Oncorhynchus tshawytscha (Chinook salmon): 112215612
Help
Entry
112215612 CDS
T05605
Symbol
drosha
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112215612 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112215612 (drosha)
03009 Ribosome biogenesis [BR:
otw03009
]
112215612 (drosha)
03036 Chromosome and associated proteins [BR:
otw03036
]
112215612 (drosha)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
112215612 (drosha)
Messenger RNA biogenesis [BR:
otw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
112215612 (drosha)
Ribosome biogenesis [BR:
otw03009
]
Eukaryotic type
90S particles
RNase
112215612 (drosha)
Prokaryotic type
rRNA processing factors
112215612 (drosha)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
112215612 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
Motif
Other DBs
NCBI-GeneID:
112215612
NCBI-ProteinID:
XP_042155070
LinkDB
All DBs
Position
LG16:complement(36272509..36483130)
Genome browser
AA seq
1294 aa
AA seq
DB search
MMPSVPPPPFPHPPGMPPTMPPQSMSYHQPPYSMNYSHPPFPPLPNFSPGNYGSHQGPSS
FKPDHGGFRHSPHGGGGQQYKAEKQQQMDDRSQRSPERSRGGRHDDHRQQKGGYAYGSRG
GGDRHKMDFPMNQRGKDRGRSPDRRRPEGGRHRSEYEQRGRTPPTRHRSRERSRERHRHR
DSRRSQSPDRHRKRPRSRSGSRERKRGRWEEERDRRSDGPGMSRDRERSYTSARSRDTEP
EVSIDRDRDREREMERGERERGERERGERERERERGERERGEREKGEGDEREEDELLKPA
WIRCTHAENYYSSDPMDQVGDSTVVGTSKLRDLYERFEEELVKRQERAQSARPKWDPPKT
KLDEEPGTVLISDSIPKEECHSHSSSESDCESDGGGSTCSSSSDSDVFDVIAEIKRKKAH
PDRLHDELWYNDPGQMNDGPLCKCSAKSRRTGIRHSIYPGEESVKECRPMNNNSGKLYHY
RITVSPPTNFLTDRPTVIEYDDHEYLFEGFSLFSHMPLTNIPLCRVIRFNIDYTIHFIEE
MTPENYCVKGLELFSSYLFQDILELYDWNLTGPEWDNQSPGCQKFHFMPRFVRFLPDGGK
EVLSMHQVLLYLLRSSKPLVPEEEIADMLQWEELKWQKYAEECKGMIVTNPGMKPSSVRI
DQLDREQFNPEVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQID
KQKLTQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDLCQHAMMLPVLTHHIRYHQ
CLKHLDDLIGYVFKERCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHH
MYMRKKGINTLINIMSRLGQDDPSPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEG
GLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLE
GGLEESKQLFGRLLFNGEDLREVWLNYPPHPLQVQEPQTDRQLIETSPVLQKLTDFEDTI
GVMFTHCRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHL
TLLRSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDL
EYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSH
ARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKWPLSIMADPCCDSILQSCLRGVG
YTQNTFPLHTTHLYRLHTCICVKQDRYRQTLFYL
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgatgccctccgtaccccctccacccttccctcacccccccggcatgcctcctaccatg
cctccacagtccatgagctaccatcaacccccctactccatgaactactcccatcctcca
ttccctcctctgcccaactttagcccagggaactacggctcccaccagggtcccagctcc
ttcaagccagaccatgggggcttcaggcacagtcctcatggaggaggagggcagcagtat
aaggctgagaagcaacagcaaatggacgacaggagtcagaggtcaccggagagaagcaga
gggggtcgccatgacgaccacaggcagcagaagggtggctatgcttacggcagtcgtggt
ggtggcgacagacacaagatggacttccccatgaaccagagagggaaggaccgaggcagg
agtccggacagacgcaggccggagggagggagacatcggtcagagtatgaacagcgtggg
aggactcctcctacccgtcaccggagtcgagaacgcagcagggagaggcatcgccacaga
gacagtcggaggtctcagtcacctgaccgacacaggaagcgacctagaagtcggtcaggc
agcagagagaggaagcgtggtcgctgggaggaggagagggaccggaggtccgacggaccg
gggatgagcagagacagagagcgcagctatacctccgccaggagccgagacacagagcct
gaagtctccatagatagagacagagaccgggagagagagatggagaggggcgagagggag
