Oncorhynchus tshawytscha (Chinook salmon): 112215709
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Entry
112215709 CDS
T05605
Name
(RefSeq) uncharacterized protein LOC112215709 isoform X1
KO
K03260
translation initiation factor 4G
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112215709
03012 Translation factors [BR:
otw03012
]
112215709
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112215709
mRNA cycle factors
Stress granule specific factors
112215709
Translation factors [BR:
otw03012
]
Eukaryotic type
Initiation factors
eIF-4
112215709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-RING_UBOX
zf-C3HC4
INTS7_N
DinI
Motif
Other DBs
NCBI-GeneID:
112215709
NCBI-ProteinID:
XP_024230776
UniProt:
A0A8C8IBX0
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Position
LG16:complement(43190342..43212956)
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AA seq
893 aa
AA seq
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MYRIRCSRVAETIELLNKKKLNCLICVGLLDPLSIPCGQSYCKVCIGNWVQDHQNDPYHI
CLKCRQTYTPRPALYTNTNLDEVVEKIEKTGLQADDTGSGNIVIYSKSYTEEILRKHTEE
ILRKHMLRNQHLVSMNKKKMSGSKTRKQEAQSPAPSSSRQDLEFQDPEPGKTQELYAQMD
DILDRVTQNNFQQSMNAITEFTINTEGKLRAITDLIYERAISHPASSVVYANMCHYLMGL
KVPMAAVPGVTLNFRKILLNRVKTDFENMGRDSHEISQKKMDAITKEEDGQQLREELEEV
KAKGRRQSLGNIQFMCELYKLKMITEAIMHDTIVKLLKNHDEDSLECLCTLLSTIGKELA
RPRMDEYCNQIEKIVKNRTTSPRITSMLQNVMDPRKTEIPQLAEKMEKIRLQADDDADDH
TGPAETEPVLRPHYKSSPMKQQELVSIFTPLQENVCPHDDKLKAEDHETDSAGRATKKKK
VSVPFKTCQQIIQEREEELQKLRQEVESLKCLSQATLEDGERFFTKLIETRCSEVREWIQ
AKEKEMVSEAEGLIQTLEKELDELKMTETEARQLPHIEDVPHFFQKLPSIIEAFGKVKRI
YATKIQKLFENTSKRQFKMFYEIVEEMLEPYTITSIDRQEVEEKDLEDFVDLDTVKTEEI
YAQMDDILDRLTPKNFHQSMKVVSAFTIDTEDKLKGFIDRIYKNAIEYPTYADVYAKVCH
HHQLMGLKVPGVTVPFRKLLLNRCQKGFEKDNSKILKDMQRELDAITEKEDRQRLSEGLE
ETKAEGQRELLCNIKFMCELFKLKMIMETVMHNCIVKLLKNGDDGSLEGLCTLLFTIGKD
LEEDSQEAEPRMDQHYKQIVVIIKKKRTSPRIRYMLCDAMDLRELNLEKNKDN
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgaattcgctgtagtagggtggctgaaactatagaacttttgaataaaaaaaag
ttaaattgtctaatctgtgtaggtttactggatccgctgagtattccctgtggacagagt
tactgtaaagtgtgtattggtaactgggttcaggatcaccaaaatgatccctaccacatc
tgccttaagtgcagacagacctacaccccaagacctgcgctatatacaaacaccaatctt
gatgaagtggtggaaaaaatagaaaagactggactgcaagctgatgacactggatctgga
aacatagtcatatactccaagtcatatactgaggaaatactgaggaaacatactgaggag
atactccgcaaacatatgctgagaaatcagcacctggtcagcatgaacaagaaaaagatg
agtgggagcaagacacgcaaacaagaagcccagtcaccagctccctcttccagcagacag
gacttggagtttcaggatccagagccagggaagacacaggaactgtatgcccaaatggat
gacatcctggatagggtgactcaaaacaacttccagcaatcaatgaatgcaataactgag
ttcaccattaacacagagggcaaactgagggccatcactgacctcatatatgagagggcc
atatcacaccctgccagctctgtggtctatgccaacatgtgccactacctcatggggctc
aaagtacccatggctgccgtaccaggagtgacattaaatttccgcaagatacttctgaac
cgagtcaagacagactttgagaacatggggagggacagtcatgaaatctcgcagaagaag
atggacgccatcaccaaggaggaggacggccagcaactgagggaagagctggaggaggtc
aaggccaagggtcggaggcagtctctaggcaatatccagttcatgtgcgagttgtacaag
ttgaagatgattacggaggccatcatgcacgacaccatcgtaaagctgttgaagaaccac
gacgaggattcgctggagtgtttgtgcaccttactctccaccatcggcaaggaattggcc
aggcccagaatggatgagtactgtaaccagattgagaagattgtgaagaataggacaacc
tcccccagaatcacaagcatgctgcaaaatgtgatggatccccgaaagaccgaaataccc
cagcttgctgaaaagatggagaagatcagactgcaagctgacgatgatgctgacgatcac
actggacctgcagaaacggaacctgttttgcggcctcattataagtcatcacccatgaag
caacaggagctggttagcatatttacaccactacaggagaacgtatgtcctcatgatgat
aagctgaaagctgaagaccatgagacagactctgcagggcgggctaccaagaagaaaaag
gttagtgtgccctttaaaacatgccagcagataatccaggagagagaggaggagctacag
aaactgagacaggaagtggagtctctaaagtgcttatctcaggctacactggaggacggt
gagaggtttttcaccaaattgattgagacaaggtgctcagaggtgagagagtggatccaa
gccaaagagaaggagatggtgagtgaggctgagggactcatacagacactcgagaaggag
ctcgatgagctgaagatgactgaaacagaggctaggcagcttccacacatagaggacgtc
cctcatttcttccagaaattgcccagcatcattgaggcttttggaaaagtgaagaggata
tatgccactaaaatccaaaagctatttgaaaatacctccaagagacaatttaagatgttt
tatgaaatagttgaagaaatgctggaaccatacaccatcacttctattgacagacaggag
gtggaagaaaaggacctggaggactttgtggacctagatacagtgaagacagaggaaata
tatgcacaaatggatgacatcctggacaggctgactcctaagaacttccatcagtcgatg
aaggtagtgagtgcatttaccattgacacagaggacaaactcaagggctttattgaccgc
atatataagaatgccattgaataccctacctacgctgatgtctacgccaaggtgtgccac
catcaccaactcatggggctgaaagtacccggagtgacagtacctttccgcaagctgcta
ctgaaccgatgccagaagggctttgagaaagacaatagtaagatcttaaaggatatgcag
agagaactggacgcgatcactgagaaggaggaccgacagcgactgagtgaggggctggag
gagacgaaggcagaggggcaacgggagttgctttgcaacatcaagttcatgtgcgagttg
ttcaagctaaagatgattatggagaccgtcatgcacaactgcattgtaaagctactaaag
aatggtgatgatggttcactggagggcctgtgcacattactcttcaccatcggcaaggac
ttagaggaggattctcaggaggctgagcccagaatggatcagcactacaagcagattgtg
gtgatcattaagaaaaagaggacgtcccccagaatccgctacatgctgtgtgatgcgatg
gacctcagagagctcaatttggagaaaaataaagacaattga
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