Oncorhynchus tshawytscha (Chinook salmon): 112215686
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Entry
112215686 CDS
T05605
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112215686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112215686
03036 Chromosome and associated proteins [BR:
otw03036
]
112215686
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112215686
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112215686
PBAF complex
112215686
GBAF(ncBAF) complex
112215686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
112215686
NCBI-ProteinID:
XP_024230699
LinkDB
All DBs
Position
LG16:42007181..42116619
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AA seq
524 aa
AA seq
DB search
MPSGARMPHQGAPMGPPGPPYSGSPTVRPGLPTPVMEPSRKRPAPSQQNQQQQNVQNRAR
KKPVGFPGANEMPARQMDMRDAQSDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLL
AFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDADDSDGSIASWELRV
EGKLLDDPGKLKRKFSSFFKSLVIELDKDLYGPDNHLVELLTSKAKRFSLPKDNILKGSR
ARLLVESWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQ
TRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDP
IVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEIASLDNKVGQPHRK
DSQSQLPKMTLKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKMMTDVVG
NPEEERRAAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgccatctggagctaggatgccccaccagggtgcccccatgggcccccccggccccccg
tacagtgggagccctacggtgcggcccggcctgcccaccccggtcatggagcccagccgc
aagagacctgccccctctcagcagaaccagcagcagcagaacgtacagaaccgggccaga
aagaagccagtgggattccctggagccaatgagatgccagcgaggcagatggacatgaga
gatgcccaatcagatccaaccctcggatcaaacgccaagagaaggaaaatggcagacaag
attctcccacagaggatccgtgagctggtccctgagtcacaggcttacatggacctgctg
gccttcgaacgtaaactggaccagaccatcatgcgtaaacgggtggacatccaggaagcc
ctgaagagacccatgaagcaaaagcgtaaactgaggctctacatctccaacaccttcaac
cctgccaagcccgacgctgacgactcggatggcagtattgcatcatgggagctgcgggtt
gaggggaagctactggatgatcctgggaagctgaagaggaaattctcctcgttcttcaag
agcctggtgattgagctggacaaagacctatacggtcctgacaaccaccttgtagagctg
ctgaccagtaaagcgaagcgattcagccttccaaaagacaacatactcaaagggtcgaga
gcaaggctgctcgttgaaagttggcaccgcactcccaccacccaggagacggacggcttc
caggtgaagcggccaggggacgtgagcgtgcgctgcacactgctgctaatgctggactac
cagcccccccagtttaaactggaccctcgtctggctcggctgctgggtatccacacccag
acccgctcctgtatcatccaggccctgtggcagtatgtcaagaccaacaagctgcaggac
tcccatgacaaggagtacatcaactgtgacaagtactttcagcagatctttgactgcccg
aggctcaagttctcggagatcccccagcgtctcaccaacctcctcctgccccctgacccc
atcgtcatcaaccacgtcatcagtgtggaccctaatgaccagaagaagacggcatgctat
gacattgacgtggaggtggaggaccccctgaagagccagatgagcagcttcctgctctcc
accgccaaccagcaggagatcgcctcattggacaacaaggtgggacaaccacacaggaag
gatagccaatcacaattacccaagatgaccttaaagatccatgagaccattgagtccatc
aaccagttgaagatccagagggactttatgctcagcttctccagggatcctaaaggctac
atccaggactggctcaagtcccagagcagagacctgaagatgatgacggacgtggtgggg
aacccagaggaggagaggagggcggcgttttaccacgagccctggtcccaggaggccgtc
agtcgctacttctactgcaagatccagcagaggagacaggagctggagcaggccttggcc
gtgaggaacacctaa
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