Oncorhynchus tshawytscha (Chinook salmon): 112215999
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Entry
112215999 CDS
T05605
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112215999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112215999
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
112215999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
112215999
NCBI-ProteinID:
XP_024231314
LinkDB
All DBs
Position
LG16:complement(58081503..58117556)
Genome browser
AA seq
1848 aa
AA seq
DB search
MQQQQRLAQQQHQKQTESTKTKSMFLSRALEKILSDKEVKRSQHSQLRKACQVALDEIKI
ELEKQKDGTVVPPRANYIEADKYVLPFELACQSKSPRIVSTSLDCLQKLIAYGHITGNAP
DSSAPGKRLIDRLVETICNCFQGPQTDEGVQLQIIKALLTAVTSPHIEIHEGTVLLTVRT
CYNIYLASRNLINQTTAKATLTQMLNVIFTRMETQAALESHEQEKDRLCLPHQNPSTSPG
RICGSPRSDRTQDLSGTPSPAASTPDLHTTPLAPDTPSINGQPEECKTEEDVAVTEEKRE
ETPPPVFEDPVSETPITVKQPVEEGHEVGQGEKSEVGGDEKPEVDSKPTEQPTSEEVAPA
PEPESQPQTAPEGDHLPEQTEVVPPRPRTDTNQMNGIMDDRGSVSSTDILDAESMQGGQN
TARFSHILQKDAFLVFRSLCKLSMKPLADGPPDPKSHELRSKVVSLQLLLSVLQGAGPVF
RTHEMFVNAIKQYLCVALSKNGVSSVPEVFELSLAIFLTLLSHFKVHLKMQIEVFFREIF
LTILETSSSSFEHKWMVIQTLTRICADAQCVVDIYVNYDCDLNAANIFERLVNDLSKIAM
GRSGQELGMTPLQELSLRKKGLECLVSILKCMVEWSRDMYVNPNLQANLGQERPSDGEGP
ELKLPDHLASRRDSVSSLDSTMSSSVQSSQPDHPEQYEVIKQQKDVIEHGIELFNKKPKR
GVQFLQDQGMLGNTAEDIAQFLHQEERLDTTQVGEYLGENVRFNKEVMYSYVDQLDFCGR
DFVSALRAFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTEFASADTAYVLAYSIIMLT
TDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSSIYDEIAGKKIAMKDRKEHTITPK
TSKHSVATEKQRRLLYNVEMEQMAKTAKALMEAVSHAQAPFFSATHLEHVRPMFKLAWTP
LLAAFSVGLQDCDDQEVASLCLEGIRCAIRITCIFSMLLERDAYVQALARFTLLTASSSI
TEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILRCISQLELAQLIGTGVKTRYISGVVRD
SQAGIKGFPIGGEEFMPLGLGTLVGGPDRRQMAHIQESVGETSSQSVVVAVDRIFTGSTR
LDGNAVVDFVRWLCAVSMDELASAHQPRMFSLQKIVEISYYNMNRIRLQWSRIWQVIGDH
FNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIVKKNRSPTIRD
MVIRCVAQMVNSQAANIRSGWKNIFSVFHQAASDHDENIVELAFQTTGHIVMITFQQHFA
AAIDSFQDAVKCLSEFVCNAAFPDTSMEAIRLIRHCAKYVAERPQALREYTSDDMNVAPG
DRVWVRGWFPILFELSCIINRCKLDIRTRGLTVMFEIMKSYGHTFEKHWWHDLFRIVFRI
FDNMKLPEQQTEKHEWMTTTCNHALYAICDVFTQFYEPLSEVLLADIFTQLQWCVRQDNE
QLARSGTNCLENLVILNGEKFSPEVWNVTCSCMLDIFQTTSPHALLTWRPAGQEEEAGDG
KHMDVDFDTQSQSSYDRALSERGGQSQMSTASDETWKGKPHARVSDQKLFAGLLIKCVVQ
LELIQTIDNIVFYPATSKKEDAENMAAAQRDTLEEAAEEGDPGQVEQGMYRHLSSQHLFK
LLDCLLESHTFARDFNSNNEQRTALWRAGFKGKSKPNLLKQETSSLACSLRILFRMYCDR
QLQDSWPDIQTRLLLVCSEALAYFISLTSESHREAWTSLLLLLLTRTLRLTDIKFKPHAS
CYYPHLCEMMQFDLIPELRAVLRRFFLRIGSVFHIAAPEMGQPQPPAP
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcaacaacgtcttgctcaacaacaacaccagaagcagacggaaagcacaaaa
accaagagcatgtttctgtctagggcgctggaaaaaatcctgtcggataaggaggtgaag
cggagccagcacagccagctgcgtaaagcatgccaagtggctcttgatgaaattaaaatc
gagcttgagaagcaaaaagatggcacagtggtcccgccccgagcaaactacattgaggct
