Oncorhynchus tshawytscha (Chinook salmon): 112215629
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Entry
112215629 CDS
T05605
Name
(RefSeq) RNA-binding protein Musashi homolog 1
KO
K14411
RNA-binding protein Musashi
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112215629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112215629
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112215629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
112215629
NCBI-ProteinID:
XP_024230581
LinkDB
All DBs
Position
LG02:complement(39525669..39548950)
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AA seq
348 aa
AA seq
DB search
MDTEGSQISLSSVDNSPHDPCKMFIGGLSWQTTQEGLNEYFCKFGEVKECMVMRDPVTKR
SRGFGFVTYIDQAGVDKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVN
TTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDMVEKVCEIHFHEINNKMV
ECKKAQPKEVMSPTGTARGRARVMPYGMDAFMLGIGMLGYPGFQAATYASRGYPSITPGY
TYQFPEFHLERTTLLTSSHPSELTAIPLSAYGPMAAAAAAAMRGSTQSRNAGYLGTSSPG
PMADLYAAASQDSALSSYLSAASPGPNSGFGHGLGGPLIATAFTNGYH
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatacagaagggagccaaatcagcctgtcctccgtggacaactccccccacgacccc
tgcaaaatgttcatcgggggtctcagttggcagacaacacaagagggattgaatgaatac
ttctgtaaattcggcgaggtgaaggagtgtatggtgatgcgagatcccgttacgaagaga
tcgaggggattcgggtttgtaacatacatagaccaggctggtgtggataaagttttggca
caaaacagacatgagctggattctaaaacaattgatcccaaggtggcatttcctcgtaga
gcccaacccaagttggtgaccaggacaaagaagatctttgtgggaggcctctcagtaaac
acaacgatcgaagacgtcaagcaatacttcgaccagtttggaaaggtcgatgacgccatg
ctcatgttcgacaaaaccaccaacaggcacagaggtttcggctttgtgaccttcgagaat
gaagacatggtggagaaagtgtgtgagatccatttccacgaaatcaacaacaaaatggtg
gagtgcaagaaagcccagcccaaggaagtgatgtcaccgacgggtacggctcgaggtcgt
gccagggtgatgccctacggcatggacgccttcatgctggggatcggcatgctgggctac
ccaggcttccaagcagctacgtacgctagccgtggctaccctagcatcacgcctggatac
acctaccagttccctgaattccatttagagaggaccacccttctgacatcatcccacccc
tctgagctcacagccattccactgtcagcctacggaccaatggcagcagcagcagcagcg
gctatgagaggttccacacagtcacgtaacgcaggctacctgggcaccagcagccctggg
ccaatggctgatctgtatgcagcagccagtcaggactcagcactcagcagctatctcagc
gcagccagtcccggccccaactcaggattcggccacggtcttgggggtcctcttatcgct
actgccttcaccaacggttaccactga
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