Oncorhynchus tshawytscha (Chinook salmon): 112215766
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Entry
112215766 CDS
T05605
Name
(RefSeq) peroxisome proliferator-activated receptor gamma-like isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03320
PPAR signaling pathway
otw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112215766
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
112215766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112215766
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112215766
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112215766
Nuclear receptors [BR:
otw03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
112215766
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112215766
NCBI-ProteinID:
XP_042155163
LinkDB
All DBs
Position
LG16:complement(47189041..47196043)
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AA seq
652 aa
AA seq
DB search
MDNKMNSFDMETLSTLDYPYLPSLEYSHNSSHHHSSDRSHSFNHSSDRSHSFNHSPDRSH
SFNHSPDRSHSCNHSPDRSHSFNHSSDRSHSCNHSSDRSHSFNHSSDRSHSFNHSSDRSH
SCNHSSDRSHSCNHSSDRSHSFNHNRSHSFNHSPDRSHSFNHSPDRSHSFNHSPDRSHSF
NHSPDRSHSFNHRSDRSHSFNHSPDRSHSFNHSPDRSQSFNHSPNRSQSFNHSPNRSQSF
NHSPDRSHSINHSPDRSHSYNYTYSVYQHASSPLNIDCRVCGDTASGFHYGVHACEGCKG
FFRRTVRLKLVYDHCELHCRIHKKSRNKCQYCRFQKCLLVGMSHDAIRFGRMPQVEREKL
QAEFMDVHPRNPESADLRALSRQLCLSYHRHFPLTKSKAKAILSGKTHGNSPFVIHDMKS
LTAGQYFINCRQLPVLECQRSVLPPEEPAGELELSVFRRIQIRSAEAVQEVTEFSKSIPG
FTELDMNDQVILLKYGVIEVMTTMLAPLMNKDGTLFAYGQIFMTREFLKSLRKPFCEMME
PKFEFAVKFNVLELDDSDMALFFAVIILSGDRPGLVNVKPIEDLQETVLQALELQLKTIH
PDCPQLFAKLLQKMTDLRQLVANHVRLIHLLKKQELEVCLHPLLQEIMRDLY
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggacaacaagatgaatagttttgacatggagaccctgtcgacgctggactacccttat
ctcccttctctagagtacagccacaacagttcccatcaccacagctcagacagaagccac
tcattcaaccacagctcagacagaagccactcattcaaccacagcccagacagaagccac
tcattcaaccacagcccagacagaagccactcatgcaaccacagcccagacagaagccac
tcattcaaccacagctcagacagaagccactcatgcaaccacagctcagacagaagccac
tcattcaaccacagctcagacagaagccactcattcaaccacagctcagacagaagccac
tcatgcaaccacagctcagacagaagccactcatgcaaccacagctcagacagaagccac
tcattcaaccacaacagaagccactcattcaaccacagcccagacagaagccactcattc
aatcacagcccagacagaagccactcattcaaccacagcccagacagaagccactcattc
aaccacagcccagacagaagccactcattcaaccacaggtcagacagaagccactcattt
aaccacagcccagacagaagccactcatttaaccacagcccagacagaagccaatcattt
aaccacagcccaaacagaagccaatcatttaaccacagcccaaacagaagccaatcattt
aaccacagcccagacagaagtcactcaatcaaccacagcccagacagaagccactcatac
aactacacatacagcgtgtatcaacacgccagctctccgctcaatattgactgtagagtg
tgtggggacacggcttcaggcttccactatggcgtccatgcctgtgagggttgcaaggga
ttcttccgcagaaccgtgcggttaaaactggtgtatgaccactgtgagctgcactgtcgg
attcacaaaaagagccggaataagtgccagtactgtcgctttcagaaatgtctgcttgtg
ggcatgtcacacgatgccatccgcttcggccggatgccccaggtggagagagagaagctg
caggctgagtttatggatgtgcaccccaggaacccagagtcagcggacctgagagccctg
tccagacagctgtgcttgtcctaccacagacactttcccctgaccaagagcaaggccaag
gccatcctctctggaaagacacacggaaactcaccgtttgtcatccatgacatgaagtct
ctgacggcgggtcagtactttataaactgtagacagctcccagtactggagtgccagagg
tccgtcctgccccctgaggagcctgctggggagctggagctctccgtcttccgccgcatc
cagatccgctccgccgaggccgtacaagaggtcacagagttctccaagagcatccctggg
ttcacagagctggacatgaacgaccaggtgatcctgctgaagtacggggtcatcgaggtc
atgacgaccatgctggcgccactcatgaacaaggacggcacactgtttgcctatggacag
atcttcatgacccgagagttcctcaagagcctgaggaagcccttctgtgagatgatggag
cccaagtttgagtttgcggtaaagttcaacgtgctggagctggacgatagtgatatggcg
ctcttcttcgccgtcatcatcctcagtggagaccgtccaggcctggtgaacgtgaagccc
attgaggacctccaggagacagtgctgcaggccctggagctgcagttgaagaccatccac
ccagactgcccccagctgttcgccaagctactgcagaagatgaccgacctgcggcagctg
gtggccaaccacgtccgcctcatccacctgctcaagaagcaggagctggaggtgtgtctg
catcccctactgcaggagatcatgagagacctgtactaa
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