Oncorhynchus tshawytscha (Chinook salmon): 112215972
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Entry
112215972 CDS
T05605
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00310
Lysine degradation
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112215972 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112215972 (prdm2a)
03036 Chromosome and associated proteins [BR:
otw03036
]
112215972 (prdm2a)
Enzymes [BR:
otw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
112215972 (prdm2a)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
112215972 (prdm2a)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112215972 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2HE
zf-C2H2_2
zf-C2H2_jaz
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
112215972
NCBI-ProteinID:
XP_024231269
UniProt:
A0A8C8JPW9
LinkDB
All DBs
Position
LG16:complement(56432578..56450765)
Genome browser
AA seq
1478 aa
AA seq
DB search
MEDSHTLYISELGDDDNLEEEMEDKELEETHCSLYLMSMETDELADSNTSCQKPEAKGCD
LKQDLGSVSHSATPELPEDPDHDPDVELQDSFPCQFCERNFTSKQGLERHIHIHTLANHH
THIFKCKYCSKSFGSKIGRRRHERRHENAKARPGSLIKPVEPPSSALQRNGPECVSSPSS
SSASVLADREQASTSDEHGELQGGHTCKYCKKVFSTHTNMRRHQRRIHERHLRLKGKEAP
LLQEAKHPKLPPIKSQQDTNNTSPVAVLEIESDQEEQYMLDISGNISENLSFYIDGKIVS
TSTVSGCEVVEVNSGSATLVGLNAVIINPAQISQALKVETATHTGKGIPGQPLTKRRTAT
PPLLPQIKTELESEVLSSSSSSIVSSLIESLIPQNTESTILQRERTVYLSPKLKQLLQMQ
DGLKPSFALITEGQKLCSPLSLTVLPAGLGRFKRRTGSPPNSPQQSPMSNVESTTTDVGV
SIAVNVPTSESQCSSPACSLSSNDESEISNSPPVNDAMTTRVLPEGWSPMSGGCSCNQQP
LDLSNAVKKSEDEALREAVLDLSVHRKIADSEAKRILVPQPLNKKRKPNTSMLEKVLMNE
YANLEVAAEQELSILENHNAPLVTDFAIVTASDMSPATEGEVFGLTFPSAALTPSPSSLA
SVPRQSISPCTIALASPSPHPILPTAPSLITVLAPPTSSSSNSTNQPILQVLASKISPNP
LIICTEDSLNSAECEWRAALPDWATSNSASQLAISKPLDPTLNLQGHVFLTDHTLNQIAL
NTTTVESNIGFEVPTCSPALTLNDSLINSFDITSNTVLIECTVALETPENHVPTTIDFQE
NNFESTAPVQIVINQQQPLSLPHETVDPSILVSSLEQSVTLSTLSAVISECPTRQESISS
PVPAIIKTESNQKVVSEDISICPSKTPPPSEGTSQVEESSNETLSKLQETFTKEFICNVC
DKLFHSMKELGHHVSEHSDEWPYKCEFCVLLFGKPTALLDHRSTLHGVGKSYVCCACTKE
FAYLCNLKHHQKELHPGRECKYTEEENGKLRPQNYNNATKGSTEALSYCAMAESNKPVIK
DEGELDDATEELFTTIKIMASEGGKPKGLDVCLGINQHYPSFKPPPFPYHNRTPVGSVAS
ATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPNKNPIPLRHF
AKAQNGVLSSTNSTNGQNALHTASQTNRPKLNQEPPAKLKLNALNKRKKQLVQRAISQRS
KSTSLTKRTSSLVDEEQEIYVCPHCIREFTYRRSRTKHMAVCPRKPAAKEAKKRKDGSIS
YTKENNGHLRREVLHLEEKSDHEQKSRAHSSSPTKRTAILPAHKVLSNKKSKAIIAMASV
QTLKEAPKLTALSLVRPFNSPQRQGSRMQHGVKEIRSNITMVKSHQQPPQVDEHPCSQSG
RVRGPVTRSLQQIVVTDSAKEEQLTSQEPPGDLQDPSI
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggaagactctcacactttatacatctcagagttgggagacgatgacaatttagaggag
gagatggaggataaggagcttgaggaaactcactgcagtctttatttaatgtccatggaa
acggatgagctggcagattcaaacacaagttgccaaaaacctgaggccaaaggctgtgac
ctgaagcaggatttaggatcggtctcccattcagcaacccctgagctcccagaggatcct
gaccatgaccctgatgtagagctccaggactcatttccctgccaattctgtgaaagaaat
tttaccagcaagcaaggcttagaacgtcacatacacatccacaccttagctaaccaccac
acacacatatttaagtgtaagtactgcagcaagtcctttggctcaaaaattggccggcga
cggcatgagaggagacatgaaaatgcaaaggcaaggcctggatctttaataaagcctgtg
gagcctccaagttctgccctacagcgcaacggtccagaatgtgtgtcttctcccagtagc
tccagtgcctctgttttggcagacagagaacaggcgtctacgtcagatgaacatggagaa
ttacagggtggtcacacttgcaagtattgcaaaaaggtttttagcacgcatacaaacatg
cgacgacatcagcgcaggatccacgagcgccatctccggctcaaaggtaaggaagcccca
ctgttgcaggaagcaaaacatccaaagctaccccctattaaatctcaacaggataccaac
aacacaagcccagtagcagttcttgagatcgaaagtgaccaagaggagcaatatatgctg
gatatctctggtaacatctctgagaacctcagcttttatatagatgggaagattgtatca
acaagcactgtcagcggctgtgaggtagttgaagtgaactctggatctgctactttagtc
ggactaaatgctgtgattattaatcctgcccagatcagtcaggctcttaaagtagagact