gacaaatatgtgcttccttttgagcttgcctgtcaatctaagtccccacgcattgtcagc
acctcgttggactgcttacagaagctcattgcatatggccacatcacaggcaacgcccct
gacagtagtgctccagggaagaggctcatcgaccggctggtggagaccatctgtaactgt
ttccagggcccacagacagacgagggggtgcagctgcaaatcattaaggctctcctaact
gcagtgacctcccctcacattgagatacacgaggggactgttctactgactgtgcgtacc
tgttacaacatctacctggccagccgcaacctcatcaaccagaccaccgccaaggccacg
ctcacacagatgctcaatgtgatcttcacccgcatggagacacaggcggctctggagtct
cacgagcaggagaaggatagactgtgtttgccccatcagaacccttccacttcccctggg
cggatatgcggttctccccggtcagaccgcacccaagacttaagcgggacgccatctcct
gcggccagcaccccagacctccataccacgcccctggccccagacacaccctccatcaat
ggccaaccagaggagtgcaagactgaggaggatgtggctgttacagaggagaaaagggag
gagacaccacctccagtttttgaagatccagtttcagagaccccaataaccgtaaaacag
ccagtcgaggaagggcatgaggtggggcagggggagaaatcagaagtaggaggggatgag
aaaccagaagtcgattcaaagccaacagagcaaccaacgagtgaggaagtggctccagca
cctgaaccagagtcacagccccagaccgcaccagaaggggatcatctccctgagcagaca
gaggtggtgccccctagacccaggacagatacgaaccaaatgaatggcattatggatgac
cgtggttcagtgtcttctacagacatcctggatgcagagtctatgcagggtggccagaac
actgctcgtttctcccacatcctgcagaaagacgccttcttggtcttccgctccctctgc
aagctctccatgaagcccctggccgacggaccccctgacccaaagtctcatgagctgcgc
tccaaagtggtgtctctgcagctgctgctgtctgtgctccagggggcagggcccgtcttc
cgtacccacgagatgtttgtcaatgccatcaagcagtacctgtgtgtggccctctccaaa
aacggagtgtcctctgtgcccgaggtgtttgagctctccctcgccatcttcctcaccctt
ctctcccactttaaagtccacctcaagatgcagatcgaggtgtttttcagggagattttc
ctgaccattctggaaacatcgtccagctcctttgaacacaagtggatggtcattcagacc
ctcacacggatatgtgcagatgctcagtgtgtggtggatatctacgtaaactacgactgt
gacctgaacgctgcaaacatctttgagcggctggtgaacgatctatctaagattgccatg
gggaggagtggccaggagctggggatgacccctctacaggagctgagtctgcgtaagaag
ggtctggagtgtttagtgtccattctgaaatgcatggtggagtggagcagagacatgtat
gtcaaccccaacctgcaggccaacctcggccaggagcggccgtcagatggtgagggtccg
gagctgaagcttcctgaccacctggcgtctcgtagagacagcgtcagttctctggactcc
accatgtcatctagtgtccagtcctcccagcctgaccacccagaacagtatgaggtcatc
aaacaacagaaggacgtcattgagcacggcattgagcttttcaacaaaaagcccaagcga
ggtgtccagttcttacaagaccaaggcatgctgggaaacacagcagaggacattgcccag
tttctacaccaagaggagcgcctggacacaacccaggtgggggagtacctgggggagaac
gtgcgtttcaacaaggaggtgatgtacagctacgtggaccagctggacttctgtggccgg
gactttgtgtctgctctgagggctttcctggagggcttccggctccccggagaggcccag
aaaattgacaggctcatggagaagttcgctgcccgatatctggagtgtaaccagggacag
actgagtttgccagtgcagacacggcctacgtcttggcctactccatcatcatgctcacc
accgacctgcacagtccacaggtgaagaacaaaatgaccaaggagcagtacatcaaaatg
aaccgtggtatcaacgacagtaaggacctgcctgaggagtacctgtcctccatatacgat
gagatcgctggcaagaagatcgccatgaaggacaggaaggagcacacgatcacacccaag
actagcaagcacagtgtagccactgagaagcagcgtcgtctgctgtataacgtggagatg
gaacagatggccaagacagccaaggccctgatggaggctgtgagccacgcccaggctccc
ttcttcagcgccacccacctggaacacgtccggcccatgtttaagttggcgtggacccct
ctcctggcagccttcagcgtggggctgcaggactgtgatgaccaggaggtggcctctctg
