Oncorhynchus tshawytscha (Chinook salmon): 112215823
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Entry
112215823 CDS
T05605
Name
(RefSeq) serine/arginine-rich splicing factor 6
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112215823
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112215823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112215823
Spliceosome [BR:
otw03041
]
Common components
Common spliceosomal components
SR proteins
112215823
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
DbpA
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
112215823
NCBI-ProteinID:
XP_024231009
LinkDB
All DBs
Position
LG16:49751616..49755488
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AA seq
335 aa
AA seq
DB search
MPRVYVGKLSYHAREKDLQRFFNGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVTVEHARGPRRDRDGYSGGGGGRSSSGYSSSRSRTGRDKYGPPVRTEYRLIVENLS
SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFGSRSDMRRALDKLDGTDINGRKIRL
VEEKSRRRRSYSGSRSRSRSRRRSRSRSSRSRSNSRSRSHSRSKRRRSRSGRKSRSCKSR
SRSHTRKSRSRSDKSKSRSKSRSKVKSERDSSSPSKEKLTSKKSRSRSASPMGNGKEEPS
SRSPSPAADRHSKSPDKRPVSRSPSRSRSRSASQD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcgtctatgttggaaaactaagttatcatgctcgagaaaaagaccttcagcgg
tttttcaatggctacggaaagcttatggaaattgatctgaaaaatggatatggatttgta
gagtttgaggacaatcgcgatgcggatgacgctgtgtatgaactgaatggcaaggagttg
tgcggggagcgtgtgaccgtggaacatgcaagaggaccgcggcgcgaccgagatggatat
agtggtggcgggggtggtcgcagtagtagtggttacagcagcagcagaagccgcactggc
agggataagtacgggccacctgtccgtaccgagtaccggctgatcgttgagaatctgtcc
agccgctgcagctggcaggatctgaaggatttcatgcgccaggctggagaggtcacgtac
gctgacgcccacaaggagcgtaccaacgagggtgtcatcgagttcggctcacgttcggac
atgaggagggccctggacaagctggacggcacagacatcaacgggaggaagatccgcctg
gtggaggaaaagtctcgccgccgccgctcctactctggcagccgctccaggtctcgcagc
agacgtcgctctcgtagcaggagcagccgctccaggagtaactccaggtcccgatcccat
tctcgcagcaagagacgtcgctctagatctggaaggaagtcccgttcctgcaagtctcgt
tcccgctctcacacccgcaaatccagatcccgctccgacaaaagcaagtcccgttccaag
agccgttccaaggtgaaatccgagcgggattccagcagcccttccaaggagaagttgacc
agcaagaagtcacgtagccgctcggcgtcccccatggggaatgggaaggaggagccgtcc
tctcgctccccgtctccagcagctgaccgccactccaagtctccagacaagcgtcctgtc
tcccgctccccatctcgctccaggtctagatcagcttcccaagattaa
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