Oncorhynchus tshawytscha (Chinook salmon): 112215602
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Entry
112215602 CDS
T05605
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112215602
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
112215602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_15
zf-H2C2_5
zf-met
zf-C2H2_6
Zn_SUZ12
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
112215602
NCBI-ProteinID:
XP_024230530
UniProt:
A0A8C8M7S2
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All DBs
Position
LG16:complement(33188612..33256400)
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AA seq
1215 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYSNVVKTPGSDSDDEDKLHIVEEDGSLADGADCDSNVP
SEDHNGDRSDEAREECGSDGEDDGRTDALVEEMLQQGDTAVIYPEAPEDEPRQGTPEASG
HDENGTPDAFSQLLTCPYCSRGYKRYTSLKEHIKLRHEKSEDNFSCSQCSYTFAYRTQLE
RHMTAHKAGRDQRHVTQSGGNRKFNCTECEKAFKYKHHLKEHLRIHSGEKPYECSNCKKR
FSHSGSYSSHISSKKCISVISAVNGRPRPSAKASQCPSPAMPASPSSTTRTQIWDKPLQE
QLPLNQIKSEPVDYEYKAMVLSPATPGGNGHGGGVLNGGAAGPLQGAVQAVMLPTMGLVS
PISINLADLQNILKVAVDGNMIRQMLENNAKAAGTGTGATGVPHQQLISAISLPIIGQDG
NATKIIINYSLDPSQTQLTAQNLKKEPQTLATMPGQPQAQPLAEVAIEPCSKAQQRLPED
LTLSRPPRSKEEKMEEENEKEEGEETTKTCLLCGDCPGGLDVLHALEHCKKASGLRINGD
KSESAIASLLSEGVGNQPKNLLSLLKAYFALNAEPTKEELSKISDSVSLPTDVVKKWFDK
MQSSQVSLGAPTPPSEEEGPLSESPGATVVSPKIRPEQDTEGPTMMQSGPAEATPAEVNG
SMRSPASPTPLNLTAGGPVPARPSSSDSTDGPLDLSLPKPTREEAAAAATYHASVYSHQD
EPLNLTKTCTTKKELPLASAAGHHVTSQPVSLYTASPQSANPISIMTTQLPSGTIYAITD
QGRAGMPCLRAVTTSNNQTILIPQLAYTYTTTATANSPAGTETQEKTTLQVNGIKEERQD
TSSEGVSTMEELNDSDSAPSRKKMRKTESGMYACDLCDKIFQKSSSLLRHKYEHTGKRPH
ECGICRKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKEALE
GSQGGIGEEVLEEEMESPVGLALGLGGEQQEQSDSRPTSSHLDSDERGSSTREDEEESEE
EGEEEDMETAAGEEVEGDPDRVLDMDDIQVVRIGDEGGDEEEEAEGEKEEDTGREEGESE
EEQGVERVVVGGEGEEGEEEEEGVVGVEVKEEQEEEEVTGEKADTRQEEVQENREKEEEH
GGEKEQVEEQVEEELSEKEETMDTEKVLTSEDKEESGSRAAEESEVMKENEGETNRNTVS
EDKNQTPTGEKGDPN
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaatccgaggaggaataacgta
accaactacagtaatgtggttaagacccctggctcagactcagatgatgaggacaagctt
cacatcgtggaggaggacgggagtctggcagacggggcagactgtgacagtaatgtgccc
agtgaagatcacaacggagaccgctcagatgaagcgagggaggagtgtggttcagacggg
gaggacgatggcaggacggacgctctggtggaagagatgctgcagcagggagacacagcc
gtcatttacccagaagccccggaggacgagccacgccaagggacccccgaggccagcgga
catgacgagaacggcactccggatgcgttctcccagctcctcacctgtccctactgctcc
cgcggctacaagcgttacacgtccctgaaggagcacatcaagctgcgccacgagaagagc
gaggacaacttcagctgctcccagtgcagctacacttttgcctaccgcacacagctggag
agacacatgacggcccacaaagctggtagagaccagaggcacgtgacgcagtcggggggc
aaccgcaaattcaactgcaccgaatgtgaaaaagcatttaagtacaagcaccacctgaag
gagcacctacgcatccacagcggagagaagccgtacgagtgctccaactgcaagaagcgt
ttctcccactcgggctcctacagttcccacatcagcagtaagaagtgcatcagcgtgatc
tcggcagtcaacggccgcccccggcccagcgccaaggcgtcccagtgcccgtccccagcc
atgcccgcctcgccctcctccaccacacgcacacagatctgggataaaccgttacaggag
