Oncorhynchus tshawytscha (Chinook salmon): 112215893
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Entry
112215893 CDS
T05605
Name
(RefSeq) coiled-coil domain-containing protein 22
KO
K23343
coiled-coil domain-containing protein 22
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112215893
04121 Ubiquitin system [BR:
otw04121
]
112215893
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Others
Others
112215893
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Multi subunit type E3 associated proteins
112215893
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CCDC22_CC
CCDC22_N
HTH_32
RsmF_methylt_CI
Hemerythrin
Motif
Other DBs
NCBI-GeneID:
112215893
NCBI-ProteinID:
XP_024231130
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All DBs
Position
LG16:52544693..52553060
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AA seq
639 aa
AA seq
DB search
MDEVDKILIHSLRQTGTDVGKDVQSVKHFTSELIVEAVVRCLRVIDPALGSGLCPSLPPG
MSARFRVGMSLAQACQDLGYKGEIGYQTFLYSNEPEIRSLLMFLVEKLPRESAEASDQPA
GKSALLQKSIAAQIKAQLALPWLSPSCRLPLLCKTQNPGPSHSFHSQTLSLPHCLKVPGK
KQLKEENDYHRDFLPPVTAQPSQHASVPASLLEQHAGELSAAQEWENEWNSQGLLSRLTP
EEYRSRKRARLQKRIEEQLRTAAQTRPDTLGAHVSGSDLTELLQSFGGSPLIGDILAKGT
RFTHTEKFTFTEEPEKAAKQMAAAANSLPSSHQSEEDLQARQQEELASLQQQLQQLSLSL
EEVGGDMRQLTVSIHQVSDELKQKELSNTEEEDSVRVKKQTIYLLPDGENNLAKLQALVE
GSAERVVNLAAQWEKHRAPLIDEHRRLKELCSNQEMESSRKLSEIKELHEKISQSAEEAK
KKEGLYKQLITEFENLAKDISRSAYTARILEIVGNIRKQKEEITKILSDTKELQKEINSL
TGKLDRTFAVTDELVFKDAKKDESVRKSYKYLAALHENCTQLIQTIEDTGTIMREIRDLE
EQIDTENGKKTVSNLEKILEDYKAIRQENSALAAKIREA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagttgataagattttaattcactcgcttagacagactggcacggacgtgggg
aaggatgtgcagagtgtgaagcacttcaccagtgagctgatagtggaggcggtggtgaga
tgtctgcgagtgatcgacccggccctgggaagcggactgtgcccctccttacccccaggc
atgtctgcccgcttccgtgtgggcatgagcctggcacaggcctgtcaggaccttggctac
aagggagagattggctaccagacctttctgtacagcaatgagccagagatccgctccctg
ctcatgttcctagtggagaagctgcccagagaaagtgctgaggcctcggaccaaccagca
ggtaaatcggccctcctccagaaatccatagctgcccagattaaagctcagctggccttg
ccctggctctctccatcctgcagactacccctcctctgtaaaacacagaacccaggaccg
tcccacagtttccactctcagacccttagtttaccccactgcctcaaagtgcctgggaaa
aagcaattgaaagaggaaaatgactaccacagggacttccttccccctgtaactgcccag
ccgtcgcagcatgcctccgtgccggcctccctgctggagcagcatgcgggggagctcagt
gccgcccaggagtgggagaacgagtggaacagccaaggcctcctttcccgcctcacaccc
gaggaatatcgctccaggaagcgtgctcgtctgcagaagcggatcgaagagcagctgcgc
actgcggcccagacccgcccggacaccctcggtgcccacgtgtcaggctctgacctcaca
gagctgctgcagtccttcgggggctctcccctcattggtgacatcctcgccaagggcacc
cgcttcacccacactgaaaaatttactttcacagaggagcctgagaaagctgccaagcag
atggcagcagcggccaactccctccccagctcacatcagtcggaggaggatctgcaggcc
cgacagcaggaggagctggcctccctgcagcagcagctacagcagctctccctcagccta
gaggaggtgggcggagacatgaggcagctcactgtgtccatacatcaggtgtcagatgag
ctgaagcagaaagagctgagcaacacggaggaggaggactctgtccgggtaaagaagcag
accatatacctgctgccggacggggagaacaacctggccaagctgcaggccctagtggag
ggaagtgccgagcgagtggtcaacctggccgcccagtgggagaaacacagagctccactt
atcgatgagcaccgcaggctcaaggagctctgcagcaaccaagagatggagtcctcccga
aagctatctgaaatcaaagagcttcatgaaaaaatcagtcaatctgcggaggaggccaag
aagaaggagggactgtataaacaactgataacagagtttgagaatctcgccaaagatatc
tcccgctcggcgtacactgccaggatcctggagatcgttggcaacatccggaaacagaag
gaagaaattacaaagattctgtctgacactaaggagctgcaaaaagagattaacagcctg
actggaaaactggaccgaacgttcgctgtgactgatgagctggtcttcaaggatgcgaaa
aaagacgaatctgtccgcaaatcctacaagtacctggcagccttgcatgagaactgcact
cagttgatccaaactattgaggacactggcacaatcatgagagagatcagagacctggag
gaacagattgacacagagaatggtaaaaagactgtaagcaacctggagaagatcctggag
gactacaaagccattcgccaggagaactctgctctggctgccaagatcagagaggcctga
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