Oncorhynchus tshawytscha (Chinook salmon): 112215620
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Entry
112215620 CDS
T05605
Symbol
fars2
Name
(RefSeq) phenylalanine--tRNA ligase, mitochondrial isoform X1
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112215620 (fars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
otw01007
]
112215620 (fars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112215620 (fars2)
Enzymes [BR:
otw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
112215620 (fars2)
Amino acid related enzymes [BR:
otw01007
]
Aminoacyl-tRNA synthetase
Class II (U)
112215620 (fars2)
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112215620 (fars2)
Prokaryotic type
112215620 (fars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
FDX-ACB
tRNA-synt_2
Motif
Other DBs
NCBI-GeneID:
112215620
NCBI-ProteinID:
XP_024230563
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All DBs
Position
LG16:37728328..37846329
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AA seq
515 aa
AA seq
DB search
MSGTGSRKDSGQWVTRTETQLYPLPRSSHPTDREPKVFRTIHPGEVHGAGTMRLHCRSLP
LFLPILKPLAHHKPLFCLPANGRPTTAPRLFPSPCHLTTDVPSSQPLVGQDTMVKVMGYS
YPRDDFTNVTSKILAKVGCNLHNQAHHPIWLIKERIKAHFYRAYIMRSGNPLFSVHDNLS
PVVTTEQNFDSLLIPPDHPSRKRGDNYYLNRGTMLRAHTSAHQRELVCSGLDAFLLAGDV
YRRDEIDASHYPVFHQMEGVRLFSNHELFAKVSSGEDLSLFESGGHRTPQKQETHTLEAV
KLVEFDLKQTLNRMVRHLFGEELEIRWVECYFPFTHPSFEMEVRFQEDWLEVLGCGVMEQ
ELVHSAGVSNKMGWAFGLGLERLAMVLYGIPDIRLFWSQDDRFLKQFCLPSINDPVTFQP
LSKYPPLINDISFWLPAEGYTENDFYDLVRSIGGDLVEKVTLVDQFKHPKTQKHSHCYRI
TYRHMERTLTQEEVRVLHAAIEHTAEQELGVKGRY
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaacaggtagccggaaggattcaggccagtgggtgaccagaactgaaacacaa
ctataccctcttcctcgctcctctcatcccacagatcgtgagcccaaagtcttccgtacc
attcaccctggagaggtccatggagcaggtaccatgaggctgcactgcaggagccttccc
ctcttcctccctatcctcaagcccctagcacatcataagccgctcttctgcctcccagcc
aatggcaggccaaccacagcccccagactcttcccctccccctgtcacctgaccactgat
gtcccctcctctcagcccctggttggccaagatacaatggtcaaagttatgggctactcc
taccctcgtgatgactttaccaacgtgaccagcaagatcctggccaaggtgggctgcaac
ctgcacaaccaagcccaccatcctatctggctcatcaaagagcgaatcaaagcccacttc
taccgtgcctacatcatgcgctctggcaacccgcttttctcggtccatgacaacctcagt
ccggtggtgactacggagcagaactttgacagcctgctcatcccgcccgaccaccccagc
cggaagcgaggcgacaactactacctcaaccggggcaccatgctgcgagctcacacgtcc
gcccaccagagggagctggtgtgctcggggctggacgccttcctgctggcgggtgacgtg
tacagaagggacgagatcgacgccagccactaccctgtgttccatcagatggagggggta
cgcctcttctccaaccacgagttgtttgccaaggtatcgagtggagaggacctgtctctc
tttgagagcggggggcaccggacccctcagaagcaggagacacacacactggaggcggtt
aagcttgtggagtttgatctgaaacagaccctcaaccgtatggtcagacacctgtttgga
gaagagctggagatccgctgggtggagtgttacttcccctttacccatccctcctttgag
atggaggtgcgtttccaggaggactggctggaggtgttgggctgtggagtaatggagcag
gagctggtgcactctgcgggagtgagtaacaagatgggctgggcatttggactgggcctg
gagcgcctggccatggtgctgtacgggatccctgacatccgcctcttctggagccaggac
gaccgcttcctgaagcagttttgcctgcccagcatcaatgacccagtcaccttccaaccc
ctcagtaagtacccacctctgatcaacgacatctccttctggctaccggccgagggctac
acagagaacgacttctatgacctggtgaggagcatcggaggagacctggtggagaaggtc
accctggttgaccagttcaaacatccaaagacgcagaagcacagccactgttaccgcatc
acctaccgccacatggagaggaccctgacccaggaggaggtgcgtgttctccacgccgcc
atcgagcacaccgccgagcaggaactgggcgtgaaggggaggtactga
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