caactacccctcaatcagatcaagagcgagccagtggactatgagtacaaggccatggtg
ttgtctccagcaacgccgggaggaaacggtcatggaggaggggtgttaaacgggggtgcc
gcgggccccctgcagggtgcggtgcaggctgtgatgctccccaccatgggtctggtttct
cccatcagcatcaacctggcagacctgcagaacatcttgaaggtggcggtggacggtaac
atgatcagacagatgttggagaacaatgccaaggcagcggggaccggcacaggggcaacg
ggtgttcctcaccagcagctcatctcagccatcagtctccccatcatcggtcaggatggc
aacgctaccaagatcatcatcaactacagcctcgatcccagccagacccagctcactgcc
cagaacctgaagaaggaacctcagactctggctacaatgccaggccagccccaggctcag
cccctggccgaggttgccatagagccctgcagcaaggcccagcagagactcccagaggac
ctgacactcagcaggccccccaggagcaaagaggagaagatggaagaggaaaacgagaag
gaggagggggaggagaccactaagacctgtctgctctgtggcgactgccccggtggtctg
gacgtgctccacgcactcgagcactgtaagaaggcctcaggcctcaggatcaatggggac
aaatcagagtcggccatcgcctcgttactgtccgagggggtcgggaaccagcccaagaac
ctcctgtccctcctcaaggcctacttcgccctaaatgctgagccaaccaaggaggagctc
agcaagatctcagattcagtcagcctgcccaccgacgtggtcaagaagtggttcgacaag
atgcagagcagtcaggtctcactaggagctccgacacctccgtctgaggaagagggaccc
ttgtctgagagtcctggggccacagttgtgtcccctaagataagaccagagcaggacaca
gagggtcccaccatgatgcagtccggcccagccgaggccactccggctgaggttaacggc
tccatgcgctccccagcctcccccacaccactaaacctgaccgccggggggcccgtccca
gccagaccctcctcctcggacagcactgatggccctctggacctgtcgctaccaaagccc
acccgagaggaggccgcagccgccgccacttaccacgcctctgtttactcccatcaggac
gaacccctgaacttgacgaagacttgcacaacaaagaaagaacttccgctcgccagcgcc
gctggccaccacgtgactagtcaacctgtgtccctgtacaccgccagcccacaaagtgcc
aaccccatcagtatcatgaccactcagctgcccagcgggaccatttatgccatcactgac
cagggccgtgcaggcatgccctgcctccgggcagttaccactagtaacaaccagactatc
ctcatcccacagctggcctatacctataccactacagctacagccaacagccctgcaggg
acagagacacaggagaagaccacactgcaagtcaacggcatcaaggaggagcgtcaggac
accagctcagagggcgtgtccaccatggaagagctgaacgactcagactccgccccttcc
aggaagaaaatgaggaaaacggagagtgggatgtacgcctgcgacctgtgtgacaagatc
ttccagaagagcagttctctgctccgacataaatacgaacacacaggcaagcgaccccac
gagtgcggtatctgcaggaaggccttcaaacacaagcaccacttgatagaacacatgcgt
ctccactctggggagaaaccctaccagtgtgacaagtgtggcaagcgcttctctcactcg
ggctcctactcccagcacatgaaccaccgctactcctattgcaagaaagaggcgctggaa
ggaagtcaaggaggtataggggaggaggtgctggaggaggagatggagagccctgtgggg
ttggccctgggcctcggaggggagcagcaggagcagtcagacagcaggcccacctcctcc
cacctggactctgacgagcgagggagcagcaccagggaggacgaggaggagagcgaggag
gagggggaggaggaggacatggagacagcggcaggggaggaggtggagggggatccggac
agagttctggatatggatgatatacaggtggtgcggataggagacgagggaggggacgag
gaggaagaggcggagggggagaaggaagaagacactggtcgagaggagggagagagtgag
gaagagcagggagtggagagagtagtggtcgggggtgaaggggaggaaggagaagaagaa
gaggagggggtagtgggggttgaagtaaaggaggagcaggaggaagaggaggttacaggg
gaaaaagcagacacaaggcaagaggaggtacaggagaacagggagaaagaggaggaacat
ggaggtgagaaggaacaggttgaggagcaggtggaggaggagctgtctgagaaggaagag
acaatggacacagagaaagtattgacctcggaggacaaggaagagtcagggtcgagggcg
gcggaggaaagtgaggtcatgaaagagaatgaaggtgaaacaaacaggaacactgtttca
gaagacaagaaccagacaccgacaggagagaaaggagatccgaattaa
DBGET
integrated database retrieval system