aggggcgagagggagaggggcgagagggagagggagagggagagaggtgagagggagaga
ggcgagagggagaaaggggagggagatgagagagaggaggatgagttgctgaagcctgcg
tggatccgctgtacccatgctgagaactactactccagcgatcccatggatcaagtgggt
gattctacagtggtggggaccagtaagctgagggacctgtacgaacgcttcgaggaagag
ctggtcaagagacaggagcgtgctcagtcggcccggcccaaatgggaccctcccaagacc
aagctagatgaggagcccggtactgtattgatatcagatagtatccccaaagaggagtgc
cacagtcacagcagcagtgagtcagactgcgagtctgacgggggaggcagtacctgctcc
agcagctctgactctgacgtgtttgacgtgatcgctgagatcaagaggaagaaggcccat
ccagaccgtctgcatgacgagctgtggtacaacgacccaggacagatgaacgatgggccg
ttgtgtaagtgcagtgccaagtccagacgcacagggatacgccacagcatctaccctgga
gaggagtcggtgaaggaatgtcgtccgatgaacaacaactctgggaagctctaccactac
agaatcactgtgtctccacctactaacttcctgacagacaggcctacggttatcgagtac
gatgaccatgagtacctgttcgaaggcttctccctcttctcccacatgcctctcactaac
attccattgtgcagagtgattcgtttcaacatagattacaccattcactttattgaagag
atgacaccagagaactactgtgtgaaaggactggagctgttctcttcctacctattccag
gatatactggagctctatgactggaacctcacaggtccagagtgggacaaccaatctcct
ggatgtcagaagttccacttcatgcctcgctttgtccgcttcttacctgacggtggtaag
gaggtgctctccatgcaccaggttctcctctacctcctgcggagctccaagcctctggtc
cctgaggaggagatagctgacatgctgcagtgggaggaactgaagtggcagaagtacgca
gaggagtgcaagggcatgatcgtcactaaccctggcatgaagcctagctctgtgcgtatt
gaccagctggacagagagcagttcaatccagaggtcatcaccttccccatcatcgtccac
ttcgggatccggcccgcccagctcagctacgctggagacccccagtaccagaagctgtgg
aagagctatgtgaaactacgccacctgctggctaacagccccaaggtcaagcagatagac
aagcagaagctaacacagagggaggaagcccttcagaagatccgccagaagaacaccatg
cgccgggaggtgaccgtggagctcagcagccagggcttctggaagactggcatccgctct
gacctctgtcagcatgctatgatgttgccagtgttgacccaccacatccgctaccaccag
tgtctgaagcacctggacgacctgattggctacgtcttcaaggagcgctgtctgttacag
ttggccatgactcaccccagccaccacctgaactttggcatgaacccggaccacgcccgt
aactccctgtccaactgcggcatccgccagcccaagtatggggacagaaaggtccaccac
atgtacatgaggaagaagggaatcaacaccttgatcaacatcatgtctcgtcttggacaa
gatgatccctccccctccaggatcaatcacaacgagcggctagagtttctcggcgacgcc
gtcgtggagtttctcaccagtgttcatctgtactacctgttccccagtctggaggaagga
gggctcgccacctacagaacggccattgtacagaaccagcacctggccatgctagcaaag
aaactggagttggatcgcttcatgctgtatgcccacggcccagacctctgtagggagtca
gacctgagacatgccatggccaactgctttgaagcactcataggagctgtatatttggag
ggcggtctggaggagtctaagcagctgtttgggaggctgcttttcaacggagaggacctc
cgagaagtgtggctcaactacccgccccatcctctgcaggtgcaggagccgcagacggac
aggcagctgatcgagacatctccggtgcttcagaagctgacagactttgaggacaccatc
ggtgttatgttcacacactgtcgcctgctggccagagctttcacactgaggaccgtgggc
ttcaaccacctcacactgggccacaaccagaggatggagttccttggagactccatcatg
cagctggtggctacagagtacctcttcatccatttccccgaccaccacgaaggacactta
acactgttgcgtagctccttggtcaacaaccgtacccaggccaaagttgcagaggagctg
ggcatgcaggagtttgcgatcactaacgacaaaactaaacggccagtggccctccggacc
aagacccttgctgacctgctggaatctttcatcgcggcactctacatcgataaggatctg
gagtacgttcacaccttcatgaacgtctgcttcttccctcgactgaaggagtttatccta
aaccaggattggaacgatcctaaatcccagctccaacagtgctgcctgaccctgcgcacg
gagggcaaggagcccgacatacccctctacaagaccctgcagacagtggggccgtctcac
gcgcgaacctacactgtggctgtgtacttcaaaggagagaggataggctgtggcaagggc
ccaagtatccaacaggcggagatgggagctgctatggacgcactcgagaaatggccactg
tcaataatggctgatccctgctgtgactccattctccaaagttgtctcaggggagtggga
tatacacaaaatacatttccacttcataccacacacttgtacaggttacacacttgtata
tgtgtgaaacaggacagatataggcagaccctattttacctttag
DBGET
integrated database retrieval system
