Oncorhynchus tshawytscha (Chinook salmon): 112215715
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Entry
112215715 CDS
T05605
Name
(RefSeq) poly(rC)-binding protein 4 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112215715
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
112215715
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
MOEP19
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
112215715
NCBI-ProteinID:
XP_024230798
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Position
LG16:44112136..44169930
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AA seq
468 aa
AA seq
DB search
MRLPVCNSHITMNCVQDFGDGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARV
NISEGSCPERIITITGSTDCVFRAFTMITYKLEEDLTTLVANGTISNKPPVTLRLVIPAS
QCGSLIGKGGAKIKEIRESTQAQIQVAGDLLPNSTERGVTILGSQDSVIQCVKLICTVIL
ESPPKGATIPYRPSPSPGALLISGNQVFEASDFSPHPLYSLSQGGLDLHQSDLFQAYSVP
NQYGIPHTELAKLHQLSMQQNMQQSPMCQPTTTVLPGMDSNSQTSQELLIPNDLIGSIIG
RQGTKINEIRQVSGAQIKIGSQLDGTNDRHVTITGTPVSINLAQYLITSCLETAKSTAQA
ASMATPNMADLNMVFTHPAPPASSPHRLHSGSHGYPLSPTPIMGHPYGALPFSSLLGVKS
VPFLTLSSPAPQVAVTAAPSHASLAAYTTKISSANCIKKPDRQKFAPY
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctccctgtgtgcaactcccacattactatgaactgtgtgcaggactttggagac
gggggcctgggtgtgaccctcaccctccgactgctcatgcacggcaaggaggttggcagt
atcattggcaagaaaggagagacggtgaaaagaatacgggaggagagcagtgcacgagtc
aacatttcagagggatcatgtccagagaggatcatcacaatcaccggctctacagactgt
gtcttcagggcattcaccatgatcacatacaaactggaagaggacctcaccacactggtg
gccaacggtaccatcagcaacaagcccccagtgaccctacgactggtcatcccagccagc
cagtgtggctccctcattggcaagggaggggcaaagatcaaggagatcagagagagcacg
caagcgcagatacaggtggcaggagatttgctgcccaactctactgagcgaggggtgacg
atattggggagtcaggactcggtaatccagtgtgtcaagctcatctgcactgtaatcctg
gagtctcccccgaagggtgctaccattccctaccggcccagcccctccccaggagccctc
ctcatctctggcaaccaagtgtttgaggcatcagacttttccccccaccctctgtactct
ctctcccagggtggtcttgacctgcatcagagtgatctcttccaggcctactctgtacca
aaccaatatggcattccacatacagagttggccaagctacatcagctatccatgcagcag
aacatgcagcagagtcccatgtgccagccgactacaaccgttctccctgggatggactca
aactcccagacatcgcaggagctccttattccaaatgacctgataggctcgatcatcggc
cgacagggcactaagatcaatgagatcaggcaggtgtcgggggctcagataaagatcggc
agccagctggacggaaccaatgaccgacacgtgaccatcactggcacaccagtcagcatc
aacctggctcagtacctcatcacatcctgtttagagacagctaaatccacggcccaggca
gcctccatggccacccccaacatggctgaccttaatatggtcttcacacatcccgctccc
ccggcctcctccccacaccgcctccactctggcagccatgggtaccctctctcccccacc
cccatcatgggccacccctacggcgccctacccttctccagtctgttaggggtcaagtct
gtccccttcctgactctctccagccccgccccccaggtcgctgtcaccgccgccccttcc
cacgcctccctggcagcctacactaccaaaatctcctcggccaactgcatcaagaaaccc
gacaggcagaagtttgcaccctactga
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