tgtctggaggggatccgctgtgctatcaggatcacctgtatcttcagtatgctgttggag
agggatgcgtatgtccaagccttggctcggttcaccctgctcacagccagctccagcatc
actgagatgaagcagaagaacatcgacaccatcaagacccttatcactgtggcccacaca
gacggaaactacctgggcaactcttggcacgagatcctgcggtgtatcagccagctggag
ttggcccagctgattggcacaggggtgaagacacgctacatctctggagtggtccgggac
agtcaggctggcatcaagggtttcccaatcgggggagaggagttcatgcccctgggactg
gggaccctggtgggaggtccagacaggaggcagatggctcatatccaggagtctgtggga
gagaccagctctcagagcgtggtggttgctgtagacaggatcttcactggttccacaagg
ctggatggaaatgcagttgtggactttgtgcggtggttgtgtgctgtctccatggatgaa
ctggcctctgctcaccagccgaggatgttcagtctgcagaagatagtagagatctcctac
tacaacatgaaccgcatccgcctgcagtggtcacgcatctggcaggtcatcggagaccac
ttcaacaaggtgggctgcaaccccaacgaggacgtggccatctttgcagtggactctctg
aggcagctgtccatgaagttcctggagaaaggagagctggctaacttccgcttccagaag
gacttcctccggccatttgaacacatcgtgaagaagaacagatctcccactatcagggac
atggtgatccgctgtgtggcccagatggtcaactcccaggcagctaacatccgctccggc
tggaagaacatcttctctgtgttccaccaggccgcctcggatcacgacgagaacattgtg
gagctggccttccagactactggccacatagtcatgatcacgtttcagcagcactttgca
gcagccatagactccttccaggatgcagtgaagtgtctgtctgagtttgtgtgcaacgct
gccttccctgacaccagtatggaggccatccggctcatacgccactgtgctaaatatgtg
gctgaacggccgcaggctctgcgggagtacaccagtgatgacatgaacgtggccccaggg
gaccgggtgtgggtgagaggctggttccccatcctctttgagctgtcctgcatcatcaac
cgctgcaagctggacatcaggacgaggggtctgactgtgatgtttgagattatgaagagc
tatggacacacctttgaaaagcactggtggcacgaccttttccgcatcgtcttccgcatc
tttgacaatatgaagctccctgagcaacagacggagaagcacgagtggatgaccacgacc
tgtaaccacgccctgtacgccatctgtgatgtcttcacccagttctatgagcctctcagt
gaggtcctgctggctgacatcttcactcagctgcagtggtgtgtcagacaagataatgag
cagttggcccggtcagggactaactgcctagagaacctggtcatcctgaatggggagaag
tttagcccagaggtgtggaacgtcacctgctcatgtatgctggacatcttccagaccacc
agcccacacgccctgttgacatggcgaccagctggtcaggaagaggaggctggtgatggg
aaacatatggatgtagattttgacacccaatcccagagcagctatgacagagccctgtca
gagagaggaggtcagagccaaatgtccactgccagcgatgagacctggaagggtaaaccc
catgccagagtgtcagaccagaagctgtttgctggactgctcatcaagtgtgtggtgcag
ctggagctgatccagaccattgacaacattgtcttctacccggcaaccagcaagaaggaa
gatgccgaaaatatggctgctgcacagagggatactctggaggaggctgcagaggaaggg
gaccctgggcaggtggagcaaggcatgtacagacacctctcctcccagcaccttttcaag
ctgctggactgcctgctggagtcacacaccttcgccagagatttcaactctaacaacgag
cagaggactgcactctggagagcaggatttaaggggaagtcgaagcccaatctgctaaag
caggagaccagtagcctggcctgtagcctgcgtattctgttccgtatgtactgtgaccgg
cagctccaggactcctggcctgacatccagacacgactgctgctcgtgtgcagcgaggcc
ctggcctactttatcagcctaacctctgagagccacagagaggcctggacaagcctgctc
ctcctgctgctcaccaggactcttcgactgaccgacatcaagttcaagcctcatgcctcc
tgttactacccgcacctgtgtgagatgatgcagtttgacctgatcccagagctccgcgcc
gtcctacgccgtttcttcctccgcatcggctccgtcttccacatcgctgctcctgagatg
ggccagccacagcccccggcaccctag
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integrated database retrieval system