttatcacctacagagttctg
accaagaccacacggagtgagtttgacaactctgagtacgaagtccgcaggcgctaccaa
gacttcctctggctcaaagggaaactggaggatgcccactcaactctcattgttcatcct
ctgccagagaagtttgtggtgaaggggatggtggagaggttcaatggtgatttcatcgag
acgcggaggaaagctctccacaagttccttaatcgcattgctgatcaccccattctgtcc
tgcagcgaagacttcaaagtcttccttagtgctcaggcctgggagctgacaacttataag
aagcaaggaccggggttcctgagcaggatgggggaaactgtgcgagcagtggctaactca
gtcagaggggtgaagaaccggccagaggagttcaccgccatccaggagtacgtggaggat
ttcagcaacaagatcggctctctggacaaagtcacccagaggatcgtcaaagaacagaaa
gagtacctggaggagctaaaggagtacgggcccacctacaccctgtggtcgggctcggag
gaggagctggcagagcagttgaaaggtgtagccggctgtatagagaggtgctgtaaagag
acagaggaacaggtcggccatctctcagacaccctggtgcctgttttacacgagtatgtc
ctgtgtgctgagacactcaaggcagtattgagacggagggataacattcaggcggaattt
gaggccaagaatgaagctctggccaccaagaaagttgaccgcgatgcagagtctagtgat
ctaggttttgtgtgggggagcctgctgggtaaaaaccctgaagaagccagacatcagagg
caggagagacttgatggggagattgaagagctgaaggaggagattgataaactggaggac
cgtgtggaatgggccaacaacgctctgaagggggactggggccgatggcagaggagcatg
agaggagaccttaaatcagccttcctctccaccgcagagaagaacgtagactactacgag
aagtgtctggcagtgtgggagaccttccttctctcccagagaacagaacccagcgaggag
actgacagagacaacaccccctaa
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