Oncorhynchus tshawytscha (Chinook salmon): 112215604
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Entry
112215604 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 12 isoform X1
KO
K20636
Rho GTPase-activating protein 12/27
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112215604
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112215604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3-WW_linker
RhoGAP
WW
PH
SH3_1
SH3_9
SH3_10
Motif
Other DBs
NCBI-GeneID:
112215604
NCBI-ProteinID:
XP_024230532
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All DBs
Position
LG16:complement(33414100..33521457)
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AA seq
935 aa
AA seq
DB search
MLSTNRGQRSTRLEEVNTIMADRDGHGGGVDVPTIAPGQVYVEVEYDYEYTAKDKLISIR
QGECYMLVRKTNEDWWQVRKEEGMKAFYVPAQYVREVRRALMPPQKPLMSCGIGGVSGAF
RVKPTVLDICRASNENLNNRLPQEMSSFGRPSPSSTPSPFPVHVTLPALTKDANQNPGSP
RHSKPPGVAELVLLHNNNNHHHSNNSTLPRMRADSPPPRAPYNDHKHHQGSDDTEQTPSS
SGDSPGEGSETLRNDSESGDDLSSSSAEHMQTTSPAGQGRPESPVYTNLQELKISQSSLP
PLPSSSPLHVLGDWETHKDLTGRHFYYNRACGERTWKPPRVRDASCSTSSSRGDSHGTGE
MEPLSSEENCHSSTYSSQSDSQYGTPPRGWSEELDEHGHTLYVCEYTHEKWIKHVDEQGR
PYYYSADGSRSEWELPKYNLSPPQPGDPPKSRSLERKHPDPIVLTKWRHSTYVLDLNDKF
SFKKLRRFESSHHMGRSGRNLYRGKPSEKCGVLNVTKITENGKKVRKNWTSSWTVLQGSS
LLFAKGQGSGTSWPHYRSGSIPELLLTLLANWKRSVKPCPAVSYVHSVQGRAPAATKFVG
NQSKPEFTVDLRGGSVDWASKDKSSKKHVIELKTRQGTELLIQSEIDSVINDWYRALTDT
ISTHAWESDEAIEEDMPESPGAEKQDKEKDHRDSKKNRAMKTSISMDSTDQKKTRVKLKK
FLTRRPTYQAVKDKGYIKDQVFGCSLSSLCQRENTSVPNFVTTCIDHVETTGLSIDGIYR
VSGNLAVIQKLRFAVNHDEQLELEDSKWEDIHVTTGALKMFFRELPEPLFTYDSFNDFIN
AIKCSDYKQRVNSIKDLIKQLPKPNHDTMQCLFKHLRRVIDHGEANRMTTQSVAIVFGPT
LLRPETETGNIAVHMVYQNQIVELILLEYENIFGR
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcaccaatagaggtcaaaggtcgacacggttagaagaggtcaacaccatcatg
gctgacagagatgggcatggcggcggggtggatgtgcccaccatcgccccaggccaggtg
tacgtggaggtggagtacgactatgagtacacggccaaggacaagctgatctccatcagg
cagggggagtgctacatgctggtcaggaagaccaacgaggactggtggcaggtgaggaag
gaggaggggatgaaagccttctatgtcccagcacagtacgtcagggaagtgcgccgggcg
ctcatgccccctcagaagcctctcatgtcatgcgggattggtggggtgagtggggcgttc
cgtgtgaagcctacagttctggatatatgcagagcgtccaatgagaacctcaacaacagg
ctgcctcaggagatgtctagttttgggcgtccgtcgccctcctccacgccgtcgcccttt
ccggtgcacgtcaccctgcccgctctgaccaaggacgccaaccagaacccgggcagcccg
cggcacagcaagccccctggtgtagccgagctggtgctcctacacaacaacaataaccat
caccacagcaacaactccacgttaccacggatgcgggcggactctccgccccccagggcc
ccttacaacgaccataaacaccaccagggaagtgatgatacagaacagaccccctcctct
tctggcgactccccgggggaggggtcagagacgctccggaacgactcggagtctggagac
gacctaagtagcagctctgctgaacacatgcagacgacgtctccggcggggcagggccgg
cccgagtcccctgtctacaccaacctccaggagctgaagatctcccagtccagcctgccc
ccccttccttcaagctccccactgcatgtccttggggactgggagacccacaaggacctc
accggcagacacttctactataacagagcctgcggcgagcgcacgtggaaaccgccccgc
gtacgggatgcgagttgcagtaccagtagtagtcggggagactcccatggcacaggagag
atggagcccctgtcttccgaggagaactgtcacagcagcacctactccagtcagtcggac
agtcagtacggcacaccccctagaggctggtcagaggaactggacgaacacggacacacc
ctctatgtctgtgaatatactcatgagaagtggataaagcacgtggacgagcagggaagg
ccgtactactacagcgctgatgggtccaggtcagaatgggagctacccaaatacaacttg
tctcctccccagccaggcgatccccccaagagtcgtagtctggagcggaaacatccagac
cccatcgtcctgaccaagtggagacacagcacctacgtactagacctcaacgacaagttc
tctttcaaaaaactcaggcgctttgaatcgagccatcacatggggagatctggtcgcaat
ctttaccgtggtaaaccctctgagaagtgtggagtcctcaacgtcaccaaaatcactgag
aatggcaagaaagtcaggaagaactggacatcttcgtggacagtactccagggctcctca
ctgctcttcgctaaaggacaggggagtggcaccagctggccgcactaccgtagtggctcc
atccctgagctgctgctcactctgctggccaactggaagcgttcggtcaagccctgccca
gctgtctcctatgtccactctgtccaagggcgtgccccagctgccactaagtttgtgggt
aaccagtcgaagccggagttcactgtggatctcagaggggggtcagttgattgggcatcc
aaggataagtcaagcaagaagcacgtcattgaactgaagacccgtcaggggacggagctg
ctgatccaatcagagattgacagcgtcatcaacgactggtaccgagccctgacagacacc
atcagcacacatgcatgggagtcagatgaggccatagaggaggacatgcctgagtccccc
ggggcagagaaacaagacaaggagaaggaccaccgagactccaagaaaaacagagcgatg
aagacgtctataagtatggactccactgaccagaaaaagactagagtgaagctgaagaag
ttcctgacccgccgacccacctaccaggccgtcaaggacaagggatacattaaagaccag
gtgtttggctgcagtctgagcagcctgtgtcagagggagaacacgtcagtgcccaacttt
gtcaccacgtgcatcgaccacgtggagaccacaggtctgagtatagatggcatatacaga
gtgagtgggaatctagctgtgatacagaagctgcgcttcgctgtgaatcacgatgaacag
ttagaactggaggacagtaagtgggaggacatccacgtcaccacgggagccctgaagatg
ttcttcagagagctgcctgaaccactcttcacctacgactccttcaacgactttatcaac
gccatcaaatgctcggattacaagcagcgagtaaactcaataaaagacttaatcaagcag
ttgccaaaaccgaatcacgacacaatgcaatgcctcttcaaacatctcagaagggtgatt
gaccatggagaggccaaccgaatgacgacccagagcgtagcgatcgtcttcggccctacc
ctgctcagacctgaaaccgagactgggaacatcgctgttcacatggtatatcagaaccag
attgttgagctcatcttactggagtatgagaacatcttcggcaggtag
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