gctactcacacaggaaaagggatacctggtcaacccttgacaaaaaggagaactgccaca
ccacctcttctaccccaaatcaaaacggaactagaatcggaagttttgtcctcttcttca
tcatcaattgtgtcatctttgatagaaagtctcattcctcagaacacagagtctactatc
cttcagagagagagaacagtttatctgtcacctaagctgaaacagctcttacagatgcaa
gatggcctcaaacccagctttgccctgatcacagaaggccagaagctgtgttcaccactt
tccctgactgtcctcccagcaggattggggaggtttaaaagaaggaccgggtctccccca
aactcaccacaacaaagccctatgtcgaatgttgaaagcacaacaaccgatgtgggtgtt
tctattgctgtcaatgtcccaacgtcagagagccaatgcagttcacccgcatgcagttta
tccagcaatgatgagagtgagatctccaacagtccaccagtaaacgatgcaatgacaact
cgtgtcttgccagagggatggtccccaatgagtgggggttgttcctgcaaccagcaacct
ttggacctctcaaatgctgtcaagaaaagtgaagacgaagccctgcgggaagctgtgttg
gacttgagtgtgcatagaaagattgcagattcggaagcaaagagaattttagttccacag
cccttaaataaaaagaggaagccaaacaccagcatgttggagaaggtgctgatgaatgag
tacgcaaacctagaggttgctgcagagcaagaattaagtatattagaaaatcataatgca
ccgttagttacagactttgccatagttactgcttcggatatgtcacctgctactgaaggc
gaggtgttcggattaacttttccctctgcagcacttactccatccccttcctctctagct
tcagtccccaggcaatcgatctcaccatgcaccatagcacttgcttccccatctccacat
ccaatcttacccactgctccgtcgctaattactgttttagcaccaccaacatcttcctct
agcaattccacaaatcaacctatccttcaagtattggcctctaagatttctcctaatcct
ttaataatctgcacagaagattcattgaattcagctgagtgtgagtggagagctgctttg
ccagattgggctacctctaattctgcaagccaacttgccatctctaaaccccttgaccca
actctcaatctacaagggcatgtgtttctcacagatcacactttaaatcaaatagctctg
aacactaccacagttgaatccaacattggatttgaagtgccaacatgctctccagcttta
actctaaacgattcccttatcaactcctttgacattactagtaatactgttttaattgaa
tgcacagttgctcttgaaaccccagagaaccatgtccctaccacaattgatttccaagag
aataattttgaatccacagcacctgtgcaaattgtcataaatcagcagcagcctctgtcc
ttgcctcatgaaaccgttgacccttctattttagtatcttctttagagcaatcggttacc
ctttcaacgctgtctgcagtcatatctgaatgtccaactcgtcaagaatccatttcctcc
cctgttcctgccattattaaaacggaatcaaaccaaaaggtagtatcggaggacatatct
atctgcccctctaaaacgccacctccctctgagggcacaagtcaagtggaagaatcctca
aatgagaccctctccaagctacaagagactttcactaaggaattcatatgcaatgtatgt
gataagctttttcattcaatgaaggaactgggtcatcatgtaagtgagcattctgatgaa
tggccatacaaatgtgagttctgtgtgctactctttggaaagcccacggcattgcttgat
cacaggtcaaccctccatggcgtcggcaagagctatgtttgctgcgcatgtacaaaggaa
tttgcttatctttgcaacctgaaacatcatcaaaaggagttgcaccctggccgggaatgc
aaatacacagaggaagaaaatggcaagctacgaccccagaactataacaatgcaacaaaa
ggtagcacagaggctttgtcctactgtgccatggcggagtccaataaacctgtcataaaa
gatgagggagaattagatgacgctactgaggaactctttaccacaataaagataatggct
tctgagggaggcaaacccaaaggcctggatgtttgccttggcatcaaccaacactatccc
agttttaagccgcctccgtttccatatcacaaccggacacctgttggctctgtagcctca
gctaccaacttcaccacccacaacatcccacaaaccttcagcactgctatccgatgcact
aaatgtggcaaaagctttgataacatgccagagctgcacaaacacattcttgcctgtgca
aatgccagtgacaaaagacgctacacacccaataagaaccccattcctcttcgtcacttt
gcaaaagcccaaaatggagtactgtcctctactaattccacaaatggccaaaatgctcta
cacacagcaagtcaaacaaatcgtcccaaactcaatcaggagccacctgccaagttgaag
cttaatgcactcaacaaaaggaaaaaacagctggtacagagggccatttcacagaggagt
aagtctacctctttgacaaagagaacctcttctctagtcgatgaggagcaagagatctat
gtctgtccacattgcattagagaattcacataccgccgcagccggaccaagcacatggcc
gtctgccccaggaaacctgctgccaaagaggccaagaaaagaaaagatggcagtatctct
tacactaaggaaaataatggccaccttcgcagagaagtccttcatttggaagagaaatct
gaccatgaacagaaaagcagagcccatagttcaagtccaacaaagaggacagccatatta
ccagctcataaagtcctgtcaaacaaaaaaagtaaagccatcattgcaatggcaagtgtc
caaacactgaaggaggcacccaaactgactgcactgtctcttgttcgccctttcaactcc
ccacaacgtcaaggcagtaggatgcagcatggtgtgaaggaaattcgttccaacattaca
atggtgaaatcccaccaacaaccaccacaggtggatgagcacccctgcagtcagagtgga
agggtgaggggaccagtgacccgcagtctacagcagattgtcgtcacagattcagcaaag
gaagaacagctgaccagtcaggagccaccaggggatctgcaggatccttcaatttga
DBGET
integrated database retrieval system
