Oncorhynchus tshawytscha (Chinook salmon): 112215752
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Entry
112215752 CDS
T05605
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 3-like isoform X1
KO
K05722
FYVE, RhoGEF and PH domain containing 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112215752
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112215752
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
112215752
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
PH_9
FYVE_2
Motif
Other DBs
NCBI-GeneID:
112215752
NCBI-ProteinID:
XP_042155155
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Position
LG16:complement(46489701..46582192)
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AA seq
926 aa
AA seq
DB search
MQGVSATTDLPPSSLQCQCGSVDFLCSPRLAKKALPPPRQCHVRPAVKPRPQPTATPTSQ
KPQVPPKPPFLLVLGQDKKPKRIPPAPSRPLPAPPPPPKPRPSQTPPGLVTQPQRGPEAQ
SVGLLIERFENSRVPILGVPPRNQLHLCLSMDATSETTARSAPDPIAHASSGSAGAKDSG
EPSPADKLALLVSEQTDEVTELTDLSCLASLRIDGPGGIPLDSTEDDLNIVHGDRVGCLD
NTEREERDSSHELQDNPDSQSSEQNGNGKIPNRDSGIDSPSCAAEGEVFPNEDAIDEEER
YDSVTETETSVSCCVTLGNKRDSTQDEDSDLDEVSSGETEGGEKADTHTEVHRYSETQRL
LNIARELLHTEEAYVKRLNLLDQVFCTKLTEAGIPQDVITGIFSNISSIYCFHHKFLLPE
LKTRITGEWDSNPRIGDILQKLAPFMKMYGEYVKNFDRAMDLVNTWSQRSSQFKSVVQNI
QKQDVCGNLTLQHHMLEPVQRIPRYELLLKDYLKKLPDDALDRKDTEKALELISTAANHS
NAAIRKMEKMNKLLQVYERLGGEEDIVNPANELIKEGHIKKMSAKNGTAQDRYLYLFNNM
VLYCVPKLRLMGQKFSVRERIDIAGMEVRKEVQENVKQNLPHTFAIIGKQRSLELQARTA
EEKEDWIQVILATIEKHKQNSETFNKAFNSSFSRDEDHLPDSPGPWSSTSVDSDSERLQE
RKSSKKKEKETCKGCNESFNFTKRKHHCKACGAAICGKCSKMLENKTCRVCPECFETSQG
PEGPAGAPVELKRKATAEKQVSLSGDNCLLCAQLQVQEKGKSWTKTWVAITKTEPLVLYL
QTSGQDSRGARAIPLPGYEVSVVAPSATEKSELKHAFQLSHSQQALLFSAQDTEVQAKWV
ELLSRAARGETPTDTPFSLTEHRESQ
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggtttcagcaacaactgacctccctccctcttctctacagtgccagtgtgga
tcggtggacttcctgtgttccccgcggctggcaaagaaagccctgccccctcccagacaa
tgtcacgtccggcctgcagtcaagccccgcccccagcccacagccacacccacctctcag
aaacctcaagttccccctaaaccccccttcctgctggttctcggacaggacaagaagccc
aagaggattcccccagctccctccaggcctctgcctgcccctccacctccacccaaaccg
cggcccagccagacaccacctggcctggtcacacagcctcagagaggcccagaggctcag
agcgtggggctgctcatcgaaaggtttgagaactccagggttccaattcttggtgtccct
ccgaggaatcagctccacttgtgcctgagtatggacgcgacatccgaaaccacagctcgt
tctgcccctgaccccatagcacacgcctcttcagggtcagcaggagcaaaggactctggg
gaaccctcccccgccgacaaacttgctcttctcgtctcggagcagactgatgaggtcacc
gagctgacggatctttcgtgcctggcctcactccgcattgacggccccggcggcattcct
ttggactctacagaggacgacctcaacatcgtccacggcgatcgagttggttgccttgac
aacacagagagggaggagagagactcttcccatgagctccaggacaatccggactcacag
tcctcggagcagaacggaaacgggaagattcccaaccgggacagcgggatcgacagccca
tcttgcgcagcagagggcgaggtgttccccaacgaagacgccatcgacgaggaggagcgc
tacgacagcgtcacggagacagagactagcgtgtcctgctgtgtaacactgggcaacaag
cgtgactccacgcaggacgaggacagtgacctggatgaggtcagcagtggcgagacagag
ggaggggagaaggcggacacacacacagaggtacacaggtactcagagacacagaggtta
ctgaacatcgccagagagctccttcacactgaggaggcctatgtcaaaagactcaacctc
ctagaccaggtattttgcactaagctgactgaagctggaatccctcaggacgtgataacg
gggatcttctccaacatctcctccatctactgcttccaccacaagttcctgctccctgag
ctcaagacacgcatcactggagaatgggactcaaacccacgtattggagacatcctccag
aagctggctccatttatgaagatgtacggagagtacgtgaagaactttgaccgtgctatg
gacctggtcaacacctggagccagcggtcatcacagttcaagagtgtggtccagaacata
caaaagcaggatgtgtgtgggaacctgactctccagcaccacatgttggagcctgtgcag
aggattccacgctacgaactcctgctcaaggactatctaaagaaactgcctgatgatgca
ctggacaggaaggacacagagaaagcactggagctcatatccacagcagccaaccactcc
aatgctgccatcaggaaaatggagaagatgaacaaactgctgcaggtctatgagagactg
gggggagaggaggacattgtgaacccagccaatgagctcatcaaagaaggacacatcaag
aagatgtctgccaagaatgggacggcccaggaccgatacctctacctgttcaacaacatg
gtgctgtactgcgttcccaagctgaggctgatggggcagaagttcagtgtgagagagagg
atcgacatcgctgggatggaggtcaggaaagaggtgcaagagaacgtgaagcagaacctc
cctcacacgttcgccatcatcggcaagcagcgctcactagagctacaggccaggacggct
gaggaaaaggaagactggatacaggtgatcctggccaccatagagaagcacaagcagaac
agtgagacctttaacaaagccttcaatagctccttctccagggacgaagaccacctgcca
gactcaccgggtccctggagcagcacatccgtagactcagacagtgaaagactgcaagaa
aggaaaagttccaagaagaaggaaaaggagacatgtaaaggctgcaacgagagcttcaac
tttaccaagcgcaagcaccattgcaaagcctgtggagcggccatctgtggtaaatgctct
aagatgttggagaataagacgtgtcgtgtgtgtcctgagtgctttgagactagccagggc
cctgaggggcctgcaggggccccagtagagctgaagaggaaagctacagccgagaagcag
gtgtctctgtcgggggacaactgtctgctgtgtgcccagctgcaggtgcaggagaagggc
aagagctggaccaagacctgggtggccatcaccaagactgaaccactggtgctctacctg
cagaccagcggacaggactctcgcggggcacgggccataccccttccggggtatgaggtg
agcgtagtagcaccatcggcaacagagaagtctgagcttaagcacgcgttccagctgagt
cactcccagcaggctttgctgttcagcgcccaggatacagaagtccaggccaagtgggtg
gagcttctctctagagccgcccgcggggaaacgcccacagacacgcccttcagcctgacg
gagcacagggaaagccaatag
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