Oncorhynchus tshawytscha (Chinook salmon): 112215608
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Entry
112215608 CDS
T05605
Name
(RefSeq) cadherin-12-like
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112215608
Cell adhesion molecules [BR:
otw04515
]
Cadherins
Major cadherins
112215608
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Stevor
ASFV_J13L
RIFIN
Motif
Other DBs
NCBI-GeneID:
112215608
NCBI-ProteinID:
XP_024230540
LinkDB
All DBs
Position
LG16:complement(34614245..34821497)
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AA seq
813 aa
AA seq
DB search
MLTRNCLLLFLWFVFDKGSLSPVRPPGAPLSRGSLGKEHPRSLVGPMRNGASGFQRVKRG
WVWNQFFVLEEYMGSDPQYVGKLHTDLDKGESAVKYTLMGEGAGSIFTIDATTGDIHALR
SLDREVKPYYTLRAQAVDIDTNKPLEPESQFVIKVQDINDNEPKFLEGPYTASVPEMSPV
GTYVMQVTATDADDPTYGNSARVVYSILHGQPYFSVDPKTGIIRTALPNMDREVKEQYQV
LIQAKDMGGQLGGLAGTTTINITLSDVNDNPPRFSKSFFHLRVPESSAVGSAVGRIKAHD
LDIGKNAEVEYNIVPGDGGNMFDIITNEHNQEGILILKRPLDYETKKAYTFKVDAENAHL
DPRFHSFGAFKDTATVKINVLDVDEPPVFTKPSYEMEVYEDSPVGDIIGAVTGQDLDASN
SPVRYSIDWKSDLDSYFDIDPVEGTISTNELLDRESIAQHNITIVATKLNSPVLTSRVAV
TVHVLDVNEFPPELAIPYESFVCENTKVGQVIQIFSAKDQDLPQSGHKFSFKPSERDFNN
KNFTILDFGNNTAGIMTLRSDFRRRSQEIYFLPVVIQDSGYPVQSSTGILTIRVCGCESD
GSLLTCSAEAIFLPVGLSTGALIAILLCIVILLVIVVIYVGLRRQKKKETLMTSKEDIRD
NVIHYDDEGGGEEDTHAFDMGTLRNPKVIKENLLKENRDLLRRDVKPDPKTGKKRTPVSQ
DSEDIRDFINQRLKENDVDNSAPPYDSLATYAYEGEGSVAESLSSIESLVVDADEDYDYL
NIWGPRFKTLAGIFGEQSHTQADTTTTTTENRH
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaaggaactgcctgctactgttcctttggtttgtcttcgacaaaggctccctg
tctcctgtacgcccgccaggcgcaccgctgagcagggggagtctgggaaaggagcatccc
aggagcctggtgggcccgatgagaaatggggcatctgggtttcagagagtcaagaggggc
tgggtatggaaccagttctttgtgctggaggagtacatggggtcagacccacagtacgtg
ggcaagctgcacactgacctggataagggcgagagcgcagtgaagtacactctcatggga
gaaggggccggctccattttcaccatcgatgcaacgaccggggacatccatgccttaaga
agccttgacagggaggtgaagccttactatacccttcgcgcccaggctgtcgatatcgac
acaaacaagcccctggagcccgaatcacagtttgtgatcaaagtccaggacatcaacgac
aatgagccgaagtttctggaaggaccgtacacagctagtgtccctgagatgtcacctgta
gggacctatgtgatgcaggtgacagccacagatgcagatgaccctacctacggaaacagt
gccagggtggtctacagcatcctccatggccagccatacttctctgttgatcccaagaca
ggtataataaggacggccttgccgaacatggaccgcgaggtgaaggagcagtaccaggta
cttatccaggccaaggatatgggaggtcagctgggaggtctggctgggaccactaccatc
aacatcaccctcagtgacgtcaatgacaacccaccaaggttttccaaaagtttctttcat
ctgagagtcccagagtcctctgcagtgggttctgctgtgggaagaatcaaagctcatgac
ttggacattgggaagaacgcggaagtagagtacaacatcgtaccgggggacggaggcaac
atgtttgacatcatcaccaatgaacacaatcaggaaggaatcctcattctcaaaaggccg
ctggactacgaaacgaagaaggcctacaccttcaaggtagatgcagaaaacgcccacctg
gacccgcggttccacagcttcggggccttcaaggacacagccacagtgaagattaacgtc
ctggatgtagatgagcctccagtgttcactaagccctcttacgagatggaggtatacgag
gactcacctgtaggcgacatcatcggagctgtcaccggacaggatctggatgctagcaac
agccctgtcaggtattccattgactggaaaagtgacctggacagctactttgacattgat
ccagtggagggaacgatttccactaacgaactcctggacagagagagtatcgcccagcac
aatatcaccattgtggccaccaaacttaatagcccagtgctgaccagtagagtggctgtc
accgttcatgtactggatgtcaatgagtttccccctgaactagccatcccttatgagagc
tttgtgtgtgaaaataccaaagtaggccaggtaattcaaatcttcagtgcaaaggaccag
gatctgccacaaagtggtcataagttctccttcaaaccatcagagagggacttcaacaac
aagaacttcactattctagactttggaaataacacagcggggataatgactctgcggagc
gacttccgacggcgttcccaggagatctacttccttcctgtggtgatccaggacagcggc
taccccgtccaaagcagtacgggcatcctgaccatccgtgtgtgtggctgcgagtcggat
ggatcgctcctcacctgcagtgcagaggccatcttcctcccagtggggctgagtacaggg
gccctgatagccatactcctctgcattgtcattcttctggtgatcgtggtcatctacgta
ggtctgagacgacagaaaaagaaggagactctgatgacatccaaggaggacatccgtgac
aatgtaatccactacgacgatgagggagggggcgaagaggacacccacgctttcgacatg
ggcaccctccgcaaccccaaagtcattaaggagaaccttctgaaagagaaccgggacctt
ctccgacgggatgtcaaacccgaccccaaaaccggcaaaaaacgaactcctgtttcccaa
gacagtgaagatatccgtgacttcatcaatcagcgactgaaggaaaacgatgtggacaac
tcggccccaccctatgactctctagctacctatgcctatgagggagagggctctgtagca
gagtcgctcagctccatcgagtctctggtagtagatgccgatgaggactatgattacctc
aacatatggggtcctcgatttaagactctggcgggaatattcggagagcagtcgcatact
caagcagacacaacaacaacaacaacagaaaacagacattga
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